Viruses 2010, 2(9), 1867-1885; doi:10.3390/v2091867
Article

JaPaFi: A Novel Program for the Identification of Highly Conserved DNA Sequences

1 Department of Biochemistry and Microbiology, University of Victoria, Victoria, BC, V8W 3P6, Canada 2 Department of Computer Science, University of Victoria, Victoria, BC, V8W 3P6, Canada
* Author to whom correspondence should be addressed.
Received: 16 June 2010; in revised form: 5 August 2010 / Accepted: 18 August 2010 / Published: 31 August 2010
(This article belongs to the Special Issue Viral Genomics and Bioinformatics)
PDF Full-text Download PDF Full-Text [1064 KB, uploaded 31 August 2010 11:11 CEST]
Abstract: We describe the use of Java Pattern Finder (JaPaFi) to identify short (
Keywords: Poxvirus; bioinformatics; highly conserved sequences; approximate match; conserved function; JaPaFi

Article Statistics

Load and display the download statistics.

Citations to this Article

Cite This Article

MDPI and ACS Style

Sadeque, A.; Barsky, M.; Marass, F.; Kruczkiewicz, P.; Upton, C. JaPaFi: A Novel Program for the Identification of Highly Conserved DNA Sequences. Viruses 2010, 2, 1867-1885.

AMA Style

Sadeque A, Barsky M, Marass F, Kruczkiewicz P, Upton C. JaPaFi: A Novel Program for the Identification of Highly Conserved DNA Sequences. Viruses. 2010; 2(9):1867-1885.

Chicago/Turabian Style

Sadeque, Aliya; Barsky, Marina; Marass, Francesco; Kruczkiewicz, Peter; Upton, Chris. 2010. "JaPaFi: A Novel Program for the Identification of Highly Conserved DNA Sequences." Viruses 2, no. 9: 1867-1885.

Viruses EISSN 1999-4915 Published by MDPI AG, Basel, Switzerland RSS E-Mail Table of Contents Alert