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<front>
<journal-meta>
<journal-id journal-id-type="nlm-ta">Sensors</journal-id>
<journal-title>Sensors</journal-title>
<issn pub-type="epub">1424-8220</issn>
<publisher>
<publisher-name>Molecular Diversity Preservation International (MDPI)</publisher-name></publisher></journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3390/s91108382</article-id>
<article-id pub-id-type="publisher-id">sensors-09-08382</article-id>
<article-categories>
<subj-group>
<subject>Article</subject></subj-group></article-categories>
<title-group>
<article-title>Material Limitations on the Detection Limit in Refractometry</article-title></title-group>
<contrib-group>
<contrib contrib-type="author">
<name><surname>Skafte-Pedersen</surname><given-names>Peder</given-names></name><xref ref-type="aff" rid="af1-sensors-09-08382"><sup>1</sup></xref></contrib>
<contrib contrib-type="author">
<name><surname>Nunes</surname><given-names>Pedro S.</given-names></name><xref ref-type="aff" rid="af1-sensors-09-08382"><sup>1</sup></xref></contrib>
<contrib contrib-type="author">
<name><surname>Xiao</surname><given-names>Sanshui</given-names></name><xref ref-type="aff" rid="af2-sensors-09-08382"><sup>2</sup></xref></contrib>
<contrib contrib-type="author">
<name><surname>Mortensen</surname><given-names>Niels Asger</given-names></name><xref ref-type="aff" rid="af2-sensors-09-08382"><sup>2</sup></xref><xref ref-type="corresp" rid="c1-sensors-09-08382"><sup>*</sup></xref></contrib></contrib-group>
<aff id="af1-sensors-09-08382">
<label>1</label> Department of Micro and Nanotechnology, Technical University of Denmark, DTU Nanotech, Building 345 East, DK-2800 Kongens Lyngby, Denmark; E-Mails: <email>peder.skafte-pedersen@nanotech.dtu.dk</email> (P.S.P.); <email>pedro.nunes@nanotech.dtu.dk</email> (P.S.N.)</aff>
<aff id="af2-sensors-09-08382">
<label>2</label> Department of Photonics Engineering, Technical University of Denmark, DTU Fotonik, Building 345 West, DK-2800 Kongens Lyngby, Denmark; E-Mail: <email>sanshui.xiao@fotonik.dtu.dk</email> (S.X.)</aff>
<author-notes>
<corresp id="c1-sensors-09-08382">
<label>*</label>Author to whom correspondence should be addressed; E-Mail: <email>asger@mailaps.org</email>; Tel.: +45-45-25-66-22.</corresp></author-notes>
<pub-date pub-type="collection">
<year>2009</year></pub-date>
<pub-date pub-type="epub">
<day>26</day>
<month>10</month>
<year>2009</year></pub-date>
<volume>9</volume>
<issue>11</issue>
<fpage>8382</fpage>
<lpage>8390</lpage>
<history>
<date date-type="received">
<day>3</day>
<month>7</month>
<year>2009</year></date>
<date date-type="rev-recd">
<day>22</day>
<month>9</month>
<year>2009</year></date>
<date date-type="accepted">
<day>29</day>
<month>9</month>
<year>2009</year></date></history>
<permissions>
<copyright-statement>© 2009 by the authors; licensee Molecular Diversity Preservation International, Basel, Switzerland.</copyright-statement>
<copyright-year>2009</copyright-year>
<license>
<p>This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/).</p></license></permissions>
<abstract>
<p>We discuss the detection limit for refractometric sensors relying on high-<italic>Q</italic> optical cavities and show that the ultimate classical detection limit is given by min {Δ<italic>n</italic>} ≳ <italic>η</italic>, with <italic>n</italic> + <italic>iη</italic> being the complex refractive index of the material under refractometric investigation. Taking finite <italic>Q</italic> factors and filling fractions into account, the detection limit declines. As an example we discuss the fundamental limits of silicon-based high-<italic>Q</italic> resonators, such as photonic crystal resonators, for sensing in a bio-liquid environment, such as a water buffer. In the transparency window (<italic>λ</italic> ≳ 1100 nm) of silicon the detection limit becomes almost independent on the filling fraction, while in the visible, the detection limit depends strongly on the filling fraction because the silicon absorbs strongly.</p></abstract>
<kwd-group>
<kwd>refractometry</kwd>
<kwd>resonators</kwd>
<kwd>optofluidics</kwd>
<kwd>photonic crystals</kwd></kwd-group></article-meta></front>
<body>
<sec sec-type="intro">
<label>1.</label>
<title>Introduction</title>
<p>Refractometry is one of the classical workhorses among a variety of optical techniques in analytical chemistry. In its basic principle, it allows the quantification of concentration changes by means of an associated refractive-index change leading to frequency shifts of optical resonances. Optofluidics integration [<xref ref-type="bibr" rid="b1-sensors-09-08382">1</xref>–<xref ref-type="bibr" rid="b3-sensors-09-08382">3</xref>] holds promises for refractometric analysis of minute sample volumes by the aid of optical resonators integrated in microfluidic architectures. Integrated nanophotonic resonators are beginning to show promising potential for high sensitivity and detection of minute concentrations [<xref ref-type="bibr" rid="b4-sensors-09-08382">4</xref>–<xref ref-type="bibr" rid="b8-sensors-09-08382">8</xref>] and the sensing performance is under active consideration in the research community [<xref ref-type="bibr" rid="b9-sensors-09-08382">9</xref>–<xref ref-type="bibr" rid="b11-sensors-09-08382">11</xref>]. More recent photonic crystal resonator designs emphasize the optimization of the light-matter overlap [<xref ref-type="bibr" rid="b12-sensors-09-08382">12</xref>], which serves to increase the sensitivity [<xref ref-type="bibr" rid="b11-sensors-09-08382">11</xref>]. However, the detection limit is of equal importance in many applications [<xref ref-type="bibr" rid="b9-sensors-09-08382">9</xref>]. <italic>How small a refractive-index change can a resonator-based sensor setup quantify reliably</italic>? In this paper we explore the material absorption limitations. This allows us to estimate the ultimate detection limit, provided that resonators with sufficiently high intrinsic <italic>Q</italic><sub>0</sub> value are available. For silicon based sensors operating in an aqueous environment, we find that for <italic>λ</italic> ≳ 1100 nm, the ultimate detection limit is given by min {Δ<italic>n</italic>} ∼ <italic>η</italic> with <italic>η</italic> being the strongly wavelength-dependent imaginary index of water, i.e., the extinction coefficient. As a consequence, it should in principle be possible to detect refractive-index changes down to 10<sup>−5</sup> at <italic>λ</italic> ∼ 1200 nm, while at wavelength of <italic>λ</italic> ∼ 1500 nm the ultimate detection limit is increased by an order of magnitude to 10<sup>−4</sup>. On the other hand, in the visible it is difficult to go below 10<sup>−2</sup>. According to our knowledge, the limitation of material absorption is a central, but overlooked issue that was only pointed out very recently in independent work (on photonic crystal resonators) by Tomljenovic-Hanic <italic>et al.</italic> [<xref ref-type="bibr" rid="b13-sensors-09-08382">13</xref>].</p>
<p>The remaining part of the manuscript is organized as follows. In Section 2. we use electromagnetic perturbation theory to calculate the sensitivity and the associated detection limit. In Section 3. we discuss our results in the context of various resonator examples and as a particular example we consider the ultimate detection limit for silicon-based sensors in an aqueous environment. Finally, in Section 4. discussions and conclusions are given.</p></sec>
<sec>
<label>2.</label>
<title>Theory</title>
<p>Consider an electromagnetic resonance with a density of states (or power spectrum) which for simplicity could be given by a Lorentzian line shape:
<disp-formula id="FD1">
<label>(1)</label>
<mml:math id="mm1" display="block">
<mml:semantics id="sm1">
<mml:mrow>
<mml:mi>ρ</mml:mi>
<mml:mo stretchy="false">(</mml:mo>
<mml:mi>ω</mml:mi>
<mml:mo stretchy="false">)</mml:mo>
<mml:mo>=</mml:mo>
<mml:mfrac>
<mml:mn>1</mml:mn>
<mml:mi>π</mml:mi></mml:mfrac>
<mml:mfrac>
<mml:mrow>
<mml:mi>δ</mml:mi>
<mml:mi>ω</mml:mi>
<mml:mo>/</mml:mo>
<mml:mn>2</mml:mn></mml:mrow>
<mml:mrow>
<mml:msup>
<mml:mrow>
<mml:mo stretchy="false">(</mml:mo>
<mml:mi>ω</mml:mi>
<mml:mo>−</mml:mo>
<mml:mi mathvariant="normal">Ω</mml:mi>
<mml:mo stretchy="false">)</mml:mo></mml:mrow>
<mml:mn>2</mml:mn></mml:msup>
<mml:mo>+</mml:mo>
<mml:msup>
<mml:mrow>
<mml:mo stretchy="false">(</mml:mo>
<mml:mi>δ</mml:mi>
<mml:mi>ω</mml:mi>
<mml:mo>/</mml:mo>
<mml:mn>2</mml:mn>
<mml:mo stretchy="false">)</mml:mo></mml:mrow>
<mml:mn>2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mrow></mml:semantics></mml:math></disp-formula>where Ω is the resonance frequency and <italic>δω</italic> is the line width corresponding to a quality factor <italic>Q</italic> = Ω/<italic>δω</italic>. The sensitivity of a resonator is a measure of the resonance wavelength shift as function of the refractive-index change. For applications in refractometry, first order perturbation theory is adequate and gives (e.g., see [<xref ref-type="bibr" rid="b11-sensors-09-08382">11</xref>]):
<disp-formula id="FD2">
<label>(2)</label>
<mml:math id="mm2" display="block">
<mml:semantics id="sm2">
<mml:mrow>
<mml:mi mathvariant="normal">Δ</mml:mi>
<mml:mi mathvariant="normal">Ω</mml:mi>
<mml:mo>=</mml:mo>
<mml:mo>−</mml:mo>
<mml:mfrac>
<mml:mi mathvariant="normal">Ω</mml:mi>
<mml:mn>2</mml:mn></mml:mfrac>
<mml:mfrac>
<mml:mrow>
<mml:mrow>
<mml:mo>〈</mml:mo>
<mml:mrow>
<mml:mi>E</mml:mi>
<mml:mrow>
<mml:mo stretchy="false">|</mml:mo>
<mml:mrow>
<mml:mi mathvariant="normal">Δ</mml:mi>
<mml:mi>ε</mml:mi></mml:mrow>
<mml:mo stretchy="false">|</mml:mo></mml:mrow>
<mml:mi>E</mml:mi></mml:mrow>
<mml:mo>〉</mml:mo></mml:mrow></mml:mrow>
<mml:mrow>
<mml:mn>2</mml:mn>
<mml:mrow>
<mml:mo>〈</mml:mo>
<mml:mrow>
<mml:mi>E</mml:mi>
<mml:mrow>
<mml:mo stretchy="false">|</mml:mo>
<mml:mi>ε</mml:mi>
<mml:mo stretchy="false">|</mml:mo></mml:mrow>
<mml:mi>E</mml:mi></mml:mrow>
<mml:mo>〉</mml:mo></mml:mrow></mml:mrow></mml:mfrac></mml:mrow></mml:semantics></mml:math></disp-formula></p>
<p>This expression can be used to calculate the resonance frequency shift caused by a small change in the real part of the complex refractive index for materials in proximity with the cavity mode. We label the different material constituents by the index <italic>j</italic> so that [<xref ref-type="bibr" rid="b11-sensors-09-08382">11</xref>]
<disp-formula id="FD3">
<label>(3)</label>
<mml:math id="mm3" display="block">
<mml:semantics id="sm3">
<mml:mrow>
<mml:mi mathvariant="normal">Δ</mml:mi>
<mml:mi mathvariant="normal">Ω</mml:mi>
<mml:mo>=</mml:mo>
<mml:mo>−</mml:mo>
<mml:mi mathvariant="normal">Ω</mml:mi>
<mml:munder>
<mml:mo>∑</mml:mo>
<mml:mi>j</mml:mi></mml:munder>
<mml:mrow>
<mml:msub>
<mml:mi>f</mml:mi>
<mml:mi>j</mml:mi></mml:msub>
<mml:mfrac>
<mml:mrow>
<mml:mi mathvariant="normal">Δ</mml:mi>
<mml:msub>
<mml:mi>n</mml:mi>
<mml:mi>j</mml:mi></mml:msub></mml:mrow>
<mml:mrow>
<mml:msub>
<mml:mi>n</mml:mi>
<mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mrow></mml:mrow></mml:semantics></mml:math></disp-formula>where <italic>n<sub>j</sub></italic> is the real part of the complex refractive index <italic>n<sub>j</sub></italic> + <italic>iη<sub>j</sub></italic> and the filling fraction is given by
<disp-formula id="FD4">
<label>(4)</label>
<mml:math id="mm4" display="block">
<mml:semantics id="sm4">
<mml:mrow>
<mml:msub>
<mml:mi>f</mml:mi>
<mml:mi>j</mml:mi></mml:msub>
<mml:mo>=</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mrow>
<mml:mo>〈</mml:mo>
<mml:mrow>
<mml:mi>E</mml:mi>
<mml:mrow>
<mml:mo stretchy="false">|</mml:mo>
<mml:mi>ε</mml:mi>
<mml:mo stretchy="false">|</mml:mo></mml:mrow>
<mml:mi>E</mml:mi></mml:mrow>
<mml:mo>〉</mml:mo></mml:mrow></mml:mrow>
<mml:mi>j</mml:mi></mml:msub></mml:mrow>
<mml:mrow>
<mml:mrow>
<mml:mo>〈</mml:mo>
<mml:mrow>
<mml:mi>E</mml:mi>
<mml:mrow>
<mml:mo stretchy="false">|</mml:mo>
<mml:mi>ε</mml:mi>
<mml:mo stretchy="false">|</mml:mo></mml:mrow>
<mml:mi>E</mml:mi></mml:mrow>
<mml:mo>〉</mml:mo></mml:mrow></mml:mrow></mml:mfrac></mml:mrow></mml:semantics></mml:math></disp-formula>with Σ<italic><sub>j</sub> f<sub>j</sub></italic> = 1. The subscript in the numerator indicates that the integral is restricted to the volume fraction where the perturbation is present, while the integral in the denominator is unrestricted.</p>
<p>Next, consider refractometry where a small change in the real part of the refractive index in, say, material <italic>j</italic> = 1 causes a shift in the resonance frequency One first important question is of course what is the sensitivity (or the responsivity) of the system. The answer is given by <xref rid="FD3" ref-type="disp-formula">Equation (3)</xref> and basically the higher is the <italic>f</italic><sub>1</sub> value, the higher is the sensitivity. However, in many applications, the detection limit is of equal concern. <italic>How small changes may one quantify</italic>? As discussed in [<xref ref-type="bibr" rid="b13-sensors-09-08382">13</xref>, <xref ref-type="bibr" rid="b14-sensors-09-08382">14</xref>], the resonance line-width <italic>δω</italic> = Ω/<italic>Q</italic> represents an ultimate measure of the smallest frequency shift that can be quantified accurately. <xref rid="FD3" ref-type="disp-formula">Equation (3)</xref> consequently leads to a bound on the smallest refractive-index change that can be quantified accurately. In this way we arrive at
<disp-formula id="FD5">
<label>(5)</label>
<mml:math id="mm5" display="block">
<mml:semantics id="sm5">
<mml:mrow>
<mml:mo>min</mml:mo>
<mml:mo stretchy="false">{</mml:mo>
<mml:mi mathvariant="normal">Δ</mml:mi>
<mml:msub>
<mml:mi>n</mml:mi>
<mml:mi>j</mml:mi></mml:msub>
<mml:mo stretchy="false">}</mml:mo>
<mml:mo>≳</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:msub>
<mml:mi>n</mml:mi>
<mml:mi>j</mml:mi></mml:msub></mml:mrow>
<mml:mrow>
<mml:mn>2</mml:mn>
<mml:msub>
<mml:mi>f</mml:mi>
<mml:mi>j</mml:mi></mml:msub>
<mml:mi>Q</mml:mi></mml:mrow></mml:mfrac></mml:mrow></mml:semantics></mml:math></disp-formula></p>
<p>Obviously, the higher a quality factor the lower a detection limit. In the following we consider the general situation with
<disp-formula id="FD6">
<label>(6)</label>
<mml:math id="mm6" display="block">
<mml:semantics id="sm6">
<mml:mrow>
<mml:msup>
<mml:mi>Q</mml:mi>
<mml:mrow>
<mml:mo>−</mml:mo>
<mml:mn>1</mml:mn></mml:mrow></mml:msup>
<mml:mo>=</mml:mo>
<mml:msubsup>
<mml:mi>Q</mml:mi>
<mml:mn>0</mml:mn>
<mml:mrow>
<mml:mo>−</mml:mo>
<mml:mn>1</mml:mn></mml:mrow></mml:msubsup>
<mml:mo>+</mml:mo>
<mml:msubsup>
<mml:mi>Q</mml:mi>
<mml:mrow>
<mml:mtext>abs</mml:mtext></mml:mrow>
<mml:mrow>
<mml:mo>−</mml:mo>
<mml:mn>1</mml:mn></mml:mrow></mml:msubsup></mml:mrow></mml:semantics></mml:math></disp-formula>where the first term corresponds to the intrinsic quality factor in the absence of absorption, and the second term accounts for material absorption. For weak absorption (<italic>η</italic> ≪ <italic>n</italic>) we apply <xref rid="FD2" ref-type="disp-formula">Equation (2)</xref>, so that <italic>η</italic> gives a small imaginary frequency shift. In the framework of <xref rid="FD1" ref-type="disp-formula">Equation (1)</xref> this causes an additional broadening corresponding to [<xref ref-type="bibr" rid="b11-sensors-09-08382">11</xref>, <xref ref-type="bibr" rid="b15-sensors-09-08382">15</xref>]
<disp-formula id="FD7">
<label>(7)</label>
<mml:math id="mm7" display="block">
<mml:semantics id="sm7">
<mml:mrow>
<mml:msubsup>
<mml:mi>Q</mml:mi>
<mml:mrow>
<mml:mtext>abs</mml:mtext></mml:mrow>
<mml:mrow>
<mml:mo>−</mml:mo>
<mml:mn>1</mml:mn></mml:mrow></mml:msubsup>
<mml:mo>=</mml:mo>
<mml:munder>
<mml:mo>∑</mml:mo>
<mml:mi>j</mml:mi></mml:munder>
<mml:mrow>
<mml:mn>2</mml:mn>
<mml:msub>
<mml:mi>f</mml:mi>
<mml:mi>j</mml:mi></mml:msub>
<mml:mfrac>
<mml:mrow>
<mml:msub>
<mml:mi>η</mml:mi>
<mml:mi>j</mml:mi></mml:msub></mml:mrow>
<mml:mrow>
<mml:msub>
<mml:mi>n</mml:mi>
<mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mrow></mml:mrow></mml:semantics></mml:math></disp-formula></p>
<p>The detection limit, <xref rid="FD5" ref-type="disp-formula">Equation (5)</xref>, now becomes
<disp-formula id="FD8">
<label>(8)</label>
<mml:math id="mm8" display="block">
<mml:semantics id="sm8">
<mml:mrow>
<mml:mo>min</mml:mo>
<mml:mo stretchy="false">{</mml:mo>
<mml:mi mathvariant="normal">Δ</mml:mi>
<mml:msub>
<mml:mi>n</mml:mi>
<mml:mi>j</mml:mi></mml:msub>
<mml:mo stretchy="false">}</mml:mo>
<mml:mo>≳</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:msub>
<mml:mi>n</mml:mi>
<mml:mi>j</mml:mi></mml:msub></mml:mrow>
<mml:mrow>
<mml:mn>2</mml:mn>
<mml:msub>
<mml:mi>f</mml:mi>
<mml:mi>j</mml:mi></mml:msub>
<mml:msub>
<mml:mi>Q</mml:mi>
<mml:mn>0</mml:mn></mml:msub></mml:mrow></mml:mfrac>
<mml:mo>+</mml:mo>
<mml:munder>
<mml:mo>∑</mml:mo>
<mml:mi>i</mml:mi></mml:munder>
<mml:mrow>
<mml:mfrac>
<mml:mrow>
<mml:msub>
<mml:mi>f</mml:mi>
<mml:mi>i</mml:mi></mml:msub></mml:mrow>
<mml:mrow>
<mml:msub>
<mml:mi>f</mml:mi>
<mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfrac>
<mml:mfrac>
<mml:mrow>
<mml:msub>
<mml:mi>n</mml:mi>
<mml:mi>j</mml:mi></mml:msub></mml:mrow>
<mml:mrow>
<mml:msub>
<mml:mi>n</mml:mi>
<mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:mfrac>
<mml:msub>
<mml:mi>η</mml:mi>
<mml:mi>i</mml:mi></mml:msub>
<mml:mo>.</mml:mo></mml:mrow></mml:mrow></mml:semantics></mml:math></disp-formula></p>
<p>This is the main result of this section. For a two-component structure with <italic>f</italic><sub>1</sub> + <italic>f</italic><sub>2</sub> = 1, the result further simplifies to
<disp-formula id="FD9">
<label>(9)</label>
<mml:math id="mm9" display="block">
<mml:semantics id="sm9">
<mml:mrow>
<mml:mo>min</mml:mo>
<mml:mo stretchy="false">{</mml:mo>
<mml:mi mathvariant="normal">Δ</mml:mi>
<mml:msub>
<mml:mi>n</mml:mi>
<mml:mn>1</mml:mn></mml:msub>
<mml:mo stretchy="false">}</mml:mo>
<mml:mo>≳</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:msub>
<mml:mi>n</mml:mi>
<mml:mn>1</mml:mn></mml:msub></mml:mrow>
<mml:mrow>
<mml:mn>2</mml:mn>
<mml:mi>f</mml:mi>
<mml:msub>
<mml:mi>Q</mml:mi>
<mml:mn>0</mml:mn></mml:msub></mml:mrow></mml:mfrac>
<mml:mo>+</mml:mo>
<mml:msub>
<mml:mi>η</mml:mi>
<mml:mn>1</mml:mn></mml:msub>
<mml:mo>+</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:mn>1</mml:mn>
<mml:mo>−</mml:mo>
<mml:mi>f</mml:mi></mml:mrow>
<mml:mi>f</mml:mi></mml:mfrac>
<mml:mfrac>
<mml:mrow>
<mml:msub>
<mml:mi>n</mml:mi>
<mml:mn>2</mml:mn></mml:msub></mml:mrow>
<mml:mrow>
<mml:msub>
<mml:mi>n</mml:mi>
<mml:mn>1</mml:mn></mml:msub></mml:mrow></mml:mfrac>
<mml:msub>
<mml:mi>η</mml:mi>
<mml:mn>2</mml:mn></mml:msub></mml:mrow></mml:semantics></mml:math></disp-formula>where we have introduced <italic>f</italic> ≡ <italic>f</italic><sub>1</sub> and where the perturbation is assumed to be applied to medium <italic>j</italic> = 1. We emphasize that a much similar result was reported recently by Tomljenovic-Hanic <italic>et al.</italic> [<xref ref-type="bibr" rid="b13-sensors-09-08382">13</xref>] in a study of silicon photonic crystal resonators, though min {Δ<italic>n<sub>j</sub></italic>} was emphasized less explicitly. In this work we arrive at the simple result for min {Δ<italic>n<sub>j</sub></italic>} by using the conventional limit, that the smallest detectable frequency shift is limited by the resonance linewidth, as also discussed in [<xref ref-type="bibr" rid="b13-sensors-09-08382">13</xref>]. If the signal-to-noise ratio is adequate, detection of sub-linewidth shifts is in principle possible, but this would call for more advanced data analysis, e.g., locking onto the resonant frequency in order to compensate for noise and fluctuations in the spectrum. As pointed out in [<xref ref-type="bibr" rid="b14-sensors-09-08382">14</xref>], the above classical limit is the most desirable one to consider when balancing detection limits and experimental complexity. We note that our assumption of a homogeneous sample greatly simplifies the calculation while a general expression can not be derived for a heterogeneous sample. In that case, one would need detailed information on the spatial variations of both the sample concentration as well as the field profiles. In the following we analyze the consequences of <xref rid="FD9" ref-type="disp-formula">Equation (9)</xref> for a number of optical sensing architectures as well as in the context of material parameters.</p></sec>
<sec>
<label>3.</label>
<title>Examples</title>
<sec>
<label>3.1.</label>
<title>Gas Sensing</title>
<p>Gas sensing and detection is an important application, which is nevertheless difficult due to various reasons including the fact that a dilute gas only perturbs the resonator modestly compared with vacuum conditions. This is very pronounced in the case where the resonator is detuned from strong gas-absorption lines so that <italic>n</italic> ≃ 1 and <italic>η</italic> ≃ 0. Glass-sphere resonators are in this context particularly interesting. They support high-<italic>Q</italic> whispering-gallery modes which may be used for sensing [<xref ref-type="bibr" rid="b14-sensors-09-08382">14</xref>] and in particular, such resonators may be employed for refractometric measurements in a gaseous environment without strongly degrading the quality factor. The cavity field is mainly confined to the interior of the sphere while the refractive-index perturbation occurs in the exterior, where the field is evanescent. This means that <italic>f</italic> is vanishing and therefore the sensitivity is not particularly high, see <xref rid="FD3" ref-type="disp-formula">Equation (3)</xref>. However, in applications involving the detection of minute concentration changes this may be compensated by the possibilities for extremely low detection limits. In the limit with strong light confinement, <xref rid="FD9" ref-type="disp-formula">Equation (9)</xref> simplifies to
<disp-formula id="FD10">
<label>(10)</label>
<mml:math id="mm10" display="block">
<mml:semantics id="sm10">
<mml:mrow>
<mml:mo>min</mml:mo>
<mml:mo stretchy="false">{</mml:mo>
<mml:mi mathvariant="normal">Δ</mml:mi>
<mml:mi>n</mml:mi>
<mml:mo stretchy="false">}</mml:mo>
<mml:mo>≳</mml:mo>
<mml:mfrac>
<mml:mi>n</mml:mi>
<mml:mrow>
<mml:mi>f</mml:mi>
<mml:msub>
<mml:mi>Q</mml:mi>
<mml:mn>0</mml:mn></mml:msub></mml:mrow></mml:mfrac>
<mml:mo>+</mml:mo>
<mml:mi>η</mml:mi>
<mml:mo>,</mml:mo>
<mml:mspace width="1em"/>
<mml:mo stretchy="false">(</mml:mo>
<mml:mi>f</mml:mi>
<mml:mo>≪</mml:mo>
<mml:mn>1</mml:mn>
<mml:mo stretchy="false">)</mml:mo></mml:mrow></mml:semantics></mml:math></disp-formula></p>
<p>If measurements are performed away from a strong gas-absorption line, then <italic>n</italic> ≃ 1 and <italic>η</italic> ≃ 0 and the detection limit is basically limited by 1/<italic>fQ</italic><sub>0</sub> of the spherical resonator. On the other hand, if <italic>η</italic> ≫ 1/<italic>fQ</italic><sub>0</sub> then the detection limit is governed by the absorption being intrinsic to the gas. Photonic crystal structures may support resonances with values of <italic>fQ</italic><sub>0</sub> in excess of 10<sup>5</sup> [<xref ref-type="bibr" rid="b13-sensors-09-08382">13</xref>] and spherical resonators may potentially support even higher values [<xref ref-type="bibr" rid="b14-sensors-09-08382">14</xref>, <xref ref-type="bibr" rid="b16-sensors-09-08382">16</xref>–<xref ref-type="bibr" rid="b18-sensors-09-08382">18</xref>]. This makes refractometric measurements an important alternative to Beer–Lambert gas absorption measurements (e.g., see [<xref ref-type="bibr" rid="b19-sensors-09-08382">19</xref>] and references therein).</p></sec>
<sec>
<label>3.2.</label>
<title>Liquid-phase Sensing—General Considerations</title>
<p>Imagine that sensing occurs in the liquid phase, so that the damping of the liquid cannot be ignored. In the following we consider water which is the natural environment and buffer for a range of bio-chemical applications. From our general analysis it follows that one can never achieve a detection limit that overcomes the damping in the liquid. In the limit of perfect light-liquid overlap (<italic>f</italic> → 1) and a high intrinsic quality factor (<italic>Q</italic><sub>0</sub> ≫ 1/<italic>η</italic><sub>water</sub>), <xref rid="FD3" ref-type="disp-formula">Equation (3)</xref> gives
<disp-formula id="FD11">
<label>(11)</label>
<mml:math id="mm11" display="block">
<mml:semantics id="sm11">
<mml:mrow>
<mml:mo>min</mml:mo>
<mml:mo stretchy="false">{</mml:mo>
<mml:mi mathvariant="normal">Δ</mml:mi>
<mml:mi>n</mml:mi>
<mml:mo stretchy="false">}</mml:mo>
<mml:mo>&gt;</mml:mo>
<mml:msub>
<mml:mi>η</mml:mi>
<mml:mrow>
<mml:mtext>water</mml:mtext></mml:mrow></mml:msub></mml:mrow></mml:semantics></mml:math></disp-formula></p>
<p>In <xref ref-type="fig" rid="f1-sensors-09-08382">Figure 1</xref> we illustrate the implications of this result by showing experimental data for water [<xref ref-type="bibr" rid="b20-sensors-09-08382">20</xref>]. Experimentally, <italic>η</italic> may be obtained from the exponential damping in a transmission measurement where the absorption coefficient is given by <italic>α</italic><sub>abs</sub> = <italic>η</italic>4<italic>π</italic>/<italic>λ</italic>. We emphasize that for any resonator design, the detection limit will tend to be higher unless the resonance line-width is dominated by liquid absorption. Below we offer a few examples of resonator architectures which have been considered in the literature.</p></sec>
<sec>
<label>3.3.</label>
<title>Liquid-Droplet Resonators</title>
<p>Consider a liquid-droplet resonator where the droplet radius <italic>R</italic> is sufficiently small that gravity can be neglected. Due to surface tension, the droplet now forms a perfectly spherical resonator with the total-internal reflection mechanism supporting whispering gallery modes inside the liquid volume. Because of the total-internal reflection, the cavity field is confined to the same volume as where the refractive-index perturbation occurs and thus the resonances have <italic>f</italic> ≃ 1. The above analysis can now be used to estimate the ultimate detection limit for refractive-index changes in the liquid,
<disp-formula id="FD12">
<label>(12)</label>
<mml:math id="mm12" display="block">
<mml:semantics id="sm12">
<mml:mrow>
<mml:mo>min</mml:mo>
<mml:mo stretchy="false">{</mml:mo>
<mml:mi mathvariant="normal">Δ</mml:mi>
<mml:mi>n</mml:mi>
<mml:mo stretchy="false">}</mml:mo>
<mml:mo>≳</mml:mo>
<mml:msup>
<mml:mi>Q</mml:mi>
<mml:mrow>
<mml:mo>−</mml:mo>
<mml:mn>1</mml:mn></mml:mrow></mml:msup>
<mml:mo>≃</mml:mo>
<mml:msub>
<mml:mi>η</mml:mi>
<mml:mrow>
<mml:mtext>water</mml:mtext></mml:mrow></mml:msub>
<mml:mspace width="1em"/>
<mml:mo stretchy="false">(</mml:mo>
<mml:msub>
<mml:mi>Q</mml:mi>
<mml:mn>0</mml:mn></mml:msub>
<mml:mo>≫</mml:mo>
<mml:msub>
<mml:mi>Q</mml:mi>
<mml:mrow>
<mml:mtext>abs</mml:mtext></mml:mrow></mml:msub>
<mml:mo stretchy="false">)</mml:mo></mml:mrow></mml:semantics></mml:math></disp-formula>the data in <xref ref-type="fig" rid="f1-sensors-09-08382">Figure 1</xref> for water makes such liquid-droplet particularly interesting for sensing applications in the visible part of the spectrum. Liquid droplets are considered interesting candidates for high-Q cavities, because the whispering-gallery modes do not suffer from surface roughness, as surface-tension makes the surface shape spherical and smooth on the molecular length scale. The present analysis suggests that these systems my potentially provide the ultimate detection limit for liquid-phase refractometry. Liquid-droplet resonators have recently been the subject of a number of studies [<xref ref-type="bibr" rid="b21-sensors-09-08382">21</xref>–<xref ref-type="bibr" rid="b24-sensors-09-08382">24</xref>] and for a recent review of droplet-based cavities and resonators, we refer to [<xref ref-type="bibr" rid="b25-sensors-09-08382">25</xref>].</p></sec>
<sec>
<label>3.4.</label>
<title>Liquid-infiltrated Silicon Photonic Crystals</title>
<p>As an example we consider silicon photonic crystals (Si) infiltrated by liquid with a complex refractive index. Assuming that the intrinsic line width can be neglected we get
<disp-formula id="FD13">
<label>(13)</label>
<mml:math id="mm13" display="block">
<mml:semantics id="sm13">
<mml:mrow>
<mml:mo>min</mml:mo>
<mml:mo stretchy="false">{</mml:mo>
<mml:mi mathvariant="normal">Δ</mml:mi>
<mml:mi>n</mml:mi>
<mml:mo stretchy="false">}</mml:mo>
<mml:mo>≳</mml:mo>
<mml:msub>
<mml:mi>η</mml:mi>
<mml:mrow>
<mml:mtext>water</mml:mtext></mml:mrow></mml:msub>
<mml:mo>+</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:mn>1</mml:mn>
<mml:mo>−</mml:mo>
<mml:mi>f</mml:mi></mml:mrow>
<mml:mi>f</mml:mi></mml:mfrac>
<mml:mfrac>
<mml:mi>n</mml:mi>
<mml:mrow>
<mml:msub>
<mml:mi>n</mml:mi>
<mml:mrow>
<mml:mtext>Si</mml:mtext></mml:mrow></mml:msub></mml:mrow></mml:mfrac>
<mml:msub>
<mml:mi>η</mml:mi>
<mml:mrow>
<mml:mtext>Si</mml:mtext></mml:mrow></mml:msub>
<mml:mspace width="1em"/>
<mml:mo stretchy="false">(</mml:mo>
<mml:msub>
<mml:mi>Q</mml:mi>
<mml:mn>0</mml:mn></mml:msub>
<mml:mo>≫</mml:mo>
<mml:msub>
<mml:mi>Q</mml:mi>
<mml:mrow>
<mml:mtext>abs</mml:mtext></mml:mrow></mml:msub>
<mml:mo stretchy="false">)</mml:mo></mml:mrow></mml:semantics></mml:math></disp-formula></p>
<p>Since the imaginary part of the refractive index is strongly dispersive for both water and silicon, the ultimate detection limit clearly depends on the operational wavelength. Furthermore, the fact that water is most transparent in the visible, while silicon transmits best in the near-infrared, suggests that there exists an optimal wavelength for the detection limit in terms of the refractive-index change. <xref ref-type="fig" rid="f2-sensors-09-08382">Figure 2</xref> illustrates the ultimate detection limit for silicon-based resonator structures infiltrated by liquid for varying values of the light-liquid overlap <italic>f</italic>. Calculations are based on data for water and silicon tabulated in the handbooks by Palik [<xref ref-type="bibr" rid="b20-sensors-09-08382">20</xref>, <xref ref-type="bibr" rid="b26-sensors-09-08382">26</xref>]. Quite interestingly, the plot reveals that an optimal detection limit of the order 10<sup>−5</sup> occurring around the onset of transparency in silicon at <italic>λ</italic> ∼ 1.1 <italic>μ</italic>m. We emphasize that this ultimate detection limit of course implicitly assumes that the resonance has <italic>Q</italic><sub>0</sub> &gt; 10<sup>5</sup>. So far, quality factors of the order <italic>Q</italic> ∼ 5 × 10<sup>4</sup> have been reported in microfluidic silicon-based photonic crystal resonators [<xref ref-type="bibr" rid="b27-sensors-09-08382">27</xref>], though the liquid was not water. It is also interesting to note that despite the transparency of water in the visible, the damping in silicon jeopardizes any realistic application with <italic>f</italic> ≲ 0.9.</p>
<p>Of course, if the detection limit is associated with the concentration <italic>C</italic> of molecules instead, one should also take the wavelength dependence of the so-called molar extinction coefficient [∝ <italic>λ</italic><sup>−1</sup><italic>∂</italic>(Δ<italic>n</italic>)/<italic>∂C</italic>] into account, i.e., at which wavelength does a concentration change lead to the largest possible refractive-index change. Clearly, the extinction coefficient is specific to the molecule in question.</p></sec></sec>
<sec sec-type="conclusions">
<label>4.</label>
<title>Conclusions</title>
<p>In conclusion, with the aid of perturbation theory, we have explored the fundamental limitations on the detection limit due to material absorption. As a general result, it is difficult to detect refractive-index changes smaller than the associated imaginary part of the refractive index. The main assumption behind this quite intuitive result is that the smallest detectable frequency shift is limited by the resonance linewidth. For liquid-infiltrated silicon-based optical resonators in photonic crystal architectures, we find an optimal wavelength range resulting from the strong wavelength dependence of <italic>η</italic> for both water and silicon. Our results may be extended to also other material platforms. As an example, for visible applications one may take advantage of transparent glasses, such as SiON or SiO<sub>2</sub> where <italic>η</italic> can be of the order of 10<sup>−4</sup>, though with a real part of the refractive index much reduced compared with semiconductor materials like silicon. In the quest for refractometric sensors with yet better detection limits, our results are central to the general design of liquid-infiltrated dielectric resonators. In addition to the efforts put into the cavity structural design (e.g., the optimization of <italic>Q</italic><sub>0</sub>), the present analysis illustrates the importance of choosing the appropriate combination of light-sources (<italic>λ</italic>), resonator designs (<italic>f</italic>), materials (<italic>η</italic><sub>2</sub>), and bio-chemical buffer media (<italic>η</italic><sub>1</sub>).</p></sec></body>
<back>
<ack>
<p>This work is supported by the Danish Council for Strategic Research (DSF Grant No. 2117-05-0037) and the Danish Council for Technology and Production Sciences (FTP Grants No. 274-07-0379 and No. 274-06-0193).</p></ack>
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<sec sec-type="display-objects">
<title>Figures</title>
<fig id="f1-sensors-09-08382" position="float">
<label>Figure 1.</label>
<caption>
<p>Imaginary part of the refractive index for water. According to <xref rid="FD11" ref-type="disp-formula">Equation (11)</xref>, the curve also represents the ultimate detection limit for refractometry in an aqueous environment. Data is reproduced from [<xref ref-type="bibr" rid="b20-sensors-09-08382">20</xref>].</p></caption>
<graphic xlink:href="sensors-09-08382f1.gif"/></fig>
<fig id="f2-sensors-09-08382" position="float">
<label>Figure 2.</label>
<caption>
<p>Ultimate detection limit for a resonance in a silicon structure infiltrated by water. The different traces show results for varying values of the light-liquid overlap <italic>f</italic>. The dashes lines show the imaginary part of the refractive index for water and silicon, respectively. Based on data for water and silicon from [<xref ref-type="bibr" rid="b20-sensors-09-08382">20</xref>, <xref ref-type="bibr" rid="b26-sensors-09-08382">26</xref>].</p></caption>
<graphic xlink:href="sensors-09-08382f2.gif"/></fig></sec></back></article>
