Alignment for online common carp ESTs and the location of putative SNPs 1. 100 200 300 400 500 600 700 800 900 1000 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.... Cyprinus_Cluster7873.seq.Contig1 AAAATACCCTAATAACATATCTTTAAAATAAAGACAAATATATATCTATCCCCCCCTAGTAAAAAACCCCAGTCCATAACAACCCCCCCCCTATGCATTAAAAACATGCCCAATTTCCCATCAAAGCTTCTGCCCCCCTATTAATGGATTTCACTCCTAACCCCCCAGCTAACATTATCCCCCTCTCTTTTTTGGGAATCCCGCGATAAAATTCCCACGAAAACTCTTTCCCTAATTACCCCTACTCAAATCACTCATATAGGAAATTGGAACCCCCCAGTCCCGCCCGAATCCCCGGTCCCCCCCCCTCCCCCATTTTTCTTCTGTTCCTTCTTTTCACTGCAGGACACTCTCTCAGCTGTTATGAGTGTATGGGTCTGACGGGTTCTTGCTCAGATCAAAGGGTAAAAACATGTCCCAGTGGATTTTCAAAGTGCATGAGTTCAACAACTGTAGCACAAGCTGGTGGCAACAGTGCTAAA*GTGATGCTTAAAGACTGTATTGCTGACTGTCCAAGTGGATCCATGAACCTCGGCATTGCAAAAACATCTTTTGCGTGCTGTAACACAGACCAGTGTAACGTCCAAGACGCTCCAGATCCTTCTAATGTCCCCAACGGGAAAGACGTGTTACTCTTGT*GATGGACAGAGCTGCTCAAACATATTGAGCTGTACAGGGAATGAAGACCGCTGCTTGAAAGCAACAGGGCGTTTCGGTGGCCAGTCAATGGTTATAAAAGGCTGTATCTCTAAATCTTTCTGTGATGCTGGATCATCGGTTCAGGATGTTCAGGGTGTCTCATGTTGTGAGGGGAACCTGTGTAACGGTGCTCAGAGCGTCACTCAGAGCTTCCTGTTCCTCTGCTGTTCTCTGCTCTCCTTCATCCTGCTGCACTGAATCCAGCAGCTCTTCACATTCACATCTACAATCAGACACACTGCACTGAATATAGAGCTTGTATATTCTCTGTACTGTGCATCTTTTGTGTCCTGGTATGTTTTTTTGGCTGTGACATTCTTCTGTAACATTTTTTTAAATAAAATACTACATTACCTTTAAAAA -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|28465229|gb|AU300950.1|AU300950 AAAATACCCTAATAACATATCTTTAAAATAAAGACAAATATATATCTATCCCCCCCTAGTAAAAAACCCCAGTCCATAACAACCCCCCCCCTATGCATTAAAAACATGCCCAATTTCCCATCAAAGCTTCTGCCCCCCTATTAATGGATTTCACTCCTAACCCCCCAGCTAACATTATCCCCCTCTCTTTTTTGGGAATCCCGCGATAAAATTCCCACGAAAACTCTTTCCCTAATTACCCCTACTCAAATCACTCATATAGGAAATTGGAACCCCCCAGTCCCGCCCGAATCCCCGGTCCCCCCCCCTCCCCCATTTTTCTT*T*TTCCCTCTTTTCCCCGCCGGACACTCCCCCACCT*TTATGGGGGGAGGGGGGGGGCGGTTTCTGGCTCA*ATACAAGGGTAAAAACATTCCCCGGTGTATTTCCCAAGTGCTTGATTTTAACAACTGTACCACAAGCTGGGGCCATCAGT*CTAAAAGGGAAGGTAAAAGACTTTATTGCTGACTTCCCAAGTGCCCCCCCCACCCCCGCCATTGCAAAAAAATCTTTGGCGGGCTGAAACACAGCCCAGTGTACCTCCCAAGCCCCCCCATACCCTTTTAATTCCCCCACCGGGAAAGACGTTTTACTCTGGGAGGAGGA*AGAG*TGCCCAAACATGTGGAGCTTTACGGGGAATAAAGCCCGCTTCTTAAAACCAACGGGGACTTTCGTTGCCCATTCAATGTTTATAAAAGGCTTTTTCTCTAAATCTATCTGGGATGCGGAACCACCGGTCCAGGATGTTCGGGGTTTCTCATGTGGGGGGGGGACCCTGTGTAACGGTGCTCGGAGCGTCACACAGAGCTCCCTGTCCCTCTGCTGTTCTCTGCTCTCCTACATCCTGCTGCACTGAATCCAGCAGCTCTTCACATTCACATCTACAATCAGACACACGCCACGGAATATAGAGCTTGTATATTCTCTGTACTGTGCATCTTTTGTGTCCTGGTATGTTTTTTTTGCTGTGACATTCTTCTGTAACATTTTTTTAAATAAAATACTACATTACCTTTAAAAA gi|50739404|gb|CA965919.2|CA965919 LLLLLLLLLLLLLLLLLLLLLLLLTTTTTCTTCTGTTCCTTCTTTTCACTGCAGGACACTCTCTCAGCTGTTATGAGTGTATGGGTCTGACGGGTTCTTGCTCAGATCAAAGGGTAAAAACGTGTCCCAGTGGATTTTCAAAGTGCATGAGTTCAACAACTGTAGCACAAGCTGGTGGCAACAGTGCTAAA*GTGATGCTTAAAGACTGTATTGCTGACTGTCCAAGTGGATCCATGAACCTCGGCATTGCAAAAACATCTTTTGCGTGCTGTAACACAGACCAGTGTAACGTCCAAGACGCTCCAGATCCTTCTAATGTCCCCAACGG*AAAGACGTGTTACTCTTGT*GATGGACAGAGCTGCTCAAACATATTGAGCTGTACAGGGAATGAAGACCGCTGCTTGAAAGCAACAGGGAGTTTCGGTGGCCAGTCAATGGTTACAAAAGGCTGTATCTCTAAATCTTTCTGTGATGCTGGATCATCGGTTCAGGATGTTCAGGGTGTCTCATGTTGTGAGGGGAACCTGTGTAACGGTGCTCAGAGCGTCACTCAGAGCTTCCTGTTCCTCTGCTGTTCTCTGCTCTCCTTCATCCTGCTGCACTGAATCCAACAGCTCTTCACATTCACATCTACAATCAGACACACTGCACTGAATA gi|109280649|gb|EC392867.1|EC392867 LLLLLLLLLLLLLLLLLLLLTTTTTCTTCTGTTCCTTCTTTTCACTGCAGGACACTCTCTCAGCTGTTATGAGTGTATGGGTCTGACGGGTTCTTGCTCAGATCAAAGGGTAAAAACATGTCCCAGTGGATTTTCAAAGTGCATGAGTTCAACAACTGTAGCACAAGCTGGTGGCAACAGTGCTAAA*GTGATGCTTAAAGACTGTATTGCTGACTGTCCAAGTGGATCCATGAACCTCGGCATTGCAAAAACATCTTTTGCGTGCTGTAACACAGACCAGTGTAACGTCCAAGACGCTCCAGATCCTTCTAATGTCCCCAACGG*AAAGACGTGTTACTCTTGT*GATGGACAGAGCTGCTCAAACATATTGAGCTGTACAGGGAATGAAGACCGCTGCTTGAAAGCAACAGGGCGTTTCGGTGGCCAGTCAATGGTTATAAAAGGCTGTATCTCTAAATCTTTCTGTGATGCTGGATCATCGGTTCAGGATGTTCAGGGTGTCTCATGTTGTGAGGGGAACCTGTGTAGCGGTGCTCAGAGCGTCACTCAGAGCTTCCTGTTCCTCTGCTGTTCTCTGCTCTCCTTCATCCTGCTGCACTGAATCCAGCAGCTCTTCACAT******CTACAATCAGACACACTGCACTGAATATAGAGCTTGTATATTCTCTGTACTGTGCATCTTTTGTGTCC gi|109279584|gb|EC392321.1|EC392321 LLLGGATTTTCAAAGTGCATGAGTTCAACAACTGTAGCACAAGCTGGTGGCAACAGTGCTAAA*GTGATGCTTAAAGACTGTATTGCTGACTGTCCAAGTGGATCCATGAACCTCGGCATTGCAAAAACATCTTTTGCGTGCTGTAACACAGACCAGTGTAACGCCCAAGACGCTCCAGATCCTTCTAATGTCCCCAACGG*AAAGACGTGTTACTCTTGT*GATGGACAGAGCTGCTCAAACATATTGAGCTGTACAGGGAATGAAGACCGCTGCTTGAAAGCAACAGGGCGTTTCGGTGGCCAGTCAATGGTTATAAAAGGCTGTATCTCTAAATCTTTCTGTGATGCTGGATCATCGGTTCAGGATGTTCAGGGTGTCTCATGTTGTGAGGGGAACCTGTGTAACGGTGCTCAGAGCGTCACTCAGAGCTTCCTGTTCCTCTGCTGTTCTCTGCTCTCCTTCATCCTGCTGCACTGAATCCAGCAGCTCTTCACAT******CTACAATCAGACACACTGCACTGAATATAGAGCTTGTATATTCTCTGTACTGTGCATCTTTTGTGTCCTGGTATGTTTTTTTGGCTGTGACATTCTGCTGTGACATTT Putative SNPs: 584T>C, 711A>C 2. 100 200 300 400 500 600 700 800 900 1000 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+..... Cyprinus_Cluster7877.seq.Contig1 TTCGGCCTTACGGCCGGGGGGACTGCTGGCTGCCCTTCGCATTACCAAGAGCAAAATGCACAACCATACCATTGTATTTCAGGGTGCAGGGGAGGCCGCAATGGGCATAGCTGAGCTCATCATTATGGCAATGGAGAAAGAGGGGCTTCCTCGTGAGCAGTGTATAAAGAAAATCTGGATGGTGGACTCTAAAGGTCTTATTGTTAAGGGTAGGGATCACCTCACCCATGAGAAAAAGAGGTTTGCACATGAGCATGCTCAAATGAAAAAGCTTGAGGATGTAGTGAAGGAGCTGAAACCCACTGCTATAATTGGGGTGGCAGCTATCACTGGTGCTTTCACAGAGGAGATAATCAAGGCTATGGCATCCTTCAATGAGAGACCTATAATCTTTGCTCTAAGTAACCCCACCAGCAAGGCAGAGTGCACTGCTGAGCAGTGCTACACACTCACTGAGGGACGGGGGATATTTGCAAGTGGAAGTCCCTTTGATGTGATAACCCTTCCCGATGGGCGAAAGTTCTACCCTGGTCAGGGCAACAACGCTTATGTGTTCCCTGGAGTGGGGCTGGGGGTAACCGCTTGTGCAATGAGACACATCCCTGAGAATATTTTCCTCGTTGCGGCTGAGGCTATAGCAGAACTGGTGACCGAGAAGAATCTTGCAGAGGGGCGTCTGTATCCTCCGCTCAACTGCATCCAGGAAGTGTCCTTCAAGCTGGCTGTGAAGATTGTGGAGTACGCCTACAAAAACAAAATGGCAACACTGCATCCGGAGCCGCATGATAAAGAGGCTTTTGTTCGTTCGCTCATCTACAGCACAG*ACTACGAAGAGTTTGCGGTAGATTCATACAGCTGGCCTGAAAATGCGATGACTGTCCAAACATGTACACTGTGAGCTCCCAAAATGAGATTTACATGACAATTCTCTTTTAAATGTGATCTCTTAACATGATTATAATATTAAACACTACTGTTAACCTTAAAATATCCTCAATAAAATGTCATGTATTA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|50743839|gb|CF661580.2|CF661580 TTCGGCCTTACGGCCGGGGGGACTGCTGGCTGCCCTTCGCATTACCAAGAGCAAAATGCACAACCATACCATTGTATTTCAGGGTGCAGGGGAGGCCGCAATGGGCATAGCTGAGCTCATCATTATGGCAATGGAGAAAGAGGGGCTTCCTCGTGAGCAGTGTATAAAGAAAATCTGGATGGTGGACTCTAAAGGTCTTATTGTTAAGGGTAGGGATCACCTCACCCATGAGAAAAAGAGGTTTGCACATGAGCATGCTCAAATGAAAAAGCTTGAGGATGTAGTGAAGGAGCTGAAACCCACTGCTATAATTGGGGTGGCAGCTATCACTGGTGCTTTCACAGAGGAGATAATCAAGGCTATGGCATCCTTCAATGAGAGACCTATAATCTTTGCTCTAAGTAACCCCACCAGCAAGGCAGAGTGCACTGCTGAGCAGTGCTACACACTCACTGAGGGACGGGGGATATTTGCAAGTGGAAGTCCCTTTGATGTGATAACCCTTCCCGATGGGCGGAAGTTCTACCCTGGTCAGGGCAACAACGCTTATGTLLLL gi|50741311|gb|CF662420.2|CF662420 AGGGTAGGGATCACCTCACCCATGAGAAAAAGAGGTTTGCACATGAGCATGCTCAAATGAAAAAGCTTGAGGATGTAGTGAAGGAGCTGAAACCCACTGCTATAATTGGGGTGGCAGCTATCACTGGTGCTTTCACAGAGGAGATAATCAAGGCTATGGCATCCTTCAATGAGAGACCTATAATCTTCGCTCTAAGCAACCCCACCAGCAAAGCAGAGTGCACTGCTGAGCAGTGCTACACACTCACTGAGGGACGGGGGATATTTGCAAGTGGAAGTCCCTTTGATGTGATAACCCTTCCCGATGGGCGGAAATTCTACCCTGGTCAGGGCAACAACGCTTATGTGTTTCCTGGAGTGGGGCTGGGGGTCACCGCTTGTGCAATGAGACATATCCCTGAGGATATATTCCTCATTACAGCTGAGGCTATAGCGGAACTGGTGACAGAGAAGGATCTTGCAGAGGGGCGTCTGTATCCTCCTCTCAACAGCATCCGGGAAGTTTCATTCAAGCTGGCTGTGAAGATCGTGGAGTACGCCTACAAAAACAAAATGGCAATGCTGCATCCGGAGCCACATGATAAAGAGGCTTTTGTTCATTCGCTCATCTTCAGCACAG*ACTACGAAGAGTTTGCAGTGGATTCGTACAGCTGGCCTGAGAATGCCATGGCTGTCCAAATGTGCAGACTGTGACCTCCCAAAATLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL gi|50740944|gb|CA967108.2|CA967108 LLLLLLLLLAGTCCCTTTGATCCAGTGACCCTTCCCGATGGGCGAAAGTTCTACCCTGGTCAGGGCAACAACGCTTATGTGTTCCCTGGAGTGGGGCTGGGGGTAACCGCTTGTGCAATGAGACACATCCCTGAGAATATTTTCCTCGTTGCGGCTGAGGCTATAGCAGAACTGGTGACCGAGAAGAATCTTGCAGAGGGGCGTCTGTATCCTCCGCTCAACTGCATCCAGGAAGTGTCCTTCAAGCTGGCTGTGAAGATTGTGGAGTACGCCTACAAAAACAAAATGGCAACACTGCATCCGGAGCCGCATGATAAAGAGGCTTTTGTTCGTTCGCTCATCTACAGCACAG*ACTACGAAGAGTTTGCGGTAGATTCATACAGCTGGCCTGAAAATGCGATGACTGTCCAAACATGTACACTGTGAGCTCCCAAAATGAGATTTACATGACAATTCTCTTTTAAATGTGATCTCTTAACATGATTATAATATTAAACACTACTGTTAACCTTAAAATATCCTCAATAAAATGTCATGTATT gi|50738876|gb|CA965508.2|CA965508 LLLLAGTCCCTTTGATCCAGTGACCCTTCCCGATGGGCGAAAGTTCTACCCTGGTCAGGGCAACAACGCTTATGTGTTCCCTGGAGTGGGGCTGGGGGTAACCGCTTGTGCAATGAGACACATCCCTGAGAATATTTTCCTCGTTGCGGCTGAGGCTATAGCAGAACTGGTGACCGAGAAGAATCTTGCAGAGGGGCGTCTGTATCCTCCGCTCAACTGCATCCAGGAAGTGTCCTTCAAGCTGGCTGTGAAGATTGTGGAGTACGCCTACAAAAACAAAATGGCAACACTGCATCCGGAGCCGCATGATAAAGAGGCTTTTGTTCGTTCGCTCATCTACAGCACAGGAGGGGGAAGAGTTTGCGGTAGATTCATACAGCTGGCCTGAAAATGCGATGACTGTCCAAACATGTACACTGTGAGCTCCCAAAATGAGATTTACATGACAATTCTCTTTTAAATGTGATCTCTTAACATGATTATAATATTAAACACTACTGTTAACCTTAAAATATCCTCAATAAAATGTCATGTATTA Putative SNPs: 494G>C, 495T>C, 496G>A, 497G>A, 499G>A, 517G>A 3. 100 200 300 400 500 600 700 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+........ Cyprinus_Cluster7885.seq.Contig1 GGAGCACTCCCGCTCCACCAGCGCAATGAGTGGTGTGGGCGATGACAAGTCAGAGGTGTCTGAGAATGTGGACCACCACGCATCCCTCTACAGCAATGGCTTTGGTGTCTCCGCTTTACACGGTTACACACAGACCAAGACGATTGAGGTTCAGCAGAGATCCTCCTCTGTGGCAACACAACAGACCACCGTTTCGTCTGTCCCCTCGCATCCTTCAACCACTGGAAAAACCGTCCGTGCCATGTATGACTACTCTGCTGCAGACAATGATGAGGTGTCCTTCAAGGACGGTGACGTCATTATGAACGTGCAGGCCATCGATGAGGGTTGGATGTATGGCACTGTGCAGCGTACTGGAAAGACCGGTATGCTGCCCGCCAACTATGTGGAAGCCATCTGAATACACCTAGTGTCCTCTCAAACACCCTTTGGATGAGGGAGCTT*GAGATCCACTCAAATGGAAAAAACGATTTAATGTGTACTAATGTTAGTCAAAGTAGTTATGCTTCTGTTTTATCCTCATTACTCTTAGGAAATTTCCTTTGTGCCCATGTCACAAAGTCTATTGTGGTTGTGGCATGAGAAACTGACAAATTATACATACCTATTTCAGTCACAGACAATTGTATTTATCTTTGTTGTTCTATTCTAGCAGTTAAGTAACTGGAGCCCATTATTTTTTGTATATTGCAATCACACTAAATTCAAAGAAGTTTTAACTTTGAAACATTTGCACT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ gi|50742737|gb|CF660638.2|CF660638 GGAGCACTCCCGCTCCACCAGCGCAATGAGTGGTGTGGGCGATGACAAGTCAGAGGTGTCTGAGAATGTGGACCACCACGCATCCCTCTACAGCAATGGCTTTGGTGTCTCCGCTTTACACGGTTACACACAGACCAAGACGATTGAGGTTCAGCAGAGATCCTCCTCTGTGGCAACACAACAGACCACCGTTTCGTCTGTCCCCTCGCATCCTTCAACCACTGGAAAAACCGTCCGTGCCATGTATGACTACTCTGCTGCAGACAATGATGAGGTGTCCTTCAAGGACGGTGACGTCATTATGAACGTGCAGGCCATCGATGAGGGTTGGATGTATGGCACTGTGCAGCGTACTGGAAAGACCGGTATGCTGCCCGCCAACTATGTGGAAGCCATCTGAATACACCTAGTGTCCTCTCAAACACCCTTTGGATGAGGGAGCTT*GAGATCCACTCAAATGGAAAAAACGATTTAATGTGTACT***GTTAGTCAAAGTAGTTATGCTTCTGTTTTATCCTCATTACTCTTAGGAAATTTCCTTTGTGCCCATGTCACAAAGTCTATTGTGGTTGTGGCATGAGAAACTGACAAATTATACATACCTATTTCAGTCACAGACAATTGTATTTATCTTTGTTGTTCTATTCTAGCAGTTAAGTAACTGGAGCCCATTATTTTTTGTATATTGCAATCACACTAAATTCAAAGAAGTTTTAACTTTGAAACATTTGCACT gi|50738231|gb|CA965036.2|CA965036 LLLLLLLLGAGTGGTGTGGGCGATGAGAAGTCAGAGGTGTCTGAGAACGTGGACCACCACGCATCCCTCTACAGCAATGGCTTTGGTGTCTCCGCTCTACACGGTTACACACAGACCAAGACAACTGAGGTTCAGCAGAGATCCTCCTCTGTGGCAACACAACAGACCACCGTTTCTTCTGTCCCCTCACATCCCTCAACCACTGGAAAAACTGTCCGTGCCATGTATGACTACCCTGCTGCAGACAATGATGAAGTGTCCTTCAAGGACGGTGATGTAATTGTGAACGTGCAGTCTATCGATGAGGGCTGGATGTATGGCACTGTGCAGCGTACTGGAAAGACCGGTATGCTCCCTGCCAACTATGTGGAAGCCATCTAAATACAACTACTGTGCTCTCAAACTCCCTGTGGATGACGGAGTTTTGATATCCACTCA****GAACAAGCTATTTTATGTGTACTAATGTTAGTCAA*GTAGTTCCGCTACTGTTTG*TCCTCATTACTGTTGGGAAATTTATTTTGTGCCCATGTCACAAAGTCTTTTGTGGTTGTGGCATGAGAAACTGACAAACTATACATACCTATTTAAGTCACAGACAATTGTATTTATCTTTGTTGTTCTATTCTAACAGTTAAGTAACTGGAGCCCATTATTTTT*GTATATTGCAATCACACTALLLLLL gi|50742778|gb|CF660653.2|CF660653 CGCAATGAGTGGTGTGGGCGATGATAAGTCAGAGGTGTCTGAGAATGTGGACCACCACGCATCCCTCTACAGCAATGGCTTTGGTGTCTCCGCTTTACACGGTTACACACAGACCAAGACGATTGAGGTTCAGCAGAGATCCTCCTCTGTGGCAACACAACAGACCACCGTTTCGTCTGTCCCCTCGCATCCTTCAACCACTGGAAAAACCGTCCGTGCCATGTATGACTACTCTGCTGCAGACAATGATGAGGTGTCCTTCAAGGACGGTGACGTCATTATGAACGTGCAGGCCATCAATGAGGGTTGGATGTATGGCACTGTGCAGCGTACTGGAAAGACCGGTATGCTGCCCGCCAACTATGTGGAAGCCATCTGAATACACCTAGTGTCCTCTCAAACACCCTTTGGATGAGGGAGCTT*GAGATCCACTCAAATGGAAAAAACGATTTAATGTGTACT***GTTAGTCAAAGTAGTTATGCTTCTGTTTTATCCTCATTACTCTTAGGAAATTTCCTTTGTGCCCATGTCACAAAGTCTATTGTGGTTGTGGCATGAGAAACTGACAAATTATACATACCTATTTCAGTCACAGACAATTGTATTTATCTTTGTTGTTCTATTCTAGCAGTTAAGTAACTGGAGCCCATTATTTTTTGTATATTGCAATCACACTAAATTCAAAGAAGTTTTAACTTT gi|50742740|gb|CF660639.2|CF660639 ATCCTCGTCTGTGGCAACACAACAGACCACCGATTCGTCTGTCCCCTCGCATCCTTCAACCACTGGAAAAACCGTCCGTGCCATGTATGACTACTCTGCTGCAGACAATGATGAGGTGTCCTTCCAGGACGGTGACGTCATTATGAACGTGCAGGCCATCGATGAGGGTTGGATGTATGGCACTGTGCAGCGTACTGAAAAGACCGGTATGCTGCCCGCCAACTATGTGGAATCCATCTGAATACACCTAGTGTCCTCTCTAACACCCTTTGGATGAGGGAGCTT*GAGATCCACTCAAATGGAAAAAACGATTTAATGTGTACT***GCTAGTCAAAGTAGTTCTGCTTCTGTTTTATCCTCATTACTCTTAGGAAATTTCCTTTGTGCCCATGTCACACAGTCTATTGTGGTTGTG Putative SNPs: 504A>C 4. 100 200 300 400 500 600 700 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+. Cyprinus_Cluster7889.seq.Contig1 GGGGGCTTGCTGTGGATTCGGTCTTGGTTGAGCTGTTGAGTTCCAAGTGCCAAAATGTCCAAACTCGGTTATTATCTTGAGCAGCTTTCCTATCAGGGAATGCAAGACAACACAGGGGGGCAGGGCACAGTGAGGCCTTTTGCTCAGTTTAATGCAGCTACCGATGCAGGTGTCTTGGACAAGGCTATCAAGACAAAAGGTGTGGATGAGGTCACAATCATTGAAACGCTGGTCCGCAGGAGCAATGCCCAGCGCCAGCAAATCAAGGCAGCTTACCAGCAAGCAAATGGCAAGCCTCTGGATGTAGCGCTGAAAGCTGCTCTTAAAGGTGAACTGGAAGAAGTGGTTCTGAGCTTGTTGATGACTCCAGCTCAATATGATTCTTTTCTGCTCAAAAGTGCCATGAAGGGTTTGGGCACAGATGAAGATACGCTTGTCGAGATTTTGGCCTCCAGGACCAATAAAGAGATCCAAGAGATTAAACAGGTTTTCAAACAAGAATATAAGAAGGATCTAGAGGCGGAGATCAAGTCTGAGACAAGTGGAGATTTCAGGAATGCCCTGCTTTCTCTCTGCAAGGCTACCAGAAGTGAAGACAGTTTTGTGCAAGAAGACTTGGCTGACAAAGATGCCAGGGCCATGTATGAGGCAGGAGAGAAAGAAAAGGCACAGACTGCGGCGTGTTCATTGACATCCTCACTTCAGGAATGCTTGTCACCTG ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|109280348|gb|EC392715.1|EC392715 GGGGGCTTGCTGTGGATTCGGTCTTGGTTGAGCTGTTGAGTTCCAAGTGCCAAAATGTCCAAACTCGGTTATTATCTTGAGCAGCTTTCCTATCAGGGAATGCAAGACAGCACAGGGGGGCAGGGCACAGTGAGGCCTTTTGCTCAGCTTAATGCAGCTACCGATGCAGGTGTCTTGGACAAGGCTATCAAGACAAAAGGTGTGGATGAGGTCACAATCATTGAAACGCTGGTCCGCAGGAGCAATGCCCAGCGCCAGCAAATCAAGGCAGCTTACCAGCAAGCAAATGGCAAGCCTCTGGATGTAGCGCTGAAAGCTGCTCTTAAAGGTGAACTGGAAGAAGTGGTTCTGAGCTTGTTGATGACTCCAGCTCAATATGATTCTTTTCTGCTCAAAAGTGCCTTGAAGGGTTTGGGCACAGATGAAGATACGCTTGTCGAGATTTTGGCCTCCAGGACCAATAAAGAGATCCAAGAGATTAAACAGGTTTTCAAACAAGAATATAAGAAGGATCTAGAGGCGGAGATCAAGTCTGAGACAAGTGGAGATTTCAGGAATGCCCTGCTTTCTCTCTGCAAGGCTACCAGAAGTGAAGACAGTTTTGTGCAAGAAGACTTGGCTGACAAAGATGCCAGGGCCATGTATGA gi|109280719|gb|EC392904.1|EC392904 GGGGGCTTGCTGTGGATTCGGTCTTGGTTGAGCTGTTGAGTTCCAAGTGCCAAAATGTCCAAACTCGGTTATTATCTTGAGCAGCTTTCCTATCAGGGAATGCAAGACAACACAGGGGGGCAGGGCACAGTGAGGCCTTTTGCTCAGTTTAATGCAGCTACCGATGCAGGTGTCTTGGACAAGGCTATCAAGACAAAAGGTGTGGATGAGGTCACAATCATTGAAACGCTGGTCCGCAGGAGCAATGCCCAGCGCCAGCAAATCAAGGCAGCTTACCAGCAAGCAAATGGCAAGCCTCTGGATGTAGCGCTGAAAGCTGCTCTTAAAGGTGAACTGGAAGAAGTGGTTCTGGGCTTGTTGATGACTCCAGCTCAATATGATTCTTTTCTGCTCAAAAGTGCCATGAAGGGTTTGGGCACAGATGAAGATACGCTTGTCGAGATTTTGGCCTCCAGGACCAATAAAGAGATCCAAGAGATTAAACAGGTTTTCAAACAAGAATATAAGAAGGATCTAGAGGCGGAGATCAAGTCTGAGACAAGTGGAGATTTCAGGAATGCCCTGCTTTCTCTCTGCAAGGCTACCAGAAGTGAAGACAGTTTTGTGCAAGAAGACTTGGCTGACAAAGATGCCAGGGCCATGTATGAGGCAGGAGAGAAAGAAAAGGCACAGACTGCGGCGTGTTCATTGACATCCTCACTTCAGGAATGCTTGTCACCTG gi|109284293|gb|EC394762.1|EC394762 LLLLGCTGTGGATTCGGTCTTGGTTGAGCTGTTGAGTTCCAAGTGCCAAAATGTCCAAACTCGGTTATTATCTTGAGCAGCTTTCCTATCAGGGAATGCAAGACAACACAGGGGGGCAGGGCACAGTGAGGCCTTTTGCTCAGTTTAATGCAGCTACCGATGCAGGTGTCTTGGACAAGGCTATCAAGACAAAAGGTGTGGATGAGGTCACAATCATTGAAACGCTGGTCCGCAGGAGCAATGCCCAGCGCCAGCAAATCAAGGCAGCTTACCAGCAAGCAAATGGCAAGCCTCTGGATGTAGCGCTGAAAGCTGCTCTTAAAGGTGAACTGGAAGAAGTGGTTCTGAGCTTGTTGATGACTCCAGCTCAATATGATTCTTTTCTGCTCAAAAGTGCCATGAAGGGTTTGGGCACAGATGAAGATACGCTTGTCGAGATTTTGGCCTCCAGGACCAATAAAGAGATCCAAGAGATTAAACAGGTTTTCAAACAAGAATATAAGGAGGATCTAGAGGCGGAGATCAAGTCTGAGACAAGTGGAGATTTCAGGAATGCCCTGCTTTCTCTCTGCAAGGCTACCAGAGGTGAAGACAGTTTTGTGCAAGAAGACTTGGC gi|109279507|gb|EC392282.1|EC392282 LLLLLCAAAAGGCGTGGATGAGCTCACAATCATTGAAACACTGGTCCGCAGGAGCAATGCCCAGCGCCAGCAAATCAAGGCCGCTTACCAGCAAACAGTCGGCAAGCCTCTGGATGTAGCCTTGAAAGCTGCTCTTAAAGGTGAGCTGGAAGAAGTGGTTCTGGGCCTGTTGATGACTCCAGCTCAGTATGATTCCTTTCTGCTCCATGGTGCCATGAAGGGTTTGGGCACAGATGAAGAAACACTTGTCGAGATTTTGGCCTCTAGGACCAATAAAGAGATTCAAGAGATTAAACAGGTTTTCAAACAAGAATATAAGAAGGATCTAGAGGCGGCGATCAAGTCTGAGACAAGTGGAGACTTCAGGAATGCCCTGCTTGCTCTCTGCAAGGCTACCAGAAGTGAAGACAAGGTTGTGCAAGAGGAGTTGGCTGACAAAGATGCCAGGGCCTTATATGAGGCAGG Putative SNPs: 352A>G 5. 100 200 300 400 500 600 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+...... Cyprinus_Cluster7892.seq.Contig1 GGGAGCGTACAAGTACATGCAGGAGCTCTGGAGGAAGAAGCAGTCGGACGTGATGAGGTTTCTGCTGCGTGTGCGGTGCTGGCAGTACCGTCAGCTGTCGGCCCTTCACCGGGCCCCGAGACCCACCAGACCCGATAAAGCCCGCAGACTGGGATACAAGGCCAAGCAGGGCTACGTCATCTACCGCATACGTGTGCGCCGTGGAGGCCGCAAGCGCCCCGTGCCTAAAGGTGCCACCTACGGCAAACCCGTGCACCACGGCGTCAACCAGATCAAGTTTGCACGCAGCCTGCAGTCAGTAGCTGAGGAGCGTGCGGGCCGTCACTGTGGAGGTCTGCGGGTGCTCAGCTCATACTGGGTGGGTGAAGACTCCACGTACAAGTTCTTCGAAGTGGTCCTCATCGACACCTTCCACAAAGCCATCAGACGCAACCCCGACACGCAATGGATCACCAAGGCTGTGCACAAGCACAGGGAGATGCGTGGGCTCACGTCTGCCGGCAAGAAGAGCCGTGGTTTGGGCAAGGGCCACAAGTTCCACCTCACCATCGGCGGCTCCCGGCGCGCGGCCTGGAAGAGACGCAACACCCTGCAGCTGCACCGTTACCGCTAGACAACGCGTGCT******GTACATTCACCCAAATAAAGTACCTTTGTATGCTA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ gi|50741012|gb|CA967210.2|CA967210 GGGAGCGTACAAGTACATGCAGGAGCTCTGGAGGAAGAAGCAGTCGGACGTGATGAGGTTTCTGCTGCGTGTGCGGTGCTGGCATTACCGTCGGGTGTCGGCCCTTCACCGGGCCCCTAGGCCCACCATACCCGATAAAGCCCGCAGGCTGGGATACAAGGCCAAGCAGGGGTACGTCATCTACCGCATACGTGTTCTCCGCGGAGGCCGCAAGCGCCCCGTGCCTAAAGGTGCCACC gi|50740916|gb|CA967306.2|CA967306 GGAGCGTACAAGTACATGCAGGAGCTCTGGAGGAAGAAGCAGTCGGACGTGATGAGGTTTCTGCTGCGTGTGCGGTGCTGGCAGTACCGTCAGCTGTCGGCCCTTCACCGGGCCCCGAGGCCCACCAGACCCGATAAAGCCCGCAGGCTGGGATACAAGGCCAAGCAGGGGTACGTCATCTACCGCATACGTGTTCGCCGTGGAGGCCGCAAGCGCCCCGTGCCTAAAGGTGCCACCTACGGCAAACCCGTGCACCACGGCGTCAACCAGATCAAGTTTGCACGCAGCCTGCAGTCAGTAGCTGAGGAGCGTGCGGGCCGTCACTGTGGAGGTCTGCGGGTGCTCAGCTCATACTGGGTGGGTGAAGACTCCACATACAAGTTCTTCGAAGTGGTCCTCATCGACACCTTCCACAAAGCCATCAGACGCAACCCCGACACACAATGGATCACCAAGGCTGTGCACAAGCACAGGGAGATGCGTGGGCTCACGTCTGCCGGCAAGAAGAGCCGTGGGTTGGGCAAGGGCCACAAGTTCCACCTCACCATCGGCGGTTCTCGGCGCGCGGCCTGGAAGAGACGCAACACCCTGCAGCTGCACCGTTACCGCTAAACAACGCCTGCTACAACTGTACATTTGCCCAAATAAAGTACCTTTGTATGCTL gi|109284267|gb|EC394747.1|EC394747 LLLLLLLLLLLTGAGGTTTCTGCTGCGCGTGCGGTGCTGGCAGTACCGTCAGCTGTCGGCCCTTCACCGGGCCCCGAGACCCACCAGACCCGATAAAGCCCGCAGACTGGGATACAAGGCCAAGCAGGGCTACGTCATCTACCGCATACGTGTGCGCCGTGGAGGCCGCAAGCGCCCCGTGCCTAAAGGTGCCACCTACGGCAAACCCGTGCACCACGGCGTCAACCAGATCAAGTTTGCACGCAGCCTGCAGTCAGTAGCTGAGGAGCGTGCGGGCCGTCACTGTGGAGGTCTGCGGGTGCTCAGCTCATACTGGGTGGGTGAAGACTCCACGTACAAGTTCTTCGAAGTGGTCCTCATCGACACCTTCCACAAAGCCATCAGACGCAACCCCGACACGCAATGGATCACCAAGGCTGTGCACAAGCACAGGGAGATGCGTGGGCTCACGTCTGCCGGCAAGAAGAGCCGTGGTTTGGGCAAGGGCCACAAGTTCCACCTCACCATCGGCGGCTCCCGGCGCGCGGCCTGGAAGAGACGCAACACCCTGCAGCTGCACCGTTACCGCTAGACAACGCGTGCT******GTACATTCACCCAAATAAAGTACCTTCGTATG gi|50743958|gb|CF661690.2|CF661690 LLLLLLLLLCCTTCACCGGGCCCCGAGACCCACCAGACCCGATAAAGCCCGCAGACTGGGATACAAGGCCAAGCAGGGCTACGTCATCTACCGCATACGTGTGCGCCGTGGAGGCCGCAAGCGCCCCGTGCCTAAAGGTGCCACCTACGGCAAACCCGTGCACCACGGCGTCAACCAGATCAAGTTTGCACGCAGCCTGCAGTCAGTAGCTGAGGAGCGTGCGGGCCGTCACTGTGGAGGTCTGCGGGTGCTCAGCTCATACTGGGTGGGTGAAGACTCCACGTACAAGTTCTTCGAAGTGGTCCTCATCGACACCTTCCACAAAGCCATCAGACGCAACCCCGACACGCAATGGATCACCAAGGCTGTGCACAAGCACAGGGAGATGCGTGGGCTCACGTCTGCCGGCAAGAAGAGCCGTGGTTTGGGCAAGGGCCACAAGTTCCACCTCACCATCGGCGGCTCCCGGCGCGCGGCCTGGAAGAAACGCAACACCCTGCAACTGCACCGTTACCGCTAGACAACGCGTGCT******GTACATTCACCCAAATAAAGTACCTTTGTATGCTA Putative SNPs: 121G>A, 148G>A, 172G>C, 196T>G 6. 100 200 300 400 500 600 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+ Cyprinus_Cluster7895.seq.Contig1 TTGGGGGACACAGACAAGATTAAAAACACGACACTGCGGTTCGAGAGAAGCCTTTGCTCGAGTCACGATGCTTCTCACGCTGCTTCTGATCTCCACGGCCGTTGCGAGTCCCCTGTTGGGTACGGAGCAGTGTGCCCGCGGTCCCCCCTACTGGTGCCAGAACGTCAAGACCGCTTCCCTTTGTGGTGCCGTCCAACACTGCCAACAGAATGTGTGGAGCAAGCCTCAGATGAAATCTGTGCCATGTGATCTGTGCAAAGAGGTGTTGATGGTGGTGGAGCAGCTTTTGAAGGACAATGCCACAGAGAGCGAACTCCTTGAATACATGGAGAAGGCCTGTCAGCTGATCCCTGATGAGGGCATGGCTGACCAGTGCAAGGAGATTGTGGACAACTATTTCCCCGTTCTCATGGACATCATCCAAGGAGAGCTGGACGACCCTGGTGTGGTGTGCTGTGCTCTTGGCCTGTGTGTGTCCCAGCAGGCAGCTCTGGCTAAAGCTCAGCTCATGTCCAATGAGATCCCTCCAGTGGACCTGAACCAGCGTGTCAACCCCTTCCTGATCAACATCCCTCAGCTGCTCTACCCCCAAGAGAAAACCAAG***GAGACCCCCAAACAGACGGATGGAGATGTGTGCCAAGACTGTGTTACGTTAAT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ gi|109284487|gb|EC394864.1|EC394864 TTGGGGGACACAGACAAGATTAAAAACACGACACTGCGGTTCGAGAGAAGCCTTTGCTCGAGTCACGATGCTTCTCACGCTGCTTCTGATCTCCACGGCCGTTGCGAGTCCCCTGTTGGGTACGGAGCAGTGTGCCCGCGGTCCCCCCTACTGGTGCCAGAACGTCAAGACCGCTTCCCTTTGTGGTGCCGTCCAACACTGCCAACAGAATGTGTGGAGCAAGCCTCAGATGAAATCTGTGCCATGTGATCTGTGCAAAGAGGTGTTGATGGTGGTGGAGCAGCTTTTGAAGGACAATGCCACAGAGAGCGAACTCCTTGAATACATGGAGAAGGCCTGTCAGCTGATCCCTGACGAGGGCCTGGCTGACCAGTGTAAGGAGATTGTTGACAACTACTTCCCCATTCTCATGGGCATCATCGAAGGAGAACTGGATGACCCCGGTGTGGTGTGCAGTGCTATGGGTCTGTGTGTGTCCCAGCAGGCAGCTCTGGCTAAAGCTCAGCTCATGTCCAACGAGATCCCTAAGGTGGACCTGAACCAGCGTGTCAGCCCCTTCCTGCTCAACATCCCTCAGCTGCTCTACCCCCAAGAGAATACCAAGAAGGAGACCCCCAAACAGACTGGTGGAGATGTGT gi|2924688|gb|C88406.1|C88406 ACGGAGCAGTGTGCTCTCGGTCCCCCCTACTGGTGCCAGAACGTCAAGACCGCTTCCCTTTGTGGTGCCGTCCAGCACTGCCAACAGAGTGTGTGGAGCAAGCCTCAGATGAAATCTGTGCCATGTGATCTGTGCAAAGAGGTGTTAGTGGTGGTGGAGCAGCTTTTGAAGGACAATGCCACAGAGAGCGAACTCCTTGGATACATGGAGAAGGCCTGTCAGCTGATCCCTGATGAGGGCATGGCTGACCAGTGCAAGGAGATTGTGGACAACTATTTCCCCGTTCTCATGGACATCATCCAAGGAGAGCTGGACGACCCTGGTGTGGTGTGCGGTGCTCTGGGCCTGTGTGTGTCCCAGCAGGCAGCTCTGGCTAAAGCTCAGCTCATGTCCAATGAGATCCCTCCAGTGGACCTGAACCAGCGTGTCAACCCCTTCCTGATCAACATCCCTCAGCTGCTCTACCCCCAAGA gi|50733349|gb|CA967516.2|CA967516 LLLGGAGAAGGCCTGTCAACTGATCCCTGATGAGGGCATGGCTGACCACTGCAAGGAGATTGTGGACAACTATTTCCCCGTTCTAATGGACATCATCCAAAGAAAGCTGGACGACCCTGGTGTGGTGTGCTGTGCTCTTGGCCTGTGTGTGTCCCACCAGGCACCTCTGGCTAAAGCTTAGCTCATGTCCAATGATATCCCTCCAGGAGACCTGAACCAGCGTGTCAACCCCTTCCTGATCAACATCCCTCAGCTGCTCTACCCCCAAGAGAAAACCAAG***GAGACCCCCAAACAAACGGATGGAGATGTGTGCCAAGACTGTGTTACGTTAAT gi|50738753|gb|CA965384.2|CA965384 CTGTCAACTGATCCCTGATGAGGGCTCGGCTGACCAGTGCAAGGAGATTGTGGACAACTATTTCCCCGTTCTCATGGACATCATCCAAGGAGAGCTGGACGACCCTGGTGTGGTGTGCTGGGCTCTTGGCCTGTGTGTGTCCCAACAGGCAGCTCTGGCTAAAGCTCAACTCATGTCCAATGAGATCCCTCCAGTGGACCTGAACCAGCGTGTCAACCCCTTCCTGATCAACATCCCTCAGCTGCTCTACCCCCAAGAGAAAACCAAG***GAGACCCCCAAACAGACGGATGGAAATGTGT Putative SNPs: 343G>A, 463G>T 7. 100 200 300 400 500 600 700 800 900 1000 1100 1200 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+...... Cyprinus_Cluster7896.seq.Contig1 CTCGGGCTCATTTCTGTCATCTTGTCCCCTTTGAAGGGCGATGGACGGGATATCTGTCTGGCCGCCGGGTTCTTTCCCGAAGAAAAGACTATGACTTTGACTGTGGAAGGTAAAAACCCTGTGAGCCTTACCACCAGAGAAGCACCCTTGTTTAAATCGACCAAAACCTATTATTATGCTGGATTCAGTGAAGATGATAAAGTGCAAACATGCGAAATGGATGGACAAACAGCAGACAAAACTCTTGACACTGCTGAAACGACAGAAAACCCTGAAAGAATGACTCAACAGACTTGTCCAACTAGTCTTAGTGCTGATGCCTTAGAGTTCATAAACACTGGTGATCCAAAAATGAACTCCATGAATCTTCTTGTGACAGGTCTGAGAATTCTGCTTGCTAAATGTGTCGCAGTTAATGCATTGATGACTGTGAAGGCATTCATATTTTAAAAGTTCAGTTCAGCCAAATCATTGGAATAATCAAAAATTGTAACTT*TGCTCATCAAGGCTGCATTTATTTGATCAAAAATATAGGAAACATTTAATATTGTGAAATATTGTTACCACTCGAAATAACCATTTATAATATACTGTAATATATTTTAAATTATAATTTAATTCTGTGATGCAGGACTGAATTTTCAGCATCATTACTCCAGTCTTCAGTGTCACATGATCCTTCAGAAATCATTCTAATATGCTGATTTGCTGTTCATGTTCCTGTTATTATCTATGTTCAGACACTTTGTGTCATGTCTTAGAACATGTTTGATCCCTGTAAAAATCACCATTATACATTTTTGCACATTTCCATTCAAGTTTTATACAGTAGAATAGGAGCTTTTAAGTACTATTTATAACGCTCACTCATTACATTTTGTAATTAAGAAAGAACAAATTTAAATAATACTGCAAATGAGCAGTCTGTTATGGCTAACCTCCTTCAGCACCAGGACACAGTTCCCAGGTCCCACACACTGCGGCAGCTCTGCAATACGGCCCTTATTGAGGTAGGGCCTTGAAAAGCAGCGATGGTTAAAATAGATCTTGGGGCAACAGTACTTCCCATTCGCTTGACCTGTTGGTGACACAGACAAGATTAAAATAGTACCATGTTAGAGACCCACTGAGCTTTTATTAGTGTGTAAACGGCTGACAAGGATGTGAAGAAATGTTCAGATGTGTATCTAGCACTTACCCATCTCAGCCTGACTGCTGTTAATCTGTAGTTTGGTAGTATCAGGTGAGGAGTCTT -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|50741865|gb|CF662790.2|CF662790 CTCGGGCTCATTTCTGTCATCTTGTCCCCTTTGAAGGGCGATGGACGGGATATCTGTCTGGCCGCCGGGTTCTTTCCCGAAGAAAAGACTATGACTTTGACTGTGGAAGGTAAAAACCCTGTGAGCCTTACCACCAGAGAAGCACCCTTGTTTAAATCGACCAAAACCTATTATTATGCTGGATTCAGTGAAGATGATAAAGTGCAAACATGCGAAATGGATGGACAAACAGCAGACAAAACTCTTGACACTGCTGAAACGACAGAAAACCCTGAAAGAATGACTCAACAGACTTGTCCAACTAGTCTTAGTGCTGATGCCTTAGAGTTCATAAACACTGGTGATCCAAAAATGAACTCCATGAATCTTCTTGTGACAGGTCTGAGAATTCTGCTTGCTAAATGTGTCGCAGTTAATGCATTGATGACTGTGAAGGCATTCATATTTTAAAAGTTCAGTTCAGCCAAATCATTGGAATAATCAAAAATTGTAACTT*TGCTCATCAAGGCTGCATTTATTTGATCAAAAATATAGGAAACATTTAATATTGTGAAATATTATTATGATGTAAAATACAAATTT*TC*TATTTTGGTATACATT**AAGATATAATTTATTTCTGTGATGCAGGACTGAATTTTCAGCATCATTGCTCCAGTCTTCAGTGTCACATGATCCTTCAGAAATCATTCTAATATGCCGATTTLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL gi|109278491|gb|EC391750.1|EC391750 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLTGTGACTTATGCTCATCAAAGATG**TTTATTTGATCAAAAATACAGAAAAAAACTAATATTGTGAAATATTGTTACCACTCGAAATAACCATTTATAATATACTGTAATATATTTTAAATTATAATTTAATTCTGTGAT*****ATTTTTTTTT*AGCATGATTACTCCAGTCTTCTGTGTCACATGATCCTTTAGAAATCATTCTGATATGCTGATTTGCTGCTCALLLLLLLLLLL gi|50743558|gb|CF661336.2|CF661336 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLTCACATGATCCTTCAGAAATCATTCTGGTATGCTGATTTGCTGTTCATGTTCCTGTTATTATCTATGTTCAGACACTTTGTGTCATGTCTTAGAACATGTTTGATCCCTGTAAAAATCACCATTATACATTTTTGCACATTTCCATTCAAGTTTTATACAGTAGAATAGGAGCTTTTAAGTACTATTTATAACGCTCACTCATTACATTTTGTAATTAAGAAAGAACAAATTTAAATAATACTGCAAATGAGCAGTCTGTTATGGCTAACCTCCTTCAGCACCAGGACACAGTTCCCAGGTCCCACACACTGCGGCAGCTCTGCAATACGGCCCTTATTGAGGTAGGGCCTTGAAAAGCAGCGATGGTTAAAATAGATCTTGGGGCAACAGTACTTCCCATTCGCTTGACCTGTTGGTGACACAGACAAGATTAAAATAGTACCATGTTAGAGACCCACTGAGCTTTTATTAGTGTGTAAACGGCTGACAAGGATGTGAAGAAATGTTCAGATGTGTATCTAGCACTTACCCATCTCAGCCTGACTGCTGTTAATCTGTAGTTTGGTAGTATCAGGTGAGGAGTCTT gi|13919130|gb|AU183389.1|AU183389 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLTCATTACTCCAGTCTTCAGTGTCACATGATCCTTCAGAAATCATTCTAATATGCTGATTTGGTGCTCALLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL Putative SNPs: 696A>G 8. 100 200 300 400 500 600 700 800 900 1000 1100 1200 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+......... Cyprinus_Cluster7898.seq.Contig1 CGCTCGGCTGTGTGGCTGGTGATGAGGAGTCCTACTAAGTCTTCAAGGAATTGTTTGACCCCATCATTTCTGACCGTCACGGTGGCATACAAGCCCACCGACAAGCACACTACTGATCTGAACTGGGAGAACCTGAAGGGTGGTGATGACCTTGACCCCAACTACGTTATGAGCACCCATGTGCGTACCGGCCGCAGCATCAAGGGATTCACCCTGCCTACCACCAACAGCCGTGGTGAGCGTAGAGCTGTGGAGAAGCTGTCCATTGAGGCTCTGAACAGCCTGGATGGCGAGTTCAAGGGCAAGTACTACCCTCTAAAGGACATGAGTGACAAGGAACAGGAGCAGCTCATTGCTGACCACTTCCTGTTTGACAAGCCTGTGTCCCCCCTGCTGTTGGCTGCTGGCATGGCTCGCGACTGGCCTGACGCAAGAGGCATCTGGCACAATGACAACAAGACCTTCCTGGTCTGGGTGAATGAGGAGGATCACCTGCGTGTCATCTCCATGCAGAAGGGTGGCAACATGAAGGAGGTCTTCAAGAGGTTCTGCGTTGGCCTGCAGAAGATTGAGGATGTCTTCAAGAAGCATAACCACGGTTTCATGTGGAACGAGCATCTTGGTTTCATCCTGACCTGCCCCTCTAACTTGGGCACCGGCCTGCGTGGTGGTGTCCATGTCAAGCTGCCCAAACTCAGCACACATGCCAAATTTGAGGAGATCCTGACCAGACTGCGTCTTCAGAAGCGTGGCACAG*GTGGTGTGGATACTGCCTCTGTTGG*TGG*TGTGTTCGACATCTCCAACGCTGATCGTCTGGGCTCCTCCGAGGCGCAGCAAGTGCAGCTG*GTGG*TCGATGGTGTGAAGCTCATGATTGAGACGGAAAAGAAACTGGAGAAGGGCGAGTCCATCGATGACATGATCCCTGCCCAGAAGTAAAATGGCAAAAGTGCTTTTCTTTTTTTTATTTGTTCTTTTAAGCAGTCATGCCATCCTGACTTTTCCAAGAGACACTCCACCCTGCTCCCTTTTTTCCTACTTTTTTTTCTCTTTCCTTTCTTCCCTGTTGTCTTCTTTTTCCTGCACTTTTCCTTATCTTCCTGTTCCTCCTGTAACATCCTGGGATCAAACCTCCACATAGCTAGAGAACCCTAGCTATGTTGTATTCACCTTAACTTTTTTTTTGGTTGTACAAAATTAATAAACGGCCCCATGTAACAATCGAAG ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|50743495|gb|CF661276.2|CF661276 CGCTCGGCTGTGTGGCTGGTGATGAGGAGTCCTACTAAGTCTTCAAGGAATTGTTTGACCCCATCATTTCTGACCGTCACGGTGGCATACAAGCCCACCGACAAGCACACTACTGATCTGAACTGGGAGAACCTGAAGGGTGGTGATGACCTTGACCCCAACTACGTTATGAGCACCCATGTGCGTACCGGCCGCAGCATCAAGGGATTCACCCTGCCTACCACCAACAGCCGTGGTGAGCGTATAGCTGTGGAGAAGCTGTCCATTGAGGCTCTGAACAGCCTGGATGGCGAGTTCAAGGGCAAGTACTACCCTCTAAAGGACATGAGTGACAAGGAACAGGAGCAGCTCATTGCTGACCACTTCCTGTTTGACAAGCCTGTGTCCCCCCTGCTGTTGGCTGCTGGCATGGCTCGCGACTGGCCTGACGCAAGAGGCATCTGGCACAATGACAACAAGACCTTCCTGGTCTGGGTGAATGACGAGGATCACCTGCGTGTCATCTCCATGCAGAAAGGTGGCAACTTGAACGAGGTCTTCAAGAGGTTCTGCGTTGGCCTGCAGAAGATTGAGGATGTCTTCAAGAAGCATAACCACGGTTTCATGTGGAACGAGCATCTTGGTTTCATCCTGACCTGCCCCTCTAACTTGGGTACCGGCCTGCGTGGTGGTGTCCATGTCAAGCTGCCCAAACTCAGCACACATGCCAAATTTGAAGACATCCTGACCAGACTGCGTCTTCAGAAGCGTGGCACAG*GTGGTGTGGATACTGCCTCTG gi|50743621|gb|CF661394.2|CF661394 ACTATGTTCTCAGTAGCCGTGTGCGTACTGGCCGCAGCATTAAGGGATATGCCCTGCCCCCCCACAACAGCCGTGGAGAGCGCAGAGCTGTGGAGAAGCTGTCTGTTGAAGCTCTGAACAGCTTGGATGGAGAATTCAAGGGCAAGTACTACCCCCTGAAATCCATGACTGATGCTGAGCAGGAGCAGCTGATCGCTGACCACTTCCTCTTTGACAAACCTGTCTCCCCCCTGCTGTTGGCTGCTGGTATGGCCCGCGACTGGCCCGATGCCAGAGGCATTTGGCACAATGAGAACAAGACCTTCCTGGTCTGGGTGAACGAGGAGGATCACCTGCGTGTCATTTCCATGCAGCAGGGTGGGAACATGAAGGAAGTGTTCAAGCGCTTCTGCGTTGGTCTTCAGAGGATTGAGGAGATTTTCAAGAAGCACAACCATGGATTCATGTGGAACGAGCATCTTGGTTTCATTCTGACCTGCCCCTCAAACTTGGGCACAGGCCTGCGTGGTGGTGTCCACGTCAAGCTGCCCAAGCTGAGCACACATCCCAAGTTTGAGGAGATCCTGACCAGACTGCGCCTGCAGAAGCGTGGCACAG*GTGGTGTGGACACCGCTTCCGTTGG*TGG*AGTGTTTGACATTTCCAATGCTGACCGTATTGGCTCTTCAGAGGTTGAGCAAGTGCAG*TGTGTGGGTTGATGGCGTTAAGCTGATGATTGAGATGGAGAAGAAGCTGGAGAAAGGCGAGTCCATCGACAGCATGATCCCTGCCCAGAAGTAAALLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL gi|50742222|gb|CF660374.2|CF660374 TTCACCCTGCCTACCACCAACAGCCGTGGTGAGCGTAGAGCTGTGGAGAAGCTGTCCATTGAGGCTCTGAACAGCCTGGATGGCGAGTTCAAGGGCAAGTACTACCCTCTAAAGGACATGAGTGACAAGGAACAGGAGCAGCTCATTGCTGACCACTTCCTGTTTGACAAGCCTGTGTCCCCCCTGCTGTTGGCTGCTGGCATGGCTCGTGACTGGCCTGACGCAAGAGGCATCTGGCACAATGACAACAAGACCTTCCTGGTCTGGGTGAATGAGGAGGATCACCTGCGTGTCATCTCCATGCAGAAGGGTGGCAACATGAAGGAGGTCTTCAAGAGGTTCTGCGTTGGCCTGCAGAAGATTGAGGATGTCTTCAAGAAGCATAACCACGGTTTCATGTGGAACGAGCATCTTGGTTTCATCCTGACCTGCCCCTCTAACTTGGGCACCGGCCTGCGTGGTGGTGTCCATGTCAAGCTGCCCAAACTCAGCACACATGCCAAATTTGAGGAGATCCTGACCAGACTGCGTCTTCAGAAGCGTGGCACAGNGTGGTGTGGATACTGCCTCTGTTGGNTGGGTGTGTTCGACATCTCCAACGCTGATCGTCTGGGCTCCTCCGAGGTGCAGCAGNTGCAGCTG*GTGG*TCGATGGTGTGAAGCTCATGATTGAAATGGAAAAGAAACTGGAGAAGGGCGAGTCCATCGATGACATGATCCCTGCCCAGAAGTAAAATGGCAAAAGTGCTTTTCTTTTTTTTATTTGTTCTTTTAAGCAGTCATGCCATCCTGACTTTTCCAAGAGACACTCCACCCTGCTCCCTTTTTTCCTACTTTTTTTTCTCTTTCC gi|50744323|gb|CF662032.2|CF662032 CTGCCCAAACTCAGCACACATGCCAAATTTGAGGAGATCCCGACCAGACTGCGTCTTCAGAAGCGTGGCACAG*GTGGTGTGGATACTGCCTCTGTTGG*TGG*TGTGTTCGACATCTCCAACGCTGATCGTCTGGGCTCCTCCGAGGCGCAGCAAGTGCAGCTG*GTGG*TCGATGGTGTGAAGCTCATGATTGAGACGGAAAAGAAACTGGAGAAGGGCGAGTCCATCGATGACATGAACCCTGCCCAGAAGTAAAATGGCAAAAGTGCTTTTCTTTTTTTTATTTGTTCTTTTAAGCAGTCATGCCATCCTGACTTTTCCAAGAGACACTCCACCCTGCTCCCTTTTTTCCTACTTTTTTTTCTCTTTCCTTTCTTCCCTGTTGTCTTCTTTTTCCTGCACTTTTCCTTATCTTCCTGTTCCTCCTGTAACATCCTGGGATCAAACCTCCACATAGCTAGAGAACCCTAGCTATGTTGTATTCACCTTAACTTTTTTTTTGGTTGTACAAAATTAATAAACGGCCCCATGTAACAATCGAAG Putative SNPs: NULL 9. 100 200 300 400 500 600 700 800 900 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.. Cyprinus_Cluster7909.seq.Contig1 AAGCAGCTGCTACTTTGTTAAACAGTCATTTACATATTTATTTTCGCTTTAGTCTCCACCATGTCACCAAATAATTCATACTTAAAGGCTTAAGTTATTTATTTTAATCTAACCTAAAACATGGCCTACCTATATATTAACTGATTCAATATTATTTTTCGGTAACATTTAACAGGTTACGTAAGTTAACATGAAATAATAGTGTCTGGATTTATTAATCTTAGTTCATGTTAATTTCAACTTTTAATAATCCTTTATAAAATCAACAGTTGTGTCTGCTAATATATTATTTAATGGAGCTAACATGAACTAACAATAAATAGTTGTCTTTGTATTAACAAACATTAACAAATAATATTAACTACTGCACCAATTAGCAATTCCACACTGTTAGTTAATGTTAACCTGCTTTAACTAAGGGTGTATTCACACCTGTCTTGTTTGGTAAGACTGAATCAAATTTAAGTTAATCTCCCCTCTTGCTGCGGATCTTTTGGGTAGGTGTGAATATAACAAATCGCATTTGGGTGCGGACCAAACAACCGTACTGAGACCCGGCTGAAGAGGTGGTCTCGGTCCACTTTCCAAACGAACTCTGGTACGGTTGAATGGACGAACCAATGAATGGATGACCTCAAACACACATGTTGTTTTGTTTACAATTGCTGGTTCACTGTACTGTGATAAAAGCTTCAACAACTATTGTGAAAATTTGATACCATCACATACCTAATGTACATACAATTTAATAGGATTATAAATAATTACATAATTAGCCTATTAAAGTTCCCCTATTATGCCTTTTTGAACATTACCTTTCATGCAGTGTGTAATGCAGCTGTATGTGAACATAAACTATCTGCAAAGTTGTGAAGCCGACAGTGCACGATAAATAAAGCTAGTCTATTATAT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ gi|50743513|gb|CF661293.2|CF661293 AAGCAGCTGCTACTTTGTTAAACAGTCATTTACATATTTATTTTCGCTTTAGTCTCCACCATGTCACCAAATAATTCATACTTAAAGGCTTAAGTTATTTATTTTAATCTAACCTAAAACATGGCCTACCTATATATTAACTGATTCAATATTATTTTTCGGTAACATTTAACAGGTTACGTAAGTTAACATGAAATAATAGTGTCTGGATTTATTAATCTTAGTTCATGTTAATTTCAACTTTTAATAATCCTTTATAAAATCAACAGTTGTGTCTGCTAATATATTATTTAATGGAGCTAACATGAACTAACAATAAATAGTTGTCTTTGTATTAACAAACATTAACAAATAATATTAACTACTGCACCAATTAGCAATTCCACACTGTTAGTTAATGTTAACCTGCTTTAACTAAGGGTGTATTCACACCTGTCTTGTTTGGTAAGACTGAATCAAATTTAAGTTAATCTCCCCTCTTGCTGCGGATCTTTTGGGTAGGTGTGAATATAACAAATCGCATTTGGGTGCGGACCAAACAACCGTACTGAGACCCGGCTGAAGAGGTGGTCTCGGTCCACTTTCCAAACGAACTCTGGTACGGTTGAATGGACGAACCAATGAATGGATGACCTCAAACACACATGTTGTTTTGTTTACAATTGCTGGTTCACTGTACTGTGATAAAAGCTTCAACAACTATTGTGAAAATTTGATACCATCACATACCTAATGTACATACAATTTAATAGGATTATAAATAATTACATAATTAGCCTATTAAAGTTCCCCTATTATGCCTTTTTGAACATTACCTTTCATGCAGTGTGTAATGTAGCTGTATGTGAACATAAACTATCTGCAAAGTTGTGAAGCCGACAGTGCACGATAAATAAAGCTAGTCTATTATAT gi|50743512|gb|CA966626.2|CA966626 AAGCAGCTGCTACTTTGTTTAACAGTCATTTACATATTTATTTTCGCTTTAGTCTCCACCATGTCACCAAATAATTCATACTTAAAGGCTTAAGTTATTTATTTTAATCTAACCTAAAACATGGCCTACCTATATATTAACTGATTCAATATTATTTTTCGGTAACATTTAACAGGTTACGTAAGTTAACATGAAATAATAGTGTCTGGATTTATTAATCTTAGTTCATGTTAATTTCAACTTTTAATAATCCTTTATAAAATCAACAGTTGTGTCTGCTAATATATTATTTAATGGAGCTAACATGAACTAACAATAAATAGTTGTCTTTGTATTAACAAACATTAACAAATAATATTAACTACTGCACCAATTAGCAATTCCACACTGTTAGTTAATGTTAACCTGCTTTAACTAAGGGTGTATTCACACCTGTCTTGTTTGGTAAGACTGAATCAAATTTAAGTTAATCTCCCCTCTTGCTGCGGATCTTTTGGGTAGGTGTGAATATAACAAATCGCATTTGGGTGCGGACCAAACAACCGTACTGAGACCCGGCTGAAGAGGTGGTCTCGGTCCACTTTCCAAACGAACTCTGGTACGGTTGAATGGACGAACCAATGAATGGATGACCTCAAACACACATGTTGTTTTGTTTACAATTGCTGGTTCACTGTACTGTGATAAAAGCTTCAACAACTATTGTGAAAATTTGATACCATCACATACCTAATGTACATACAATTTAATAGGATTATAAATAATTACATAATTAGCCTATTAAAGTTCCCCTATTATGCCTTTTTGAACATTACCTT gi|50743410|gb|CF661197.2|CF661197 AAGCAGCTGCTACTTTGTTAAACAGTCATTTACATATTTATTTTCGCTTTAGTCTCCACCATGTCACCAAATAATTCATACTTAAAGACTTAAGTTATTTATTTTAATCTAACCTAAAACATGGCCTACCTATATATTAACTGATTCAATATTATTTTTCGGTAACATTTAACAGGTTACGTAAGTTAACATGAAATAATAGTGTCTGGATTTATTAATCTTAGTTCATGTTAATTTCAACTTTTAATAATCCTTTATAAAATCAACAGTTGTGTCTGCTAATATATTATTTAATGGAGCTAACATGAACTAACAATAAATAGTTGTCTTTGTATTAACAAACATTAACAAATAATATTAACTACTGCACCAATTAGCAATTCCACACTGTTAGTTAATGTTAACCTGCTTTAACTAAGGGTGTATTCACACCTGTCTTGTTTGGTAAGACTGAATCAAATTTAAGTTAATCTCCCCTCTTGCTGCGGATCTTTTGGGTCGGTGTGAATATAACAAATCGCATTTGGGTGCGGACCAAACAACCGTACTGAGACCCGGCTGAAGAGGTGGTCTCGGTCCACTTTCCAAACGAACTCTGGTACGGTTGAATGGACGAACCAATGAATGGATGACCTCAAACACACATGTTGTTTTGTTTACAATTGCTGGTTCACTGTACTGTGATAAAAGCTTCAACAACTATTGTGAAAATTTGATACCATCACATACCTAATGTACATACAATTTAATAGGATTATAAATAATTACATAATTAGCCTATTAAAGTTCCCCTATTATGCCTTTTTGAACATTACCTTTCATGCAGTGTGTAATGCAGCTGTATGTGAACATAAACTATCT gi|50743413|gb|CF661199.2|CF661199 AAGCAGCTGCTACTTTGTTAAACAGTCATTTACATATTTATTTTCGCTTTAGTCTCCACCATGTCACCAAATAATTCATACTTAAAGACTTAAGTTATTTATTTTAATCTAACCTAAAACATGGCCTACCTATATATTAACTGATTCAATATTATTTTTCGGTAACATTTAACAGGTTACGTAAGTTAACATGAAATAATAGTGTCTGGATTTATTAATCTTAGTTCATGTTAATTTCAACTTTTAATAATCCTTTATAAAATCAACAGTTGTGTCTGCTAATATATTATTTAATGGAGCTAACATGAACTAACAATAAATAGTTGTCTTTGTATTAACAAACATTAACAAATAATATTAACTACTGCACCAATTAGCAATTCCACACTGTTAGTTAATGTTAACCTGCTTTAACTAAGGGTGTATTCACACCTGTCTTGTTTGGTAAGACTGAATCAAATTTAAGTTAATCTCCCCTCTTGCTGCGGATCTTTTGGGTCGGTGTGAATATAACAAATCGCATTTGGGTGCGGACCAAACAACCGTACTGAGACCCGGCTGAAGAGGTGGTCTCGGTCCACTTTCCAAACGAACTCTGGTACGGTTGAATGGACGAACCAATGAATGGATGACCTCAAACACACATGTTGTTTTGTTTACAATTGCTGGTTCACTGTACTGTGATAAAAGCTTCAACAACTATTGTGAAAATTTGATACCATCACATACCTAATGTACATACAATTTAATAGGATTATAAATAATTACATAATTAGCCTATTAAAGTTCCCCTATTATGCCTTTTTGAACATTACCTTTCATGCAGTGTGTAATGCAGCTGTATGTGAACATAAACTATCTGC Putative SNPs: 88G>A, 500A>C 10. 100 200 300 400 500 600 700 800 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.... Cyprinus_Cluster7918.seq.Contig1 GGGGAGTGGCCATTACGCCGGGGGGGCTAAAGCTCTCATGTGATGAGATCTCACACAATGTTACTGTAATGCTGTTGTTATGAGCTGCTAGCAGGGTTGAAGATGAACAGGCTGATTTTACCGGTTCTGTTTGCAGTTCTCTATCAGGTGCATACATTGCCACTGCACACTGAGGAAGATGAGTATCTTTTCAAATCATGGATGTCTCAGTATAACAAAAAATATGAGATAAATGAATACTACCAGCGGCTACAGACATTCCTGGAGAACAAGAAGAAGATTGAGCACCATAATGCAGGAAACCACAAGTTTTCAATGGGACTGAATCGGTTTTCAGACATGACCTTTACTGAATTTAAAAAGTCCTACCTCCTGACAGAACCTCAGAACTGCTCCGCCACTAGAGGGAACCATGTGAGCAGTAATGGGCCTTATCCTGATATGATTGACTGGAGAACGAAAGGACACTATGTAACTGATGTCAAGAACCAGGGAGCTTGTGGTAGCTGCTGGACTTTTTCCACCACAGGCTGTCTGGAGTCTGTCACTGCTATTGCCACAGGAAAACTCCTACAACTAGCAGAGCAGCAGCTTGTTGATTGTGCACGTGCTTTCGACAATCATGGCTGCAATGGTGGCCTCCCAAGTCACGCCTTTGAGTACATCATGTACAACAAAGGTCTTATGACAGAACAAGATTACCCCTATAAGGCTATACAAGGTGAATGTAGATTCAAACCAGAGTTGGCTGCTGCCTTTGTGAAGGATGTTGTAAACATTACAAAGTATGATGAAATGGGCATGGTGGATGCTGTGGCCAGGTT -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|50733438|gb|CA967608.2|CA967608 GGGGAGTGGCCATTACGCCGGGGGGGCTAAAGCTCTCATGTGATGAGATCTCACACAATGTTACTGTAATGCTGTTGTTATGAGCTGCTAGCAGGGTTGAAGATGAACAGGCTGATTTTACCGGTTCTGTCTGCAGTTCTCTATCAGGTGCATACATTGCCACTGCACACTGAGGAAGATGAGGGTCTTTTCAAATCATGGATGTCTCAGTATAACAAAAAATATGAGATAAATGAATACTACCAGCGGCTACAGACATTCCTGGAGAACAAGAAGGAGATTGAGCACCATAATGCAGGAAACCACAAGTTTTCAATGGGACTGAATCGGTTTTCAGACATGACCTTTACTGAATTTAAAAAGTCCTACCTCCTGACAGAACCTCAGAACTGCTCCGCCACTAGAGGGAACCATGTGAGCAGTAACGGGCCTTATCCTGATATGATTGACTGGAGAACGAAAGGACACTATGTAACTGATGTCAAGAACCAGGGAGCTTGTGGTAGCTGCTGGACTTTTTCCACCACAGGCTGTCTGGAGTCTGTCACTGCT gi|50733802|gb|CA967756.2|CA967756 LLLLGTGATGAGATCTCACATAATGTTACTGTAATGCTGTTGTTATGAGCTGCTAGCAGGGTTGAAGATGAACAGGCTGATTTTACCGGTTCTGTTTGCAGTTCTCTATCAGGTGCATACATTGCCACTGCACACTGAGGAAGATGAGTATCTTTTCAAATCATGGATGTCTCAGTATAACAAAAAATATGAGATAAATGAATACTACCAGCGGCTACAGACATTCCTGGAGAACAAGAAGAAGATTGAGCACCATAATGCAGGAAACCACAAGTTTTCAATGGGACTGAATCGGTTTTCAGACATGACCTTTACTGAATTTAAAAAGTCCTACCTCCTGACAGAACCTCAGAACTGCTCCGCCACTAGAGGGAACCATGTGAGCAGTAATGGGCCTTATCCTGATATGATTGACTGGAGAACGAAAGGACACTATGTAACTGATGTCAAGAACCAGGGAGCTTGTGGTAGCTGCTGGACTTTTTCCACCACAGGCTGTCTGGAGTCTGTCACTGCTATTGCCACAGGAAAACTCCTAC gi|4806255|gb|AU062371.1|AU062371 CTGCTAGCAGGGTTGAAGATGAACACGTTGTTTTTACCGATGCTGTTTGCCGTTGTGTATCAGGTGCATACATTACCATTGCACACTGAGGAAGATGAGTATCTTTTCAAATCGTGGATGTCTCAGTATAACAAAAAATATGAGATAAATGAATACTACCAGCGACTACAGATTTTCCTGGACAACAAGAAGAAGATTGAGCGCCATAATGCAGGAAACCATAAGTTTTCAATGGGACTGAATCAGTTTTCAGACATGACATTTGCTGAATTTAAAAAGTCCTACCTCCTGACAGAACCTCAGAACTGCTCCGCCACTAGAGGGAACCATCTGAGCAGTAATGGGCCTTATCCTGATACGATTGACTGGAGAACGAAAGGAAACTATGTAACTAATGTCAAGAATCAGGGACCTTGTGGTAGCTGCTGGACTTTTTCCACCACAAGCTGTCTGGAGTCCGTCACTGCTATAGCCACAGGGAAACTCCTACAACTAGCAGAGCAGCAGCTTGTAGATTGTGCAGGTGCTTTCGACAATCATGGCTGCAATGGTGGCCTNCCAAGTCATGCTTTTGAGT gi|50743866|gb|CF661604.2|CF661604 ATGCGTATCATTACAAATCATGGATGTCTCACTATAACAAAAAATATGAGATAAATGAATAATACCAACGGCTACAGACATTCCTGGAGAACAAGAAGAAGATTGAACACCATAATGCAGGAAACCACAAGTTTTCAATGGGACTGAATCGGTTTACACACATGACCTTTACTGAATTTAAAAAGTCCTACCTCCTGACAGAACCTCAGAACTGCTCCGCCACTAGAGTGAACCATGTGAGCAGTAATGGGCCTTATCCTGATACGATTGACTGGAGAACGAAAGGACACTATGTAACTGATGTCAAGAACCAGGGAGCTTGTGGTAGCTGCTGGACTTTTTCCACCACAGGCTGTCTGGAGTCTGTCACTGCTATTGCCACAGGAAAACTCCTACAACTAGCAGAGCAGCAGCTTGTTGATTGTGCACGTGCTTTCGACAATCATGGCTGCAATGGTGGCCTCCCAAGTCACGCCTTTGAGTACATCATGTACAACAAAGGTCTTATGACAGAACAAGATTACCCCTATAAGGCTATACAAGGTGAATGTAGATTCAAACCAGAGTTGGCTGCTGCCTTTGTGAAGGATGTTGTAAACATTACAAAGTATGATGAAATGGGCATGGTGGATGCTGTGGCCAGGTT Putative SNPs: 443T>C 11. 100 200 300 400 500 600 700 800 900 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.... Cyprinus_Cluster7921.seq.Contig1 AGCGGGGACTGTTTCCTGGTAAGAGAAAGGATATAAGTCTTTACTCGAGCAGTTGTGTACATTTCATCAAACAATCGCGCACCTGAAGAGGAATAAACATGGGGAAATCAGTCACTGTGGTTCACTGGCTTCTGC*TCACGCTGGGACTAGTTGCGGCTCAAGCAGAGAAAGCAGAGCAAGTGCTGCCAAACTGGCTTACGGGAATCATTGCCGTTGGTGTGTTCCTCTTTCTGATCTTCGTCACCTTCCTTGTAAACAAAGCCTGGTGTGAAACTCCAAGCAAACCAGAAGCAGTACCCATTGAATACGCCATGACCAATGTATCAAC********CC*GTCTTGACGCAGTCAGGAGCATCGACGACCCTAACGCATACGAGAACGCGATTGTTCACCAAACCGATGAAAAAGCGACTGAGATGTAGACTAACCTCAAGGAAACGTCCACAA****CC*AGTCAGCACGCCATGTTAACCTTATTTTTTTTTTTGTTGTTGTAATAAGTTATAATTTTAATAGCTGACACAGCTTAGCAGTGTTTTTTTTTTTTTTTTTTAATATACATTTTAATATAACATCAGACATTCAGTATATCACTTGTTGTGCAGACCTCTTTAAATAATATTTAAAAAAAATTCAATAATAGGCCCTAATATTAATAAAATCATATATGCTACCATTCAAAAATCTTGGTTTGGTAGGATTTTTAAATGTTTTTGTAGGTTGCATACATTATAATGCTATTTTAATATGCATTTTAAATGTAATTTTTTTCCTGTGATGCAAAGCTAAGTTTTACGCAGTCTTTATTACAATCTTCAGTGTCATATGTTCTGATTTGCTGTCCAAGAAACAATTATTTTCAATGTTGAAAACAGTTGTGCTGATTAATATTTTAGTAAAATATTTTATTGTTAAAACAAATGTTACCATTGCTAATCTTTTAAA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ gi|50739744|gb|CA966261.2|CA966261 AGCGGGGACTGTTTCCTGGTAAGAGAAAGGATATAAGTCTTTACTCGAGCAGTTGTGTACATTTCATCAAACAATCGCGCACCTGAAGAGGAATAAACATGGGGAAATCAGTCACTGTGGTTCACTGGCTTCTGCGTCACGCTGGGACTAGTTGCGGCTCAAGCAGAGAAAGCAGAGCAAGTGCTGCCAAACTGGCTTACGGGAATCATTGCCGTTGGTGTGTTCTTCTTTCTGATCTTCGTCACCTTCCTTGTAAACAAAGCCTGGTGTGAAACTCCAAGCAAACCAGAAGCAGTACCCATTGAATACGCCATGACCAATGTATCAAC********CC*GTCTTGACGCAGTCAGGAGCATCGACGACCCTAACGCATACGAGAATGCGATTGTTCACCAAACCGATGAAAAAGCGACTGAGATGTAGACTAATCTCAAGGAAACGTCCACAA****CC*AGTCAGCACGCCATGTTAACCTTATTTTTTT****GTTGTTGTAATAAGTTATAATTTTAATACCTG gi|50742250|gb|CF660400.2|CF660400 ACTGTTTCCTGGTAAGAGAA*GGA*ATAAGTCTTTACTTGAGCAGTTGTGTACATTTCATCAAACAATCGCGCACCTGAAGAGGAATAAACATGGGGAAATCAGTCACCGTGGTTCACAGGCTTCTGC*TCACGCTGGGACTAGTCGCGGCTCAAGCAGAGAAAGCAGAGCAAGTGCTGCCAAACCGGCTTACGGGAATCATCGCCGTCGGTGCGTTCCTCTTTCTGATCTTCGTCACCTTCCTCGTAAACAAAGCCTGGTGTGAAACTCCAAGCAAACCAGAAGCAGTACCCATTGAATACGCCATGACCAATGTATCAAC********CC*GTCTTGACGCAGTCAGGAGCATCGACGACCCTAACGCATACAAGAACGCGATTGTTCACCAAACCGATGAAAAAGCGACTGAGATGTAGACTAACCTCAAGGAAACGTCCACAA****CC*AGTCAGCACGCCATGTTAACCTTATTTTTTTTTT*GTTGTTGTAATAAGTTATAATTTTAATAGCTGACACAGCTTAGCAGTGTTTTTTTTTTTTTTTT**AATATACATTTTAATATAACATCAGACATTCAGTATATCACTTGTTGTGCAGACCTCTTTAAATAATATTTAAAAAAAATTCAATAATAGGCCCTAATATTAATAAAATCATATATGCTACCATTCAAAAATCTTGGTTTGGTAGGAATTTTAAATGTTTTTGTAGGTTGCATACATTATAATGCTATTTTAATATGCATTTTAAATGTAATTTTTTTCCTGTGATGCAAAGCTAAGTTTTACGCAGTCTTTATTACAATCTTCAGTGTCATATGTTCTGATTTGCTGTCCAAGAAACAATTATTTTCAATGTTGAAAACAGTTGTGCTGLLL gi|50742085|gb|CF662956.2|CF662956 LLLLLACATTTCATCAAACAATCGCGCACCTGAAGAGGAATAAACATGGGGAAATCAGTCACTGTGGTTCACTGGCTTCTGC*TCACGCTGGGACTAGTTGCGGCTCAAGCAGAGAAAGCAGAGCAAGTGCTGCCAAACTGGCTTACGGGAATCATTGCCGTTGGTGTGTTCCTCTTTCTGATCTTCGTCACCTTCCTTGTAAACAAAGCCTGGTGTGAAACTCCAAGCAAACCAGAAGCAGTACCCATTGAATACGCCATGACCAATGTATCAAC********CC*GTCTTGACGCAGTCAGGAGCATCGACGACCCTAACGCATACGAGAACGCGATTGTTCACCAAACCGATGAAAAAGCGACTGAGATGTAGACTAACCTCAAGGAAACGTCCACAA****CC*AGTCAGCACGCCATGTTAACCTTATTTTTTTTTTTGTTGTTGTAATAAGTTATAATTTTAATAGCTGACACAGCTTAGCAGTGTTTTTTTTTTTTTTTTTTAATATACATTTTAATATAACATCAGACATTCAGTATATCACTTGTTGTGCAGACCTCTTTAAATAATATTTAAAAAAAATTCAATAATAGGCCCTAATATTAATAAAATCATATATGCTACCATTCAAAAATCTTGGTTTGGTAGGATTTTTAAATGTTTTTGTAGGTTGCATACATTATAATGCTATTTTAATATGCATTTTAAATGTAATTTTTTTCCTGTGATGCAAAGCTAAGTTTTACGCAGTCTTTATTACAATCTTCAGTGTCATATGTTCTGATTTGCTGTCCAAGAAACAATTATTTTCAATGTTGAAAACAGTTGTGCTGATTAATATTTTAGTAAAATATTTTATTGTTAAAACAAATGTTACCATTGCTAATCTTTTAAA gi|50742231|gb|CF660383.2|CF660383 AAAAATGGGGAAATCAGTCACAGTGCTTCACTGGCTTGTCC*TCACTCTGGGACTAGTTGCGGCTCAAGCAGAGAAAGCTGAGCAAGCTCTGCCAAACTGGCTCACGGGAATCATCGCCGTTGCTGTTTTCCTTCTTCTCGTCTTCATCGTCTTCCTTGTGAACAAAGCCTGGTGTGAAACCCCAAGCGAACCAGAAGCAGTGCCCACCGAATACGCCATGACTAATGGATCAACATGTGAAACCAGTCTGGACGCAGTCAGGAGCAGTGAAGACCCTAAAGCATATGAGAACGCGATAGTTCACCAAACAGATGAAAAAGTGACCAAGATGTA*A*T***CTCAAGGAAACCTCCACAATCAGCCGAGTCAGCACCCCATGTTAACCTTACTTTTT*****GTTGTA**AATAAGTTATCATTTTAATAGCTGACACAGCTLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL Putative SNPs: 210T>C 12. 100 200 300 400 500 600 700 800 900 1000 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|..... Cyprinus_Cluster7927.seq.Contig1 AGTCTGATTCTGACCATCACAGCAGCACAGACGACGCATCAGATGCAGGTTCCATATCCATCGCTGATCTTTCCGAATCAGACTTATTTTTTGACCCGACCGAAGAGGCCTTGTGTAAAGAAGTGGTGCAGCTCATCGCACTTAACCTGACCGACGCCAAAGACGGCGTCTTGCACTGTTCCAAGCTGCTGATTCCCGAGACGCTCCTGGAGCACATCGGCCAGGAGCTGGTGCATCTGTCGGTCAGCGAGCCCTGCGGCCTTCGCGGTGCCCTCGTTGACCTCTGCGTGGAGCAGGATGGCAGCTGCGAAGCCGTGGGACAAATCTCAGTCGACCCGTACCTAGTGCCCACCTTCCAGCTCACACTCGTGCTGAGGCTCGACTCCAGGGGCTTTTGGCCAAAAA*TCCAGGGGCTTTTCGCCGGCAGATCGCCTTCGTCTCCGGTTGTTAGACGTGCACTTAAACTGAGCACTGGATTCAGAGTTATTAAGAGAAAACTGTACAGCTCTGAAGAGCTTTTGATTGAAGAATGCTGAGCTCGACTGATTGAATGTCCATGTCATGGATTTTACCAGGTTTTTAAATGAAGCTGTTCGGTCTCACAAGAGGCCTGAAGTGTTGTATGACTGTTTAAAGCAGAACGTTACCAACTCGCAGGGCATTTGTAATGCAGATGTAGGGTATATAAAAAAAAGACTTTAATACAATAAAGTGTTTGTTGCACTTTTGCTGACGTTCTAGTGAAGCAGGAGCTTTCGGGCTGCTGTTGAAATGTTTACCTCAGGTTCATGGGAACCAGATGTGGCAGCTATTTTTCATGTAGAAGACTTTGTTTTCGTTGTTTCAGTACCGATTTGTTCAAAGATGTGTAAACATGTGTCTGGATACAGTTATTGTTCTCTTGGATCAAATGGAAGAGGTGCTTTTAATTTCTTTCTCTTTTTCTTTTTTAAGCAATCATATGCATAGCCATGTATCTTATTTATTTGATATTCAAATGAAAT --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|50742653|gb|CF660613.2|CF660613 AGTCTGATTCTGACCATCACAGCAGCACAGACGACGCATCAGATGCAGGTTCCATATCCATCGCTGATCTTTCCGAATCAGACTTATTTTTTGACCCGACCGAAGAGGCCTTGTGTAAAGAAGTGGTGCAGCTCATCGCACTTAACCTGACCGACGCCAAAGACGGCGTCTTGCACTGTTCCAAGCTGCTGATTCCCGAGACGCTCCTGGAGCACATCGGCCAGGAGCTGGTGCATCTGTCGGTCAGCGAGCCCTGCGGCCTTCGCGGTGCCCTCGTTGACCTCTGCGTGGAGCAGGATGGCATCTGCGAAACCGTGGGACAAATCTCAGTCGACCCGTACCTGGTGCCCACCTTCCAGCTCACACTCGTGCTGAGGCTCGACTCCCAGGGCTTTTGGCCAAAAA*TCCAGGGGCTTTTCGCCGGCAGATCGCCTTCGTCTCCGGTTGTTAGACATGCACTTAAACTGAGCACTGGATTCAGAGTTATTAAGAGAAAACTGTACAGCTCTGAAGAGCTTTTGATTGAAGAATGCTGALLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL gi|50741145|gb|CF662254.2|CF662254 LTTTTTCGACCCGACCGAAGAGGCCTTGTGCAAAGAAGTGGTGCAGCTCATCGCACTTAACCTGACCGACGCCAAAGACGGCGTCTTGCACTGTTCCAAGCTGCTGATTCCCGAGACGCTCCTGGAGCACATCGGCCAGGAGCTGGTGCATCTGTCGGTCAGCGAGCCCTGCGGCCTTCGCGGTGCCCTCGTTGACCTCTGCGTGGAGCAGGATGGCAGCTGCGAAGCCGTGGGACAAATCTCAGTCGACCCGTACCTAGTGCCCACCTTCCAGCTCACACTCGTGCTGAGGCTCGACTCCAGGGGCTTTTGGCCAAAAA*TCCAGGGGCTTTTCGCCGGCAGATCGCCTTCGTCTCCGGTTGTTAGACGTACACTTAAACTGAGCACTGGATTCAGAGTTATTAAGAGAAAACTGTACAGCTCTGAAGAGCTTTTGATTGAAGAATGCTGAGCTCGACTGATTGAATGTCCATGTCATGGATTTTACCAGGTTTTTAAATGAAGCTGTTCGGTCTCACAAGAGGCCTGAAGTGTTGTATGACTGTTTAAAGCAGAACGTTACCAACTCGCAGGGCATTTGTAATGCAGATGTAGGGTATATAAAAAAA*GACTTTAATACAATAAAGTGTTTGTTGCACTTTTGCTGACGTTCTAGTGAAGCAGGAGCTTTCGGGCTGCTGTTGAAATGTTTACCTCAGGTTCATGGGAACCAGATGTGGCAGCTATTTTTCATGTAGAAGACTTTGTTTTTGTTGTTCAAGTACCGATTTGTTCAAAGATGTGTAAACATGTGTCTGGATACAGTTATTGTTCTCTTGGATCAAATGGAAGAGGTGCTTTTAATTTCTTTCTCTTTTTCTTTTTTAAGCAATCATATGCATAGCCATGTATCTTATTTATTTGATATTCAAATGAAAT gi|50737340|gb|CA964291.2|CA964291 ACTGTTCCAAGCTGCTGTCTCCCGAGACGCTCCTGGAGCACATCGGCCAGGAGCTGGTGCATCTGTCGGTCAGCGAGCCCTGCGGCCTTCGCGGTGCCCTCGTTGACCTCTGCGTGGAGCAGGATGGCAGCTGCGAAGCCGTGGGACAAATCTCAGTCGACCCGTACCTAGTGCCCACCTTCCAGCTCACACTCGTGCTGAGGCTCGACTCCAGGGGCTTTTGGCCAAAAAATCCAGGGGCTTTTCGCCGGCAGATCGCCTTCGTCTCCAGTTGTTAGACGTGCACTTAAACTGAGCACTGGATTCAGAGTTATTAAGAGAAAACTGTACAGCTCTGAAGAGCTTTTGATTGAAGAATGCTGAGCTCGACTGATTGAATGTCCATGTCATGGATTTTACCAGGTTTTTAAATGAAGCCGTTCGGTCTCACAAGAGGCCTGAAGTGTTGTATGACTGTTTAAAGCAGAACGTTACCAACTCGCAGGGCATTTGTAATGCAGATGTAGGGTTTATAAAAA***GACTTTAATACAATAAAGTGTTTGTTGCACTTTTGCTGACGTTCTAGTGAAGCAGGAGCTTTCGGGCTGCTGTTGAAAT gi|109278594|gb|EC391803.1|EC391803 LLLCAAACTCCTCATTCCCGAGACGCTCCTGGAGCACATCGGCCAGGAGCTGGTGCATCTGTCGGTCAGCGAGCCCTGCGGCCTTCGCGGTGCCCTCGTTGACCTCTGCGTGGAGCAGGACGGCAGCTGCGAAGCCGTGGGACAAATCTCAGTTGACCCATACCTAGTGCCCACCTTCCAGCTCACACTCGTCCTGAGGCTCGACTCCAGGGGCTTTTGGCCAAAAA*TCCAGGGGCTTTTCGCCGGCAGATCGCCTTCGTCTCCAGTTGTTAGACGTGCACTTAAACTGAGCACTGGATTTAGAGTTATTAAGAGAAAACTGTACAGCTCTGAAGAGCTTTTGATTGAAGAATGCTGAGCTCGACTGATTGAATGTCCATGTCATGGATTTTACCAGGTTTTTAAATGAAGCTGTTCGGTCTCACAAGAGGCCTGAAGTGTTGTATGACTGTTTAAAGCAGAACGTTACCAACTCGCAGGGCATTTGTAATGCAGATGTAGGGTATATAAAAAAAAGACTTTAATACAATAAAGTGTTTGTTGCACTTTTGCTGACGTTCTAGTGAAGCAGGAGCTTTCGGGCTGCTGTTGAAATGTTTACCTCAGGTTCATGGGAACCAGATGTGGCAGCTATTTTTCATGTAGAAGACTTTGTTTTCGTTGTTTCAGTACCGATTTGLL Putative SNPs: 444G>A 13. 100 200 300 400 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.. Cyprinus_Cluster7929.seq.Contig1 CAAGAATCTTGCTGTATTCCAAAATTAGTGAAAAATGACCAACCAGGCTCTTCATGTCAACACTGACAAGTGGATTGCTGAAAATGAGAATTCATTTCTACCACCTGTATGCAACAAATTAATGTTCTTTTATCAACTGAATATTATGTATGTTGGAGGTCCAAATGCAAGGAAGGATTATCACATTGAGGAAGGGGAAGAGCTCTTTTACCAGGTGAGGGGCGACATGGTTTTGAAAGTGATAGAGGACGGCAAGCATAAAGACATACATATTCGAGAAGGAGAGATGTTCCTGCTTCCAGCACGGATTCTCCACCCTCCTCAGAGATACGCAAACACAGTACGGCTGGTCCTGGAGAGGAAGAGGCTTCTCTCTGAAACAGATGGCCTCAGGTACTTTGTGGATAATAGTACAGATGTCTTGTTTGAACGTTGGTTCTACTGTGAGAACCTGGGAACCCA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ gi|50733177|gb|CA967344.2|CA967344 LLLGAATCTTGCTGTATTCCAAAATTAGTGAAAAATGACCAACCAGGCTCTTCATGTCAACACTGACAAGTGGATTGCTGAAAATGAGAATTCATTTCTACCACCTGTATGCAACAAATTAATGTTCTTTTATCAACTGAATATTATGTATGTTGGAGGTCCAAATGCAAGGAAGGATTATCACATTGAGGAAGGGGAAGAGCTCTTTTACCAGGTGAGGGGCGACATGGTTTTGAAAGTGATAGAGGACGGCAAGCATAAAGACATGCACATTCGAGAAGGAGAGATGTTCCTGCTTCCAGCACGGATTCCCCACTCTCCTCAGAGATACGCAAACACAGTAGGGCTGGTCGTGGAGAGGAAGAGGCTTCGCTCTGAGACAGATGGCCTCAGGTACTTTGTGGATAATAGTACAGATGTCTTGTTTGAACGTTGGTTCTACTGTGAGAACCTGGGAACCCA gi|50738762|gb|CA965393.2|CA965393 CAAGAATCTTGCTGTAGTCCGAAATTAGTGAAAAATGACCAACCAGGCTCTTCATGTCAACACTGACAAGTGGATTGCTGAAAATGAGAATTCATTTCTACCACCTGTATGCAACAAATTAATGTTCTTTTATCAACTGAATATTATGTATGTTGGAGGTCCAAATGCAAGGAAGGATTATCACATTGAGGAAGGGGAAGAGCTCTTTTACCAGGTGAGGGGCGACATGGTTTTGAAAGTGATAGAGGACGGCAAGCATAAAGACATACATATTCGAGAAGGAGAGATGTTCCTGCTTCCAGCACGGATTCTCCACCCTCCTCAGAGATACGCAAACACAGTACGGCTGGTCCTGGAGAGGAAGAGGCTTCTCTCTGAAACAGATGGCCTCAGGTACTTTGTGGATAATAGTACAGATGTCTTGTTTGAACGTTGGTTCTACTGT gi|50734722|gb|CA968547.2|CA968547 AGAATCTTGCTGTATTCCAAAATTATTGAAAAATGACCAACCAGGCTCTTCATGTCAACACTGACAAGTGGATTGCTGAAAATAAAAATTCGTTTCTGGCACCTGTATGCAACAAATTAATGTTCTTTTATCAACTGAATATTATGTATGTTGGAGGTCCAAATGCAAGGAAGGATTATCACATTGAGGAAGGGGAAAAGCTCTTTTACCACGTGAGGGGCGACATGGTTTTGTAAGTGATACAGGACGGCAAGCATAAAAACATACALLL gi|50734623|gb|CA968457.2|CA968457 GGATTGCTGAAAATAAGAATTCTTTTTTACCACCTGTATGCAACAAATTAATGTTCTTTTATCAACTGAATATAATATATG Putative SNPs: 86G>A 14. 100 200 300 400 500 600 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.... Cyprinus_Cluster7933.seq.Contig1 TAAAACTCCCTGCTGCACACTTTGTCTCTTACAGCCAGAAAACCTTGTGAAGCTGGTGGGAATGTCTGAGAGAGTTGTGCTGCATTACTTCAATGGCAGAGGAAAGATG*GAGGCGGTGCGCTGGCTGCTGGCTGCAGCTGGAGTCCAGTTTGAGGAAGTGTTTTTGACCAAAAGGGAGGAGTATGAAAAACTGCTGAATGATGGAGCCCTGATGTTTCAGCAGGTGCCTTTGGTGGAAATAGACGGGATGCAGCTCGTGCAGTCAAAGGCCATCTTGAACTACATCGCTGGAAAATACAGTCTTTACGGAAAAGATCTTAAAGAACGGGCTATGATCGACATGTATTCAGAGGGAGTCAGTGATCTCATGGATTTGGTTATAATGTATCCTTTGACACCACCTGAAAACAAACAGAAATACCTCAGTAATATAGAGCAAAAGGCCAAAGAT*CGCTTTCTTCCCGTGTTTGAAAAGGGTCTGGGGAACTCTCAGTTCCTTGTGGGAAACCAGTTGAGCCATGCTGACGTTCACCTTCTTGAAGTCACTCTGATGCTGCAGGAGTTACTCCCTACAATACTTTCACGCTTTCCCAAAATCCAGGCGTTTCAAGAGAAGATGAAGGCCTTACCAACGATCAGCAAGTTCCTCCAGCCGGGCAGCGCAAGAAAACCCCCACCCCAT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ gi|50742372|gb|CA966895.2|CA966895 TAAAACTCCCTGCTGCACACTTTGTCTCTTACAGCCAGAAAACCTTGTGAAGCTGGTGGGAATGTCTGAGAGAGTTGTGCTGCATTACTTCAATGGCAGAGGAAAGATG*GAGGCGGTGCGCTGGCTGCTGGCTGCAGCTGGAGTCCAGTTTGAGGAAGTGTTTTTGACCAAAAGGGAGGAGTATGAAAAACTGCTGAATGATGGAGCCCTGATGTTTCAGCAGGTGCCTTTGGTGGAAATAGACGGGATGCAGCTCGTGCAGTCAAAGGCCATCTTGAACTACATCGCTGGAAAATACAGTCTTTACGGAAAAGATCTTAAAGAACGGGCTATGATCGACATGTATTCAGAGGGAGTCAGTGATCTCATGGATTTGGTTATAATGTATCCTTTGACACCACCTGAAAACAAACAGAAATACCTCAGTAATATAGAGCAAAAGGCCAAAGAT*CGCTTTCTTCCCGTGTTTGAAAAGGGTCTGGGGAACTCTCAGTTCCTTGTGGGAAACCAGTTGAGCCATGCTGACGTTCACCTTCTTGAAGTCACTCTGATGCTGCAGGAGTTACTCCCTACAATACTTTCACGCTTTCCCAAAATCCAGGCGTTTCAAGAGAAGATGAAGGCCTTACCAACGATCAGCAAGTTCCTCCAGCCGGGCAGCGCAAGAAAACCCCCACCCCAT gi|50733186|gb|CA967353.2|CA967353 LLLLACAGCCAGAAAACCTTGTGAAGCTGGTGGGAATGTCTGAGAGAGTTGTGCTGCATTACTTCAATGGCAGAGGAAAGATG*GAGGCGGTGCGCTGGCTGCTGGCTGCAGCTGGAGTCCAGTTTGAGGAAGTGTTTTTGACCAAAAGGGAGGAGTATGAAAAACTGCTGAATGATGGAGCCCTGATGTTTCAGCAGATGCCTTTGGTTGAAATAGACGGGATGCAGCTCGTGCAGTCAAAGGCCATCTTGAACTACATCGCTGGAAAATACAGTCTTTACGGAAAAGACCTTAAAGAACGGGCTATGATCGACATGTATTCAGAGGGAGTCAGTGATCTCATGGATTTGGTTATAATGTATCCTTTGACACCACCTGAAAACAAACAGAAATACCTCAGTAATATAGAGCAAAAGGCCAAAGAT*CGCTTTCTTCCCGTGTTTGAAAAGGGTCTGGGGAACTCTCAGTTCCTTGTGGGAAACCAGTTGAGCCGTGCTGACGTTCACCTTCTTGAAGTCACTCTGATGCTGCAGGAGTTACTCCCTACAATACTTTCACGCTTTCCCAAAATCCAGGCGTTTC gi|50744213|gb|CF661931.2|CF661931 LLLLLLLLLLLLLLLLLLLATGTCTGACAAAGTTGTGTTGCATTACTTCAATGGAAGAGGAAAGATG*GAGTCGATCCGATGGCTGCTGGCTGCAGCTGGAGTCCAGTTCGAGGAAGTGTTTTTGACCAAAAGGGAGCAGTATGAAAAACTGCTCAGTGATGGAGCCCTGATGTTTCAGCAGGTGCCTTTGGTGGAAATAGACGGGATGCAGCTCGTGCAGTCAAAGGCCATCTTGAATTACATTGCTGGAAAATACAATCTATATGGAAAAGACCTTAAAGAACGGGCTATGATCGACATGTATTCAGAGGGTGCCAGTGATCTAACGGATTTGATTATTATGTATCCTTTCAAACCAGCTGAACACAAACAGACACACCTCAGTACTATAGAGCAAAAGGCCAAAGATTCGCTTTCTTCCTGTGTTTGAAAAGGGTTTTGCAGACTCTCATTTCCTGGTGGGAAACCAGCTGAACCGAGCCGACGTTCACCTTCTTGAAGTCACTCTGATGCTGCAGGAATTGCTCCCTACCATACTTTCAACCTTTCCCAAAATCCAGGCGTTTCA gi|89500060|gb|DY655856.1|DY655856 CAGAAGAAAGATGTGAGGCGGTGCGCTGGCTGCTGGCTGCAGCTGGAGTCCAGTTTGAGGAAGTGTTTTTGACCAAAAGGGAGGAGTATGAAAAACTGCTGAATGATGGAGCCCTGATGTTTCAGCAGGTGCCTTTGGTGGAAATAGACGGGATGCAGCTCGTGCAGTCAAAGGCCATCTTGAACTACATCGCTGGAAAATACAGTCTTTACGGAAAAGATCTTAAAGAACGGGCTATGATCGACATGTATTCAGAGGGAGTCAGTGATCTCATGGATTTGGTTATAATGTATCCTTTGACACCACCTGAAA Putative SNPs: 317T>C 15. 100 200 300 400 500 600 700 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.... Cyprinus_Cluster7943.seq.Contig1 CGGGCCAGCAATGTAGCGCAGGGGAAGAGTCGTCGTCAAACTACTATGTTTGAGTGCAGCACACGCTTTATCAGTACTAACAAGTACATCTTATTGAACATAATTTGAATGCCTTCGGCAGAATTCAAATGAGCCATTTTAATCTAGATTAATCTAGATTAATTCCAAGATTACAGTGAGATTAATCTAGATTAAAAAAAATAATCTATGCCCACCACTAAAAAAAATACATTTAAATTTATAATAATAACCATAAAAATATAGTAAAACTATATTACATAATTGTAATCTAAAATTATATATATATTAGTGGTGGGCCGTTATCGGCGTTAACGTGCTGCGTTAACGTGAGACTCTTATCGGGCGATAAAAAAAATATCACCGTTAATCTATTCTCAAAGTTGGGTTGGGAGCTGGGTCTATACTACGCAAGCTATGATGACTTTCGCCGTGATAGTTTAGCGCGGATGTATACCTAGACTAATTGCACTGT*AGGGGGCGAGAACGAGTCTTCGAACCTGTGTGTATTAGTGATGCGCGGGTCGACTCATAACCCGCGGACCCCGCGGGGTTGGGGCGGGTAAAGAAATTGTCACTTTATTTGCGGGGCGGGTTGGGGTGGGTAATAAAAAAAACAAAAAAAACATACGTTGTAGTGTTGGGCGATATGGTCATTTTTTCAAATCAGATCAGATCGACGATACACAATATTA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ gi|50743531|gb|CF661310.2|CF661310 CGGGCCAGCAATGTAGCGCAGGGGAAGAGTCGTCGTCAAACTACTATGTTTGAGTGCAGCACANGCTTTATCAGTACTAACAAGTACATCTTATTGAACATAATTTGAATGCCTTCGGCAGAATTCAAATGAGCCATTTTAATCTAGATTAATCTAGATTAATTCCAAGATTACAGTGAGATTAATCTAGATTAAAAAAAATAATCTATGCCCACCACTAAAAAAAATACATTTAAATTTATAATAATAACCATAAAAATATAGTAAAACTATATTACATAATTGTAATCTAAAATTATATATATATTAGTGGTGGGCCGTTATCGGCGTTAACGTGCTGCGTTAACGTGAGACTCTTATCGGGCGATAAAAAAAATATCACCGTTAATCTATTCTCAAAGTTGGGTTGGGAGCTGGGTCTATACTACGCAAGCTATGATGACTTTCGCCGTGATAGTTTAGCGCGGATGTATACCTAGACTAATTGCACTGT*AGGGGGCGAGAACGAGTCTTCGAACCTGTGTGTATTAGTGATGCGCGGGTCGACTCATAACCCGCGGACCCCGCGGGGTTGGGGCGGGTAAAGAAATTGTCACTTTATTTGCGGGGCGGGTTGGGGTGGGTAAT gi|50743476|gb|CF661259.2|CF661259 CGGGCCAGCAATGTAGCGCAGGGGAAGAGTCGTCGTCAA*CTACT**GTTTGAGTGCAGCACA*GCTTTATCAGTACTAACAAGTACATCTTATTGAACATAATTTGAATGCCTTCGGCAGAATTCAAATGAGCCATTTTAATCTAGATTAATCTAGATTAATTCCAAGATTACAGTGAGATTCATCTAGATTAAAAAAAATAATCTATGCCCACCACTAAAAAAAATACATTTAAATTTATAATAATAACTATAAAAATATAGTAAAACTATATTACATAATTGTAATGTGAAATT*TATATATATTAGTGGTGGGCCGTTATCGGCGTTAACGTGCTGCGTTAACGTGAGACTCTTATCGGGCGATAAAAAAAATATCACCGTTAATCTATTCTCAAAGTTGGGTTGGGAGCTGGGTCTATACTACGCAAGCTTTGATGACTTTCGCCGTGATAGTTTAGCGCGGATGTATACCTAGACTAATTGCACTGT*AGGGGGCGAGAACGAGTCTTCGAACCTGTGTGTATTAGTGATGCGCGGGTCGTCTCATAACCCGCGGACACCGCGGGGTTGGGGCGGGTAAAGAAATTGTCACTTTATTTGCGGGGCGGGTTGGGGTGGGTAATAAAAAAAACAAAAAAAACATACGTTGTAGTGTTGGGCGATATGGTCATTTTTTCAAATCAGATCAGATCGACGATACACAATATTA gi|50743532|gb|CF661311.2|CF661311 CGCAGGGGAAGAGTCGTCGTCAAACTACTATGTTTGAGTGCAGCACACGCTTTATCAGTACTAACAAGTACATCTTATTGAACATAATTTGAATGCCTTCGGCAGAATTCAAATGAGCCATTTTAATCTAGATTAATCTAGATTAATTCCAAGATTACAGTGAGATTAATCTAGATTAAAAAAAATAATCTATGCCCACCACTAAAAAAAATACATTTAAATTTATAATAATAACCATAAAAATATAGTAAAACTATATTACATAATTGTAATCTAAAATTATATATATATTAGTGGTGGGCCGTTATCGGCGTTAACGTGCTGCGTTAACGTGAGACTCTTATCGGGCGATAAAAAAAATATCACCGTTAATCTATTCTCAAAGTTGGGTTGGGAGCTGGGTCTATACTACGCAAGCTATGATGACTTTCGCCGTGATAGTTTAGCGCGGATGTATACCTAGACTAATTGCACTGT*AGGGGGCGAGAACGAGTCTTCGAACCTGTGTGTATTAGTGATGCGCGGGTCGACTCATAACCCGCGGACCCCGCGGGGTTGGGGCGGGTAAAGAAATTGTCACTTTATTTGCGGGGCGGGTTGGGGTGGGTAAT gi|50743439|gb|CF661223.2|CF661223 ATATTACATAATTGTAATGTGAAATT*TATATATATTAGTGGTGGGCCGTTATCGGCGTTAACGTGCTGCGTTAACGTGAGACTCTTATCGGGCGATAAAAAAAATATCGCCGTTAATCTATTCTCAAAGATGGGATGGGAGCTGGGACTATACTACGCAAGCCTTGATGACTTTCGCCGTGATAGTTTAGCGCGGATGTACACCTGGACTAATTGCACTGTCAGGGGGCCAGAACTAGTCTTCTAACCTGCGTGTATTAGTGATGCGCGGGTCTTCTCATAACCCCCGGAC Putative SNPs: 290C>G, 292A>G, 436A>T, 547A>T 16. 100 200 300 400 500 600 700 800 900 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+. Cyprinus_Cluster7944.seq.Contig1 TCCGGGGACAAAATGCGTGAATGTATTTCCATGCACGTTGGCCAAGCCGGAGCCCAGATGGGCAATGCATGCTGGGAGTTGTATTGCCTGGAGCATGGGATCCAGCCAGATGGTCAGATGCTCAGTGACAAAACCATTGGAGGTGGAGATGACTCCTTCAACACCTTCTTCAGTGAGACTGGAGCTGGAAAACATGTCCCAAGAGCAGTCTTTGTTGATCTGGAGC*CCACTGTCATTGATGAGGTGCGCACAGGTACCTACCGCCAGCTGTTCCACCCTGAGCAGTTGATCACTGGTAAGGAAGATGCTGCCAACAACTACGCCCGTGGGCACTACACCATTGGCAAGGAGATCATTGACCTGGTGCTGGACAGGACTCGCAAACTGGCTGATCAGTGCACTGGGCTCCAGGGCTTCCTGATCTTCCACAGTTTTGGTGGTGACACTGGCTCTGGGTTCACCTCTCTCCTAATGGAACGGCTCTCTGTCGACTACGGGAAGAAGTCAAAACTT*GAGTTCGCTG*TCTATCCAGCTCCTCAAGTGTCCACTGCAGT*GGTGG*AGCCCTACAACTCCATTCTTACCACCCACACCACCCTCGAGCACTCCGACTGTGCCTTCATGGTAGACAATGAGGCCATCTACGATATCTGCCGTAGAAACCTCGACATCGAGCGTCCCACCTACACAAACCCCAACAGGCTGATCGGGCAGATTGTTTCCTCCATCACAGCATCCCTGCGTTTCGATGGAGCCCTGAATGTAGATCTGACCGAGTTCCAAACCAACTTGGTCCCCTATCCACGTATCCACTTCCCTCTGGCCACCTACGCCCCAGTGATCTCCGCAGAGAAGGCCTACCATGAGCAGCTGTCCGTAGCTGACATCACCAACGCTTGCTTCGAGCCAGCCAATCAGATGGTGAAATGTGACCCTCGTCACGGCAAGT --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|50734161|gb|CA968032.2|CA968032 TCCGGGGACAAAATGCGTGAATGTATTTCCATGCACGTTGGCCAAGCCGGAGCCCAGATGGGCAATGCATGCTGGGAGTTGTATTGCCTGGAGCATGGGATCCAGCCAGATGGTCAGATGCTCAGTGACAAAACCATTGGAGGTGGAGATGACTCCTTCAACACCTTCTTCAGTGAGACTGGAGCTGGAAAACATGTTCCAAGAGCAGTCTTTGTTGATCTGGAGC*CCACTGTCATTGACGAGGTGCGCACAGGTACCTACCGCCAGCTGTTCCACCCTGAGCAGTTGATCACTGGTAAGGAAGATGCTGCCAACAACTACGCTCGTGGGCACTACACCATTGGGAAGGAGATCATTGACCTGGTGCTGGACAGGACTCGCAAACTGGCTGATCAGTGCACTGGGCTCCAGGGCTTCCTGATCTTTCACAGTTTTGGTGGTGGCACTGGCTCTGGGTTCACCTCTCTCCTAATGGAACGGCTCTCTGTTGACTACGGAAAGAAGTCTAAACTT*GAGTTTGCGG*TCTATCCAGCTCCTCAAGTGTCCACTGCAGT*GGTGG*AGCCCTACAACTCCATTCTTACCACCCACACCACCCTCGAGCACTCCGACTGTGCCTTCATGGTAGACAATG gi|22022021|gb|AU279289.1|AU279289 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLGATGACTCCTTCAACACCTTCTTCAGTGAGACTGGTGCTGGAAAACATGTCCCAAGAGCAGTCTTTGTTGACCTGGAGC*CCACTGTCATTATTGAGGTGCGCACAGGTACCTACCGCCAGCTGTTCCACCCTGAGCAGTTGATCACTGGTAAGGAAGATGCTGCCAACAACTACGCCCGTGGGCACTACACCATTGGCAAGGAGATCATTGACCTGGTGCTGGACAGGACTCGCAAACTGGCTGATCAGTGCACTGGGCTCCAGGGCTTCCTGATGTTCCACAGTTTTGGTGGTGGTACCGGCTCTGGGTTCACCTCTCTCCTAATGGAACGGCTCTCTGTCGACTACGGGAAGAAGTCAAAACTT*GAGTT*GCTG*TCTATCCAGCTCCTCAAGTATCCACTGCAGTTGGTGGGAGCCCT*CAACT gi|50736583|gb|CA970089.2|CA970089 LLLLLLLLLLLTGTCCCAAGAGCAGTCTTTGTCGATCTGGAGCTCCACTGTCATTGATGAGGTGCGCACAGGTACCTACCGCCAGCTGTTCCACCCTGAGCAGTTGATCACTGGTAAGGAAGACGCTGCCAACAACTACGCCCGTGGGCACTACACCATTGGCAAGGAGATCATTGACCTGGTGCTGGACAGGACTCGCAAACTGGCTGATCAGTGCACTGGGCTCCAGGGCTTCCTGATCTTCCACAGTTTTGGTGGTGACACTGGCTCTGGGTTCACCTCTCTCCTAATGGAACGGCTCTCTGTCGACTACGGGAAGAAGTCAAAACTT*GAGTTCGCTG*TCTATCCAGCTCCTCAAGTGTCCACTGCAGT*GGTGG*AGCCCTACAACTCCATCCTTACCACCCACACCACCCTCGAGCACTCCGACTGTGCCTTCATGGTGGACAACGAGGCCATCTACGATATCTGCCGTAGAAACCTCGACATCGAGCGCCCCACCTACACAAACCTCAACAGGTTGATCGGGCAGATCGTTTCCTCCATCACAGCATCCCTGCGTTTCGATGGAGCTCTGAATG gi|4527040|gb|AU052105.1|AU052105 CTAATGGACGGGCTCTCTGTTGACTACGGAAAGAAGTCTAAACTTTGAGTTTNCGGGTCTATCCAGCTCNTCAAGTGTCCACTGCAGT*GGTGG*AGCCCTACAACTCCATTCTTACCNCCCNCACCACCCTCGAGCACTCCGACTGTGCCTTCATGGTAGACAATGAGGCCATCTACGATATCTGCCGTAGAAACCTCGACATCGAGCGTCCCACCTACACAAACCCCAACAGGCTGATCGGGCAGATTGTTTCCTCCATCACAGCATCCCTGCGTTTCGATGGAGCCCTGAATGTAGATCTGACCGAGTTCCAAACCAACTTGGTCCCCTATCCACGTATCCACTTCCCTCTGGCCACCTACGCCCCAGTGATCTCCGCAGAGAAGGCCTACCATGAGCAGCTGTCCGTAGCTGACATCACCAACGCTTGCTTCGAGCCAGCCAATCAGATGGTGAAATGTGACCCTCGTCACGGCAAGT Putative SNPs: 490T>C, 499A>G, 508T>A, 524G>T 17. 100 200 300 400 500 600 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+..... Cyprinus_Cluster7947.seq.Contig1 TGGGCTGAAGTCACGACTTGAGTACATTGTCTTGTTTTGTTTGTACCCTGCAGTTTTGAGTCATCATGGACTTTTTTAAAGGCCTTCAGACGATACTTACCATGTATTTTTTAGCATGCGCTTATGGAGACATCATGAAAATAGACACCACCGGTGCTTCAGAGGCAACAGCAAAACAAGACAAATTAACCATTAAGGGGGTTGAAGCCTCTAAAAAACTGGCTGAGCATGATCTGGCCCGGGTGGAGAAATACAAGAACATGATCACTAAAGTTGGCAAAGCAAAAAAGATGGATCCGGCTGTGATTGCTGCTATGATATCCAGAGAGTCCAGAGCTGGAGCCGTCCTGAAGAATGGATGGGAACCCGCA*GGCAATGGCTTTGGCCTTATGCAGGTTGACAAACGCTACCACACTCCGGGTGGTGCATGGGACAGTGAGCAGCATGTCACACAAGCTACAGAGATACTCATTGGCTTCATTAAAGAAATTAAAGTAAATTTTCCCAAGTGGACACAAGAGCAATGCTTTAAAGGGGGAATAGCAGCCTATAACAAAGGTGTGAGTAGAGTCACTTCGTATGAGAATATCGATGTCAAAACCACAGGACTAGATTACTCCAGTGATGTTGTTGC ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|50736376|gb|CA969926.2|CA969926 TGGGCTGAAGTCACGACTTGAGTACATTGTCTTGTTTTGTTTGTACCCTGCAGTTTTGAGTCATCATGGACTTTTTTAAAGGCCTTCAGACGATACTTACCATGTATTTTTTAGCATGCGCTTATGGAGACATCATGAAAATAGACACCACCGGTGCATCAGAGGTGACAGCAAAACAGGACAAATTAACCGTAAAGGGTGTCGAGGCTTCCAATAAACTGGCTGAGCATGATCTGGCCCGAATGGAGCAGTATAAGAGTAAGATCATCAAAGTTGGCAGAGCAAAGCAGATGGACCCGGCTGTGATTGCTGCCATCATATCCAGAGAGTCCAGAGCCGGAGCTGCTCTAAAGGATGGATGGGGCGAC*CATGGCAATGGCTTTGGCCTCATGCAGGTTGACAAACGCTACCACAAGCTGGAAGGGACATGGGACAGTGAGGAACATCTCACACAAGGGACTGAGATACTCATTGGCTCTATAAATGGCATCAGAGCAAAGTTTCCCCAGTGGACAAAAGAGCAATGGTTTAAAGGGGGAATATCAGCCTACAAC gi|50736374|gb|CA969924.2|CA969924 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLTTATGGAGACATCGTGAAAATAGACACCACCGGTGCTTCAGAGGCAACAGCAAAACAAGACAAATTAACCATTAAGGGGGTGGAAGCCTCTAAAAAACTGGCTGAGCATGATCTGGCCCGGGTGGAGAAATACAAGAACATGATCACTAAAGTTGGCAAAGCAAAGAAGATGGATCCGGCTGTGATTGCTGCTATGATATCCAGAGAGTCCAGAGCTGGAGCCGTCCTGAAGAATGGATGGGAACCCGCA*GGCAATGGTTTTGGCCTTATGCAGGTTGACAAACGCTACCACAGTCCGGTTGGTGCATGGGACAGTGAGCAGCATGTCACACAAGCTACAGAGATACTCATTGGCTTCATTAAAGAAATTAAAGTAAATTTTCCCAAGTGGACACAAGAGCAATGCTTTAAAGGGGGAA gi|50739033|gb|CA965584.2|CA965584 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLTTATGGAGACATCATGAAAATAGACACCACCGGTGCTTCAGAGGCAACAGCAAAACAAGACAAATTAACCATTAAGGGGGTTGAAGCCTCTAAAAAACTGGCTGAGCATGATCTGGCCCGGGTGGAGAAATACAAGAACATGATCACTAAAGTTGGCAAAGCAAAAAAGATGGATCCGGCTGTGATTGCTGCTATGATATCCAGAGAGTCCAGAGCTGGAGCCGTCCTGAAGAATGGATGGGAACCCGCA*GGCAATGGCTTTGGCCTTATG gi|50738857|gb|CA965489.2|CA965489 LLLLLLLLLLLLLLLLLLLLLLLLLLTTATGGAGACATCATGAAAATAGACACCACCGGTGCTTCAGAGGCAACAGCAAAACAAGACAAGTTAACCATTAAGGGGGTTGAAGCCTCTAAAAAACTGGCTGAGCATGGTCTGGCCCGGGTGGAGAAATACAAGAACATGATCACTAAAGTTGGCAAAGCAAAAAAGATGGATCCGGCTGTGATTGCTGCTATGATATCCAGAGAGTCCAGAGCTGGAGCCGTCCTGAAGAATGGATGGGAACCCGCA*GGCAATGGTTTTGGCCTTATGCAGGTTGACAAACGCTACCACACTCCGGGTGGTGCATGGGACAGTGAGCAGCATGTCACACAAGCTACAGAGATACTCATTGGCTTCATTAAAGAAATTAAAGTAAATTTTCCCAAGTGGACACAAGAGCAATGCTTTAAAGGGGGAATAGCAGCCTATAACAAAGGTGTGAGTAGAGTCACTTCGTATGAGAATATCGATGTCAAAACCACAGGACTAGATTACTCCAGTGATGTTGTTGC Putative SNPs: 287G>A, 381C>T 18. 100 200 300 400 500 600 700 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+..... Cyprinus_Cluster7953.seq.Contig1 GGGAGTCCAGCTTGAGGAAAGAGACTGCAGCTGCCTGGACAGGGCCTAAATTCATCTGTTGGCTCAACTTGAAAAGGAATCATGGAAAGGAACATCATATATTTGTGGATTTGTGCTTTTGCAGTAGTTCATGGAAATCAAGAGACTTCACCACAACCTCCCATCAGTGATAAACTCCCATCATTGATAAAGATGAACAATGATTTTGCTTTTCACCTGTACAAGAGGCTTGTAGAAATGCCAGAGTATCAGTCCAAGAACATCTTCTTCTCTCCCTTCAGTGTGTCCATGGCCCTTTCTGAGCTGTCTTTAGGAGCCGGTGGTGAAACCAAAGAGCAGCTTCTCAGTGGCATCGGCCATAACAGCTCGGTCTTCAGCACTGAAGAAATGCACCAGATGTTCCACAGTCTCCTGGAAGAAATCGACCAGAGGACAGGGGTGGACATTAATGTCGGCAGTGCTCTATATGCAAGTGACAAATTAAAGCTCCTTCCTGAGTTCTTAAAGGAGATAAAGGAGTTTTACCACTCTGACGGCTTCACTGTGGATTTCAGCGTCAAAGAAACACTGGATAAAATCAACACGTATGTGAAGGAAAAAACACATGGGAAAATAGACCAAGCTGTTGATGATCTGGAATCTGACACTCTGATGTTTCTTCTCACTTACATATATTTTAAAGGAAAATGGGACATGCCATTTAACCCAAGCAAGACCAGTCAAAG ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|50733174|gb|CA967341.2|CA967341 GGGAGTCCAGCTTGAGGAAAGAGACTGCAGCTGCCTGGACAGGGCCTAAATTCATCTGTTGGCTCAACTTGAAAAGGAATCATGGAAAGGAACATCATATATTTGTGGATTTGTGCTTTTGCAGTAGTTCATGGAAATCAAGAGACTTCACCACAACCTCCCACCAGTGATAAACTCCCATCATTGATAAAGATGAACAATGATTTTGCTTTTCACCTGTACAAGAGGCTTGTAGAAATGCCAGAGTATCAGTCCAAGAACATCTTCTTCTCTCCCTTCAGTGTGTCCATGGCCCTTTCTGAGCTGTCTTTAGGAGCTGGTGGTGAAACCAAAGAGCAGCTTCTCAGTGGCATCGGCCATAACAGCTCGGTCTTCAGCACTGAAGAAATGCACCAGATGTTCCACAGTCTCCTGGAAGAAATCGACCAGAGGACAGGGGTGGACATTAATGTCGGCAGTGCTCTATATGCAAGTGACAAATTAAAGCTCCTTCCTGAGTTCTTGAAGGAGATAAAGGAGTTTTACCACTCTGACGGCTTCACTGTGGATTTCAGCGTCAAAGAAACACTGGATAAAATCAACACGTATGTGAAGGAAAAAACACATGGGAAAATAGACCAAGCTGTTGATGATCTGGAATCTGACACGCTGATGTTTCTTCTCACTTACATATATTTTAAAGGAAAATGGGACATGCCATTTAACCCAAGCAAGACCAGTCAAAG gi|50733222|gb|CA967389.2|CA967389 GCTTGAGGAAAGAGACTGCAGCTGCCTGGACAGGGCCTAAATTCATCTGTTGGCTCATCTTGAAAAGGAATCATGGAAAGGAACATCATATATTTGTGGATTTGTGCTTTTGCAGTAGTTCATGGAAATCAAGAGACTTCACCACAACCTCCCATCAGTGATAAACTCCCATCATTGGTAAAGATGAACAATGATTTTGCTTTTCACCTGTACAAGAGGCTTGTAGAAATGCCAGAGTATCAGTCCAAGAACATCTTCTTCTCTCCATTCAGTGTGTCCATGGCCCTTTCTGAGCTGTGTTTAGGAGCCGGTGGTGAAACCAAAGAGCAGCTTCTCAGTGGCATCGGCCATAACAGCTCGGTCTTCAGCACTGAAGAAATGCACCAGATGTTCCACAGTTTCCTGGAAGAAATCGACCAGAGGACAGGGGTGGACATTGATGTCGGCAGTGCTLL gi|50733834|gb|CA967789.2|CA967789 LLLLLLLLLLLLLLLCAGCTGC*TGGACAGG*CCTAAAT*CATCT*TTGGCTCAACTTGAAAAGGAATCATGCAAAGGAACATCATAT*TGTGTGGATTTGTGCTTTTGCAGTAGTTCATGGGAATCAAGAGACTTTACCACAACCTCCCATCAGCGATAAACTCCCGTCATTGATAAAGATGAACAATGATTTTGCTTTTCACCTGTACAAGAGGCTTGTAGAAATGCCCGACTATCAGTCCAAGAATATCTTCTTCTCTCCCCTCAGTGTGTCCATGGCCCTTTCTGAGCTGTGTTTAGGAGCCGGTGGTGAAACTAAAGAGCAGCTTCTCAGTGGCATCGGCCAGAACAGCTCGATCTTCAGCACTGAAGAAATGCACCAGATGTTCCACAGTCTCCTAGAGGAAATCGACAAGAGGACAGGGGTGGACATCAATGTCGGCAGTGCTCTATATGTAAGTGACCAATLLLLLLLLL gi|50738771|gb|CA965402.2|CA965402 CAGGGCCTAAATTCATCTGTTGGCTCAACTTGAAAAGGAATCATGGAAAGGAACATCATATATTTGTGGATTTGTGCTTTTGCAGTAGTTCATGGAAATCAAGAGACTTCACCACAACCGGCCATCAGTGATAAACTCCCATCATTGATAAAGATGAACAATGATTTTGCTTTTCACCTGTACAAGAGGCTTGTAGAAATGCCAGAGTATCAGTCCAAGAACATCTTCTTCTCTCCCTTCAGTGTGTCCATGGCCCTTTCTGAGCTGTCTTTAGGAGCCGGTGGTGAAACCAAAGAGCAGCTTCTCAGTGGCATCGGCCATAACAGCTCGGTCTTCAGCACTGAAGAAATGCACCAGATGTTCCACAGTCTCCTGGAAGAAATCGACCAGAGGACAGGGGTGGACATTAATGTCGGCAGTGCTCTATATGCAAGTGACAAATTAAAGCTCCTTCCTGAGTTCTTAAAGGAGATAAAGGAGTTTTACCACTCTGACGGCTTCACTGTGGATTTCAGCGTCAAAGAAACACTGGATAAAATCAACACGTATGTGAAGGAAAAAACACATGGGAAAATAGACCAAGCTGTTGATGATCTGGAATCTGACACTCTGATGTTTCTTCTCACTTACATATATTTTAA Putative SNPs: 308C>G 19. 100 200 300 400 500 600 700 800 900 1000 1100 1200 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.... Cyprinus_Cluster7955.seq.Contig1 CCCGCGGGGGAAATCAGGGAGCGAGAAGAG**CCGTCGGAGTGAATTCGTGTCGACTGTCCAGAGTCCGCGAATTCAAGTCCGTCCACCTGGTGAACATCCGAGAGCGAACATCCTTAACGAGCATTTCCACCAGAAGCGGAGGATCAGTTCAGGCAGAGGTGCAGCTTATTTGAAGACAATGTCCCTGCACCAGTTTTTGTTGGAACCAATCACATGCCATGCATGGAACCGGGACAGGACCCAAATTGCTATCAGTCCAAACAATCATGAAGTCCATATATACAAGAAAAGTGGGAATCAGTGGGTGAAAGTTCACGAATTAAAAGAACACAACGGGCACATCACCGGCATTGATTGGGCTCCTAAAAGTGATCGTATTGTGACCTGTGGAGCTGACCGTAATGCTTATGTATGGAGTCAAAAGGACGGCGTGTGGAAACCCACCCTTGTTATTCTCAGGATCAACCGTGCTGCCACGTTTGTGAAATGGTCTCCGCTGGAGAACAAGTTTGCAGTGGGGAGTGGAGCGCGACTCATATCCGTTTGCTACTTTGAGTCTGAAAATGATTGGTGGGTTAGTAAACACATCAAGAAGCCCATCCGTTCAACTGTCCTCAGTTTAGACTGGCATCCAAATAATGTGCTTCTGGCAGCTGGGTCATGTGACTTCAAATGCAGGGTATTCTCTGCGTACATCAAGGAGGTGGATGAGAAACCAGCCCCAACCCCGTGGGGGTCCAAGATGCCCTTTGGGCAGGTGATGTCAGAGTTTGGCGGGGCAGGAAGTGGAGGATGGGTTCACAGCGTCTGTTTCTCAGCCAGTGGGAACAGACTGGCTTGGGTCAGCCATGACAGCACTGTCACTGTAGTGGACCCCACAGTAAGCTCAACGCCAAGCCAGTTAAAGACCGAATTCCTTGCTCTCCTAAGTGTGACTTTTGTTTCTGAGAACAACATTGTGGCAGCAGGTCACGATTGCTGCCCTATGCTGTTCAGTTTTGATGATGGTGGAAACTTGACCTTCATATCCAAGCTGGACATTCCCAAGCAGAGCATCCAGCGCAACATTTCTGCCATGGAGCGCTTCCGCAACATGGACAAGAGGGCCACCACTGAGGACCGCAATAGCACCCTAGAAACCCTGCATCAGAACAGCATCACCCAAGTGTCTATATACGAAGGAGACAAAAGAGATTGTCGCAAATTCTGCACTACAGGAATTGACGGAGCAATGACCATATGGGATTTCAAGACCTTAGAGT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|109283764|gb|EC394474.1|EC394474 CCCGCGGGGGAAATCAGGGAGCGAGAAGAG**CCGTCGGAGTGAATTCGTGTCGACTGTCCAGAGTCCGCGAATTCAAGTCCGTCCACCTGGTGAACATCCGAGAGCGAACATCCTTAACGAGCATTTCCACCAGAAGCGGAGGATCAGTTCAGGCAGAGGTGCAGCTTATTTGAAGACAATGTCCCTGCACCAGTTTTTGTTGGAACCAATCACATGCCATGCATGGAACCGGGACAGGACCCAAACTGCTATCAGTCCAAACAATCATGAAGTCCATATATACAAGAAAAGTGGGAATCAGTGGGTGAAAGTTCACGAATTAAAAGAACACAACGGGCACATCACCGGCATTGATTGGGCTCCTAAAAGTGATCGTATTGTGACCTGTGGAGCTGACCGTAATGCTTATGTATGGAGTCAAAAGGACGGCGTGTGGAAACCCACCCTTGTTATTCTCAGGATCAACCGTGCTGCCACGTTTGTGAAATGGTCTCCGCTGGAGAACAAGTTTGCAGTGGGGAGTGGAGCGCGACTCATATCCGTTTGCTACTTTGAGTCTGAAAATGATTGGTGGGTTAGTAAACACATCAAGAAGCCCATCCGTTCAACTGTCCTCAGTTTAGACTGGCATCCAAATAATGTGCTTCTGGCAGCTGGGTCATGTGA gi|109282383|gb|EC393767.1|EC393767 LLLLLLLLLATCAGGGAGCGAGAAGAGAGCAGCCGGAGTGAATTCGTGTCGACTGTCCAGAGTCCGCGAATTCAAGTCCGTCCACCAAGTGAACACCCGAGAGACAACATCCTCG*CGAGCATTTCCTCAAGAAGCGGAGCATCGGTTCAGGCAGAGGTGCACGTTATTTGAAGACGATGTCGCTGCACCAGTTTTTGTTGGAACCCATCACGTGCCATGCGTGGAACCGGGACAGGACCCAAATTGCTATCAGTCCAAACAACCGTGAAGTCCACATATACAAGAAAAGTGGAAATCGGTGGGTGAAGGCTCACGAATTAAAAGAACACAATGGGCACATCACAGGCATTGATTGGGCTCCTAAAAGTGATCGTATTGTGACCTGTGGAGCTGACCGTAATGCTTATGTATGGAGTCAAAAGGACGGCATGTGGAAACCCACCCTTGTTATTCTCAGGATCAACCGTGCTGCCACGTTTGTGAAATGGTCCCCGCTTGAGAACAAGTTTGCTGTTGGTAGTGGAGCGCGACTCATATCCGTTTGCTACTTTGAGTCTGAAAATGATTGGTGGGTTAGTAAACACATCAAGAAGCCCATCCGTTCAACTGTCCTCAGTTTAGACTGGCATCCAAATAATGTGCTTCTGGCAGCTGGGTCATGTGACTTCAAATGTAGGG gi|109279931|gb|EC392501.1|EC392501 GGGGGAAATCAGGGAGCGAGAAGAG**CCGTCGGAGTGAATTCGTGTCGACTGTCCAGAGTCCGCGAATTCAAGTCCGTCCACCTGGTGAACATCCGAGAGCGAACATCCTTAACGAGCATTTCCACCAGAAGCGGAGGATCAGTTCAGGCAGAGGTGCAGCTTATTTGAAGACAATGTCCCTGCACCAGTTTTTGTTGGAACCAATCACATGCCATGCATGGAACCGGGACAGGACCCAAATTGCTATCAGTCCAAACAATCATGAAGTCCATATATACAAGAAAAGTGGGAATCAGTGGGTGAAAGTTCACGAATTAAAAGAACACAACGGGCACATCACCGGCATTGATTGGGCTCCTAAAAGTGATCGTATTGTGACCTGTGGAGCTGACCGTAATGCTTATGTATGGAGTCAAAAGGACGGCGTGTGGAAACCCACCCTTGTTATTCTCAGGATCAACCGTGCTGCCACGTTTGTGAAATGGTCTCCGCTGGAGAACAAGTTTGCAGTGGGGAGTGGAGCGCGACTCATATCCGTTTGCTACTTTGAGTCTGAAAATGATTGGTGGGTTAGTAAACACATCAAGAAGCCCATCCGTTCAACTGTCCTCAGTTTAGACTGGCATCCAAATAATGTGCTTCTGGCAGCTGGGTCATGTGACTTCAAATGCAGGGTATTCTCTGCGTACA gi|50743212|gb|CF661020.2|CF661020 TATGGAGTCAAAAGGACGGCATGTGGAAACCCACCCTTGTTATTCTCAGGATCA*CCGTGCTGCCACGTTTGTGAAATGGTCCCCGCTGGAGAACAAGTTTGCAGTTGGGAGTGGAGCGCGACTCATATCCGTTTGCTACTTTGAGTCTGAAAATGATTGGTGGGTTAGTAAACACATCAAGAAGCCCATCCGTTCAACTGTCCTCAGTTTAGACTGGCATCCAAATAATGTGCTTCTGGCAGCTGGGTCATGTGACTTCAAATGCAGGGTATTCTCTGCGTACATCAAGGAGGTGGATGAGAAACCAGCCCCAACCCCGTGGGGGTCCAAGATGCCCTTTGGGCAGGTGATGTCAGAGTTTGGCGGGGCAGGAAGTGGAGGATGGGTTCACAGCGTCTGTTTCTCAGCCAGTGGGAACAGACTGGCTTGGGTCAGCCATGACAGCACTGTCACTGTAGTGGACCCCACAGTAAGCTCAACGCCAAGCCAGTTAAAGACCGAATTCCTTGCTCTCCTAAGTGTGACTTTTGTTTCTGAGAACAACATTGTGGCAGCAGGTCACGATTGCTGCCCTATGCTGTTCAGTTTTGATGATGGTGGAAACTTGACCTTCATATCCAAGCTGGACATTCCCAAGCAGAGCATCCAGCGCAACATTTCTGCCATGGAGCGCTTCCGCAACATGGACAAGAGGGCCACCACTGAGGACCGCAATAGCACCCTAGAAACCCTGCATCAGAACAGCATCACCCAAGTGTCTATATACGAAGGAGACAAAAGAGATTGTCGCAAATTCTGCACTACAGGAATTGACGGAGCAATGACCATATGGGATTTCAAGACCTTAGAGT Putative SNPs: 433G>A, 495T>C, 519G>T 20. 100 200 300 400 500 600 700 800 900 1000 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+... Cyprinus_Cluster7957.seq.Contig1 CGGGGGATTGAAACGGGAGGCTGTCGACAGTAGGG**CATCTTTTGCATCACTCTCTCCTAAA*CAGGTAGCTTTGAGCCGCAGACATGACGCACCAGTACCCCGCACTCACATCTGAGCAGAAGAAGGAGCTTCAGGACATCGCTCAGCGTATCGTAGCTCCTGGAAAGGGCATCCTCGCTGCAGATGAGTCCACAGGTAGCATGGCAAAGCGACTGAACCCCATCGGTGTTGAGAACACTGAGGAAAACCGCCGTCTGTACCGCCAGATCCTTTT*CTCTGCTGACGAGCGCATTGACAAGTGCATTGGTGGTGTCATCTTCTTCCACGAGACCCTTTACCAGAAAGCTGATGATGGCACACCCTTTGCCAAAATGATCAAGGACAGGGGCATTGTTGTGGGAATCAAGGTTGACAAAGGTGTCGTCCCTCTGGCAGGAACAAATGGAGAGACCACAACACAGGGGCTTGATGGCCTGTCAGAACGCTGTGCTCAGTATAAGAAAGATGGTGCAGACTTTGCCAAGTGGCGGTCTGTACTGAAGATCAGCGAGACCACTCCTTCAGAGTTAGCCATCATGGAGAATGCTAACGTCCTGGCTCGCTACGCCAGCATCTGCCAGCAGAATGGGATTGTGCCCATTGTTGAGCCAGAGATTCTACCTGATGGGGACCACGACTTGAAGCGCTGCCAGTATGTTTCAGAGAAGGTCCTTGCTGCCTGCTACAAGGCCCTGTCTGACCATCGCGTCTATCTGGAGGGAACTCTTCTGAAGCCCAACATGGTGACAGCTGGACACTCCTGCCCCACCAAATTCTCCAATCAGGAAATCGCCATGGCTACAGTGACAGCCTTGCGCCGTACCGTTCCCCCCGCAGTAACAGGTGTGACATTCCTCTCTGGAGGTCAGAGTGAGGAGGAGGCATCTATCAACTTGAACGCCATCAACACCTGCCCTCTGACAAAACCCTGGGCCCTCACCTTCTCCTATGGACGTGCCCTGCAGGCCTCAGCCCTCACCGCCTGGCGCG ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|50741221|gb|CF662330.2|CF662330 CGGGGGATTGAA*CGGGAGGCTGTCGACAGTAGGGGGCATCTTTTGCATCACTCTCTCCTAAA*CAGGTAGCTTTGAGCCGCAGACATGACGCACCAGTACCCCGCACTCACATCTGAGCAGAAGAAGGAGCTTCAGGACATCGCTCAGCGTATCGTAGCTCCTGGAAAGGGCATCCTCGCTGCAGATGAGTCCACAGGTAGCATGGCAAAGCGACTGAACCCCATCGGTGTTGAGAACACTGAGGAAAACCGCCGTCTGTACCGCCAGATCCTTTT*CTCTGCTGACGAGCGCATTGACAAGTGCATTGGTGGTGTCATCTTCTTCCACGAGACCCTTTACCAGAAAGCTGATGATGGCACACCCTTTGCCAAAATGATCAAGGACAGGGGCATTGTTGTGGGAATCAAGGTTGACAAAGGTGTCGTCCCTCTGGCAGGAACAAATGGAGAGACCACAACACAGGGGCTTGATGGCCTGTCAGAACGCTGTGCTCAGTATAAGAAAGATGGTGCAGACTTTGCCAAGTGGCGGTCTGTACTGAAGATCAGCGAGACCACTCCTTCAGAGCTAGCCATCATGGAGAATGCTAACGTCCTGGCTCGCTACGCCAGCATCTGCCAGCAGAATGGGATTGTGCCCATTGTTGAGCCAGAGATTCTACCTGATGGGGACCACGACTTGAAGCGCTGCCAGTATGTTTCAGAGAAGGTCCTTGCTGCCTGCTACAAGGCCCTGTCTGATCATCL gi|50740620|gb|CA966867.2|CA966867 GGGTATTGAATCGGGAGACTGTCGACAGTAGGG**CATCTTTTGCATCACTCTCTTCTAAATCAGGTTGCTTTGAGCCGCAGACATGACGCACCAATACCCCGCACTCACAACTGAGCAGAAGAAGGAGCTCCAGGACATCGCTCAGCGTATCGTAGCTCCTGGGAAGGGCATCCTTGCTGCAGATGAGTCCACAGGTAGTATGGCAAAGCGCCTGAACCCCATTGGCGTCGAGAACACCGAGGAAAACCGCCGTCTGTACCGCCAGATCCTTTTTCTCTGCTGACGAGCGCATAGACAAGTGCATTGGTGGTGTCATCTTCTTCCACGAGACCCTTTACCAGAAAGCTGATGATGGCACACCCTTTGCCAAAATGATCAAGGACAGGGGCATTGTTGTGGGAATCAAGGTGGACAAAGGTGTCGTCCCTCTGGCAGGAACAAATGGAGAGACCACAACACAGGGGCTTGATGGCCTGTCAAAACGCTGTGCTCANTATAAGAAAGACGGTGCAGACTTTGCCAAGTGGAGGTCTGTGCTGAAGATCAGCGAGACCACTCCTTCAGAGTTAGCCATCATGGAGAACGCTAACGTCCTGGCTCGCT gi|109280975|gb|EC393037.1|EC393037 GGGGATTGAAACGGGAGGCTGTCGACAGTAGGG**CATCTTTTGCATCACTCTCTCCTAAA*CAGGTAGCTTTGAGCCGCAGACATGACGCACCAGTACCCCGCACTCACATCTGAGCAGAAGAAGGAGCTTCAGGACATCGCTCAGCGTATCGTAGCTCCTGGAAAGGGCATCCTCGCTGCAGATGAGTCCACAGGTAGCATGGCAAAGCGACTGAACCCCATCGGTGTTGAGAACACTGAGGAAAACCGCCGTCTGTACCGCCAGATCCTTTT*CTCTGCTGACGAGCGCATTGACAAGTGCATTGGTGGTGTCATCTTCTTCCACGAGACCCTTTACCAGAAAGCTGATGATGGCACACCCTTTGCCAAAATGATCAAGGACAGGGGCATTGTTGTGGGAACCAAGGTTGACAAAGGTGTCGTCCCTCTGGCAGGAACAAATGGAGAGACCACAACACAGGGGCTTGATGGCCTGTCAGAACGCTGTGCTCAGTATAAGAAAGATGGTGCAGACTTTGCCAAGTGGCGGTCTGTACTGAAGATCAGCGAGACCACTCCTTCAGAGTTAGCCATCATGGAGAATGCTAACGTCCTGGCTCGCTACGCCAGCATCTGCCAGCAGAATGGGATTGTGCCCATTGTTGAGCCAGAGATTCTACCTGATGGGGACCACGACTTTGAGCGCTGCCAGTATGTTT gi|109280275|gb|EC392678.1|EC392678 LLGGGAATCAAGGTGGACAAAGGTGTCGTCCCTCTGGCAGGAACAAATGGAGAGACCACAACACAGGGGCTTGACGGCCTGTCAGAACGCTGTGCTCAGTATAAGAAAGACGGTGCAGACTTTGCCAAGTGGAGGTCTGTGCTGAAGATCAGCGAGACCACTCCTTCAGAGTTAGCCATCATGGAGAACGCTAACGTCCTGGCTCGCTACGCCAGCATCTGCCAGCAGAATGGGATTGTGCCCATTGTTGAGCCAGAGATTCTACCTGATGGTGACCACGACTTGAAACGCTGCCAGTATGTTACAGAGAAGGTCCTTGCTGCCTGCTACAAGGCCCTGTCTGACCATCGCGTCTATCTGGAGGGAACTCTTCTGAAGCCCAACATGGTGACAGCTGGACACTCCTGCCCCACCAAATTCTCCAATCAGGAAATCGCCATGGCTACAGTGACAGCCTTGCGCCGTACCGTTCCCCCCGCAGTAACAGGTGTGACATTCCTCTCTGGAGGTCAGAGTGAGGAGGAGGCATCTATCAACTTGAACGCCATCAACACCTGCCCTCTGACAAAACCCTGGGCCCTCACCTTCTCCTATGGACGTGCCCTGCAGGCCTCAGCCCTCACCGCCTGGCGCG Putative SNPs: 414T>G, 510T>C, 532C>A, 540A>G, 588T>C 21. 100 200 300 400 500 600 700 800 900 1000 1100 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+..... Cyprinus_Cluster7961.seq.Contig1 GGGGAGGTGTACACACATTCCAGCATATGTATGGCTGTGAATGGGACGATAAGACTGAAGAAACCAGTGGATATCACCAGTATGGATATGATGGAGAGGATTTCATAACTATGGATTTGAAAGAGCTGAGATACATCTCTCCAGTGCAGCAAGGACACATCACTACGCAGAAGTGGAACGAAAACAAAGCCCAGATTGAGAATAACAAACTTTACTACAGCACTATATGCATTGAGTGGCTGCAGAAGTATCTACAG*TATGGAAAGAGCAGCCTGGAGAAAAAAGTCTCTCCTCAGGTGTCTCTGCTGCAGAAGTCTTCCTCGTCTCCAGTCACGTGTCATGCTACAGGTTTTTACCCCAGTGGAGTAACAATCACCTGGATGAAAAATGGACAAGATCATGATGAGGATGTGGATCTTGGTGAACTTCTTCTCAATGAGGACGGGACTTTCCAGAAGA*CGAGCACCCTCAATGTTAAACCTGATGAGTGGAAGAAGAACAAGTTCAGCTGTGTGGTGGAACATCAGGGCAAAACCATCAGAGAGATCCTGACAGAGGACAAGATCAAAACTAACTACGCTCCTTTCCCCATCGGCATCATCATTGGTATTGTTGTTGCTGTCCTCCTGTTGATTGTGATTGGTGTTGCTGGGTATAAGGTCTATCAGAAAAAGAAAGGCTTCAAACCTGTTAATGGCTCTGATGATGGATCGAACAGCTCAGCTCATACAGATCCAAAAGCATAAAGATGAGACCAGATGAGTGCGAGAGATGAAGTAAAACATGATGCTTATCCTGCTGTCCATCTTGCTTACAACACACACACACGCACACACAATCATAGTTTTCAGTGATGGGATTTATCTATATTATGGTTCTACATTAATTACATCTGCAAAGTAAAGTTTTTATTTCTTCACACTTTATGTTCCTCTTTTGTTTTTCTTTAATTGTATGAACTTTCATTCATTTTAAGATGG*CATGTTGATCTCAGAGCTTAATTGTAAAATATATATATATTTCTCTTTGGTGACCAAAAGAAACCAAGAATACAAATAATTGATTTGCGAGTTTGATTAATTTGTAGGATTTGTGATATCTGTACTGATTATGAAACAAGAGAAACTTGTGA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|109279228|gb|EC392139.1|EC392139 GGGGAGGTGTACACACATTCCAGCATATGTATGGCTGTGAATGGGACGATAAGACTGAAGAAACCAGTGGATATCACCAGTATGGATATGATGGAGAGGATTTCATAACTATGGATTTGAAAGAGCTGAGATACATCTCTCCAGTGCAGCAAGGACACATCACTACGCAGAAGTGGAACGAAAACAAAGCCCAGATTGAGAATAACAAACTTTACTACAGCACTATATGCATTGAGTGGCTGAAGAAATATATACAG*TATGGAAAAAGCAGCCTGGAGAAAACAGTCTCTCCTCAGGTGTCTCTGCTGCAGAAGTCTTCCTCGTCTCCAGTCACGTGTCATGCTACAGGATTTTACCCCAGTGGAGTAACAATCACCTGGATGAAAAATGGACAAGATCATGATGAAGATGTGGATCTTGGTGAACTTCTTCCCAATGAGGACGGGACTTTCCAGAAGA*CGAGCACCCTCAATGTAAAACCTGATGAGCTGAAGAAGAACCAGTTCAGCTGTGTGGTGGAACATCAGGGCAAAACCATCAGAGAAATACTGACAGALLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL gi|109279580|gb|EC392319.1|EC392319 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLTGCATTGAGTGGCTGCAGAAGTATCTACAG*TATGGAAAGAGCAGCCTGGAGAAAAAAGTCTCTCCTCAGGTGTCTCTGCTGCAGAAGTCTTCCTCGTCTCCAGTCGTGTGTCATGCTACAGGTTTTTACCCCAGTGGAGTAACAATCACCTGGATGAGAAATGACCAAGAGCATCATGAGGATGTGGAGGTTGGTGAACTTCTTCTCAATGAGGATGGAACCTTTCAGAAGA*CGAGCACCCTCAATGTTAAACCTGATGAGTGGAAGAAGAATGAGTACAAATGTGTGGTGGAACATCAGGGCAAAACC****GAGACAGC**GAATGAGATCAGGA*CAAA*CAATGTAGAGTCTGTTCCC*ATTGGCATAATTGTTGGTGCTGTTGCTGCTGTGGTTCTGTTGGTTGTCATTGCTGTTGCTGCGTATATGGTGTATCAGAAGAAAAAAGGCTTTAAACCTGTCAGCGCCTCTGATGATGGTTCTAACAGCTCAGCTCATACAGATCCGCATGCATGAAGAT gi|109282134|gb|EC393645.1|EC393645 LLLGGCTACAGAAGTATGTG*AGATATGGCAAGGACACTCTGGAGAGAAAAGTCTCTCCTCAGGTGTCTCTGTTGCAGAAGGATCCTTTATCTCCAGTCACATGTCACACTACAGGTTTTTACCCCAGTGGAGTAACTATCACCTGGCAGAAAAATGGACAAGATCATGATGAGGATGTGGATCTTGGAGAACTTATTATCAATGAGGACGGGACCTTCCAGA*GAGCAAGCACCCTCAATGTTAAACCTGAAGAGTGGAAGAACAACAAGTTCAGCTGTGTGGTGGAGCACCAGGGCAAAACCATCAGAGAGATCCTGACAGAGGACAAGATCAAAACTAACTACGCTCCTTTCCCCATCGGCATCATCATTGGTATTGTTGTTGCTGTCCTCCTGTTGATTGTGATTGGTGTTGCTGGGTATAAGGTCTATCAGAAAAAGAAAGGCTTCAAACCTGTTAATGGCTCTGATGATGGATCGAACAGCTCAGCTCATACAGATCCAAAAGCATAAAGATGAGACCAGATGAGTGCGAGAGATGAAGTAAAACATGATGCTTATCCTGCTGTCCATCTTGCTTACAACACACACACACGCACACACAATCATAGTTTTCAGTGATGGGATTTATCTATATTATGGTTCTACATTAATTACATCTGCAAAGTAAAGTTTTTATTTCTTCACACTTTATGTTCCTCTTTTGTTTTCCTTTAAT*GTATGAACTTTCATTCATTTTAAGATGGGCATGTLLLL gi|109281677|gb|EC393394.1|EC393394 LLLGGAGCACCAGGGCAAAACCATCAGAGAGATCCTGACAGAGGACAAGATCAAAACTAACTACGCTCCTTTCCCCATCGGCATCATCATTGGTATTGTTGTTGCTGTCCTCCTGTTGATTGTGATTGGTGTTGCTGGGTATAAGGTCTATCAGAAAAAGAAAGGCTTCAAACCTGTTAATGGCTCTGATGATGGATCGAACAGCTCAGCTCATACAGATCCAAAAGCATAAAGATGAGACCAGATGAGTGCGAGAGATGAAGTAAAACATGATGCTTATCCTGCTGTCCATCTTGCTTACAACACACACACACGCACACACAATCATAGTTTTCAGTGATGGGATTTATCTATATTATGGTTCTACATTAATTACATCTGCAAAGTAAAGTTTTTATTTCTTCACACTTTATGTTCCTCTTTTGTTTTTCTTTAATTGTATGAACTTTCATTCATTTTAAGATGG*CATGTTGATCTCAGAGCTTAATTGTAAAATATATATATATTTCTCTTTGGTGACCAAAAGAAACCAAGAATACAAATAATTGATTTGCGAGTTTGATTAATTTGTAGGATTTGTGATATCTGTACTGATTATGAAACAAGAGAAACTTGTGA Putative SNPs: 523A>G, 526T>C 22. 100 200 300 400 500 600 700 800 900 1000 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.. Cyprinus_Cluster7969.seq.Contig1 GGGGAATCAGCTGAAGACTGAAGACACTGCAGTATATTACTGTGCAAGAGGGGTGGATTACTTCGACTACTGGGGGAAAGGAACCAAAGTCACCGTTTCCTCAGCTGAATCATCTCCACCAACGTCAATCTTCGCCATGTCCCAGTGTACTCCTGATTCTACTGGGTACGTCACCATCGGCTGCATGGCAAGAGGTTTCTCACCTGCGGACTCGCTGACTTTTAAATGGACGGATTATAATACGAAGGAGTTGAGTGATTTCGTGCAGTATCCAGCATTCGGCAGTGGTGGAGAATATGCCAAAGTCAGCCATATGCGCGTGAGAAAAAGCGAGTTGGATCCTCAAAAACCATACAACTGCGAAGCTTCAAATTCTAAAGGCAAAAAGAATAGTAAAGTTCCTCTTCTTCCACCACCCCCACCGCCAGATGTGCGTGCAACTGTGTACTTAACAGCACCTACAAAAATGGATTTAGAGAACGAAACAGCAACCTTCATGTGTTTAGCCCAACGGTTTTCGCCTAAATCACACACGTTTAAGTGGTTTCTGGATGGTAACGAGCTGAAAA*AAACGATAGAAAATTATGACAAAAGTGAGAAGAAAGGCTCAGTAACCGAATATAGTGCAACAAGCATTTTGCAAATCAGTGCCGAAGCCTGGAAGAAGCAAACCAGCAAAGTTAAGTGTGAGTTCGTGCACAAGGCGGGAAATGAAGAAAGAGAGGCCGAATATGCAGTTCCTATTCAAGATTGCAGCGATATTGCTGTTGATATAGTGCCTCCCTCCCTTGAAGCCATGCTGAAAAATAGAACAGGAGTGCTGAAGTGCAAAGCTTTATCAGAAAATCCAGGATTCGGCAAAATAACAATAACAGCTAATAATAACAACATCGCTGAGAAAGATATAAAGGGCAACGAAAAACATGTGGAACTTGATGCCCCGATTGGCTATGAAGAATGGGAGCAACGGCACTGAATTTACATGCACCGTTGAGCACAACGAGCTAGCAGAGCCCAAGTC -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|109278691|gb|EC391864.1|EC391864 GGGGAATCAGCTGAAGACTGAAGACACTGCAGTATATTACTGTGCAAGAGGGGTGGATTACTTCGACTACTGGGGGAAAGGAACCAAAGTCACCGTTTCCTCAGCTGAATCATCTCCACCAACGTCAATCTTCGCCATGTCCCAGTGTACTCCTGATTCTACTGGGTACGTCACCATCGGCTGCATGGCAAGAGGTTTCTCACCTGCGGACTCGCTGACTTTTAAATGGACGGATTATAATACGAAGGAGTTGAGTGATTTCGTGCAGTATCCAGCATTCGGCAGTGGTGGAGAATATGCCAAAGTCAGCCATATGCGCGTGAGAAAAAGCGAGTTGGATCCTCAAAAACCATACAACTGCGAAGCTTCAAATTCTAAAGGCAAAAAGAATAGTAAAGTTCCTCTTCTTCCACCACCCCCACCGCCAGATGTGCGTGCAACTGTGTACTTAACAGCACCTACAAAAATGGATTTAGAGAACGAAACAGCAACCTTCATGTGTTTAGCCCAACGGTTTTCGCCTAAATCACACACGTTTAAGTGGTTTCTGGATGGTAACGAGCTGAAAA*AAACGATAGAAAATTATGACAAAAGTGAGAAGAAAGGCTCAGTAACCGAATATAGTGCAACAAGCATTTTGCAAATCAGTGCCGAAGCC gi|109281994|gb|EC393564.1|EC393564 LLLGGAGTTGAGTGATTTCGTGCAGTATCCAGCATTCGGCAGTGGTGGAGAATATACCAAAGTCAGCCATATGCGCGTGAGAAAAAGCGAGTTGGATCCTCAAAAACCATACAACTGCGAAGCTTCAAATTCTAAAGGCAAAAAGAATAGTAAAGTTCCTCTTCTTCCACCACCCCCACCGCCAGATGTGCGTGCAACTGTGTACTTAACAGCACCTACAAAAATGGATTTAGAGAACGAAACAGCAACCTTCATGTGTTTAGCCCAACGGTTTTCGCCTAAATCACACACGTTTAAGTGGTTTCTGGATGGTAACGAGCTGAAAA*AAACGATAGAAAATTATGACAAAAGTGAGAAGAAAGGCTCAGTAACCGAATATAGTGCAACAAGCATTTTGCAAATCAGTGCCGAAGCCTGGAAGAAGCAAACCAGCAAAGTTAAGTGTGAGTTCGTGCACAAGGCGGGAAATGAAGAAAGAGAGGCCGAATATGCAGTTCCTATTCAAGATTGCAGCGATATTGCTGTTGATATAGTGCCTCCCTCCCTTGAAGCCATGCTGAAAAATAGAACAGGAGTGCTGAAGTGCAAAGCTTTATCAGAAAATCCAGGATTCGGCAAAATAACAATAACAGCTAATAATAACAACATCGCTGAGAAAGATATAAAGGG gi|109279182|gb|EC392115.1|EC392115 LLLLLTGGAGACTATAGCAAAATCAGCCATCTGCGCGTGAGGAAAAGTGATTGGGATGCTAAAAAACCTTACAAATGCGAAGCTTCAAATTCTGAGGGCAGTAA****AG*AAACTAC*TCTTGTTCCATCACCCCCACCGCCAGATCAGCATGCAGATGTGTACTCAACAGTACCTACAAAAATGGAGTTAGACAATGGAACAGCAACCTTCATGTGTTTAGCCCAGCGGTTTTCACCTAAAACATGTGAGTTTAAGTGGTATCAGGATGGTAAGGAGGTGACAG*ATGCAATAGACAAATATGACAAAAGTGAGAAGAAAGGCTCAGTAACCGAATATAGTGCCACAAGCATTTTGCAAATCAGTGCCGACAAATGGAATCACCCAAACAACAAAATTAAGTGTGAGTTCGTGCACAAGACGGGAAAGAAAGTTATTGTGGCAGAATATGCAGTTCCTATTCAAGATTGCACCAATATTGCTGTTGATATAGTGCCTCCCTCCCTTGAAGACATGCTGAAAAATAGACAAGGAGTGCTGAAGTGCAAAGCTTCAGCAGACAATTCAGGTTTCACCAAAATAAAAATAGAAGCGAATAATAATATCATCGCTGAGLLLLLLLLLLLL gi|22022009|gb|AU279277.1|AU279277 CAACTGTGTACTTAACAGCACCTACAAAAATGGATTTAGAGAACGAAACAGCAACCTTCATGTGTTTAGCCCAACGGTTTTCGCCTAAATTATACACGTTTAAGTGGTCTCTGGATGATAAAGAGGTGAAAGTAAACGATAGAAAGTTATGACAAAAGTGAGAAGAAAGGCTCAGTAACCGAATATAGTGCCACAAGCATTTTGCAAATCAAGGCCGAAGCCTGGAAGAAGCAAACCAGCAAAGTTAAGTGTGAGTTCGTGCACAAGGCGGGAAATGAAGAAAGAGAGGCCGAATATGCAGTTCCTATTCAAGATTGCAGCGATATTGCTGTTGATATAGTGCCTCCCTCCCTTGAAGCCATGCTGAAAAATAGAACAGGAATGCTGAAGTGCAAAGCTTTATCAGAAAATCCAGGATTCGGCAAAATAACAATAACAGCTAATAATAACAACATCGCTGAGAAAGATATAAAGGGCAACGAAAAACATGTGGAACTTGATGCCCCGATTGGCTATGAAGAATGGGAGCAACGGCACTGAATTTACATGCACCGTTGAGCACAACGAGCTAGCAGAGCCCAAGTC Putative SNPs: 530C>T, 563C>G, 569A>G, 629A>C 23. 100 200 300 400 500 600 700 800 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+......... Cyprinus_Cluster7974.seq.Contig1 GGGGAGTTACTGGTCAAGATGAGAGGCTTACTGTTCCTGCTCAACGCTCTGCTCCTGCTGGAGTCAACAAAGGGATTGATGAAATATGATGAGTTAAATGATCATGACAGAGAAATTGTTGACAGGGCAATAGAACAAGCCAATAAGGATTTTGGAAAAA*CCAAACACCTTGACTTTTACACCATTGTCAATAGAAATAAAGATATGGTCAATGTGATCCTGAGATCCACCTCATGTGACAGCAAAATGCCGAGCGTCCATCAGAAAGAATGTAAACTCCAAGAGAAGCCACCTCAGGTTT*CCTGTATTGACTGTCAAGGAATCATGGAACC*ATGTTTACTTCTCAGACATATGGACGAGATTAAAAAAAGGATGGATGAATGTACCCTGACAGAAGA*TAATCATTTCACTGGGGGAGGACATTCACGGTTCTAAAAATCAGGAAATGGACACCAGCAACAAACTGGATGTCTTGGATGCATCTGAGATGTAAAAAGGATCAAGGACAATTGCAACTGGCCATTTGAAGAAGAAGATGATGTACATAACAGATAATTTTCAAAAATCTTTTACATGTTGCATTTAATATATATATTATATAT*TGACATATTGATATTAATATTATTAATGATCCCTTCTTGCCAC*GACACATGGAACTGCTCATGAATCTTCTTGATGAATCATTGCTGAATCAATGTGAACAACTGGATGCCTCCCACCCTA*CCCTCCTGTTTTGGGCCATTGGTGTACTTCCATTTCCATGGATGTTCCTCAAATCAGGTGCTTTGACATTGGCCCTCTTATGTTCAAAGTCGCATTGCCCATATGACGCTTTGTTTCAA --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|27494089|gb|CA967532.1|CA967532 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLAAGGCACCTGAGGTCT*CCTGCATTGACTGCCACGGAATCATGGTACC*CTGTTGACTTGTCAAACGTAAGGAACAGATTAAACAGAGGATGGATTAATGTTCCCCTACAGAGGA*TAATTATTTCATTGGGGGAGCACATTCACTGTTCCAAAAATCACGAGATGGACACCAGCTACAACCTGGATGTCTTGGATGCATCTGAGATGTACTAAGGATCATTGACAATTGCGACTACTCATTCGACGATGAAGATGATGTACATAACAGATAATTTATACGAAGCCTTTACATGTTATATTGAATATATATATTATATCTATGACATATTGATTTTA*TATGATAAAAGATCCCTTCTTGCCAC*GACACATGGAACTGCTCATGAATCTTCTTGATGAATCATTGCTGAATCAATGTGAACAACTGGATGCCTCCCACCCTA*CCCTCCTGTTTTGGGCCATTGGTGTACTTCCATTTCCATGGATGTTCCTCAAATCAGGTGCTTTGACATTGGCCCTCTTATGTTCAAAGTCGCATTGCCCATATGACGCTTTGTTTCAA gi|50740923|gb|CA967088.2|CA967088 GGGGAGTTACTGGTCAAGATGAGAGGCTTACTGTTCCTGCTCAACGCTCTGCTCCTGCTGGAGTCAACAAAGGGATTGATGAAATATGATGAGTTAAATGATCATGACAGAGAAATTGTTGACAGGGCAATAGAACAAGCCAATAAGGATTTTGGAAAAA*CCAAACACCTTGACTTTTACACCATTGTCAATAGAAATAAAGATATGGTCAATGTGATCCTGAGATCCACCTCATGTGACAGCAAAATGCCGAGCGTCCATCAGAAAGAATGTAAACTCCAAGAGAAGCCACCTCAGGTTTTCCTGTATTGACTGTCAAGGAATCATGGAACC*ATGTTTACTTCTCAGACATATGGACGAGATTAAAAAAAGGATGGATGAATGTACCCTGACAGAAGA*TAATCATTTCACTGGGGGAGGACATTCACGGTTCTAAAAATCAGGAAATGGACACCAGCAACAAACTGGATGTCTTGGATGCATCTGAGATGTAAAAAGGATCAAGGACAATTGCAACTGGCCATTTGAAGAA*AA************AA****TAATTTTCAAAAATCTTTTACATGTTGCATTTAATATATATATTATATAT*TGA**TATTGATATTAATATTATTAATGATCCCTTCTTGGGACAGAGACAAGGAAATGCTCATGAATATTTTTTTTTATT*ATTGCTGTAACA*TGTGAATAACTGGATGCCCCCTCCCCTTTCCCTCCTTTTTTGGGTCATTGATTTACTTCCCATTCCAT gi|50733783|gb|CA970464.2|CA970464 GGGGGTTACTGGTCAAGATGAGAGGCTTACTGTTCCTGCTCAACGCTCTGCTCCTGCTGGAGTCAACAAAGGGATTGA***AATATGATGAGTTAAATGATCATGACAGAGGAATTGTTGACAGGGCAATAGACCGAGCCAATAAGGATTATGGAAAAA*CCAAACACCTTGACTTTTACACCATTGTCAATAGAAATAAAGATATGGTCAATGTGATCCTGAGATCCACCTCGTGTGACAGCAAAACACCGAGTGTCCATCAGAAAGACTGTGAACTCCACAAGGAGCCACCTCAGGTTT*CCTGTATTGACTGTAAAGGAACCATGGAACC*ATGTTTACTTCTCAAACATATGGACGAGATTAAAAAAAGGGCGGAGAAATGTTCCCCGTCA*ATGAATAGTCATCTTTCTGGGGGAGCACATTCACTGTACCAAAAATCAGGAAATGGACACCAGCAACAAACTGGATGTCTTGGATGTATCTGAGATGTAAAAAGGATCAAGGACAATTGCAACTAGCCATTTGAAGAAGAALLLLLLLLLLL gi|50734649|gb|CA968482.2|CA968482 LCTGTTCCTGCTCAACGCTCTGCTCCTGCTGGAGTCAACAAAGGGATTGACCAAATATTATGAGTTAAATGATCATGGCACACAAATTGTTGGCGGCGGGGTAAAACAAACCAATAACGATTTTTGAAAAAACCAAACACCTTGACTTTTACACCATTGTCAATACAAATAAACATATGGTCAATGTGATCCTGAGATCCACCTCATGTGACAGCAAAATGCCGAGCGTCCATCATAAAGAATGTAAACTCCAATAGAACCCACCTCAGGTTT*CCAGTATTGACTGTCAAGGAATCATGGAACCGAGGGGTACTTCTCTCACATATGGACGAGATTAAAAAAAGGATGGATGAATGTACCCTGACACAAAA*TAATCATTTCACTGGGGGAGGACATTCACGGTTCTAAAAATCAGGAAATGGACACCACCAACAAACTGGATGTCTTGGATGCATCTCAGATGTAAAAAGGATCAAGGACAATTGCAACTGGCCATTTGAA*AA*AA************AA***ATAATTTTCAAAAATCCTTTACATGTTGCATTTAATATATATATTATATAT*TGA**TATTGATATTAATATTATTAATGATC Putative SNPs: 388T>A, 392C>T, 423C>G, 432T>G, 437C>T, 522A>G 24. 100 200 300 400 500 600 700 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+. Cyprinus_Cluster7980.seq.Contig1 TGTCTTGTAGAGGACGTTGGAGTCACAGTCACGATGGGCTCTATATCAAATATTAATTTTAAAACAGCAAGCACCTACAGAAAATCGAGCCACCATG*TTCTCCCGCATCGCTAGACCTACCGCCACCCTCCTCCGGAGCCTGTCCACCTCCTCCCAGCACAATGCGAAAGTAGCTGTTTTGGGTGCCTCAGGTGGCATCGGGCAGCCCCTGTCTCTCCTGCTGAAGAACAGCCCTTTAGTGAGCGAGCTTTCGCTCTACGATATTGCTCACACTCCTGGAGTAGCTGCTGACCTCAGTCACATTGAGACCAGAGCCACTGTCACAGGATACATGGGAGCAGATCAGCTGGGTGCTGCACTGAAAGGTTGTGAAGTTGTTGTCATCCCTGCTGGTGTCCCAAGGAAGCCTGGTATGACCCGTGATGATCTGTTTAACACCAATGCCACCATTGTGGCCACATTAGCTGATGCTTGTGCCCGTCACTGTCCTCAGGCCATGATCTGCATCATTTCAAACCCAGTGAACTCCACCATCCCGATCACATCAGAGGTGATGAAGAAACATGGCGTCTACAACCCCAACAGAGTCTTTGGTGTCACAACACTGGATATTGTCAGAGCAAACGCTTTTGTTGCTGAGCTCAAAGGCCTTGATCCCGCCAGAGTCAACGTGCCTGTTGTTGGAGGTCATGCAGGAAAGACCATCATTCCTCTCATTTCACAGTGCACTCCCAAGGGTTGAGTTCCCTACAGATCAGCTGTCTGCTTTGACAGGCCGTA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|50742674|gb|CF660620.2|CF660620 TGTCTTGTAGAGGACGTTGGAGTCACAGTCACGATGGGCTCTATATCAAATATTAATTTTAAAACAGCAAGCACCTACAGAAAATCGAGCCACCATG*TTCTCCCACATCGCTAGACCTACCGCCACCCTCTTCCGGAGCCTGTCCACCTCCTCCCAGCACAATGCAAAAGTAGCTGTTTTGGGTGCCTCAGGTGGCATCGGGCAGCCCCTGTCTCTCCTGCTGAAGAACAGCCCTTTAGTGAGCGAGCTTTCACTTTACGATATTGCCCACACTCCTGGAGTAGCTGCTGACCTCAGTCACATTGAGACCAGAGCCACCGTCACAGGCTACATGGGAGCGGATCAGCTGGGTGCTGCACTGAAAGGCTGTGAAGTTGTTGTCATCCCTGCTGGTGTCCCAAGGAAGCCTGGTATGACCCGTGATGATCTGTTTAACACCAATGCCACCATCGTGGCCACATTAGCTGATGCTTGTGCCCGTCACTGCCCTCCGGCCATGATCTGCATCATTTCAAACCCTGTGAACTCCACTATCCCAATCACATCAGAGGTGATGAAGAAACATGGCGTCTACAACCCCAACAGAGTCTTTGGTGTCACAACACTTGATATTGTCAGAGCAAACGCTTTTGTTGCTGAGCTCAAAGGCCTTGATCCCGCCAGAGTCAACGTGCCCGTTGTTGGAGGTCATGCAGGAAAGACCATCATTCCTCTCATTTCACAGTGCACTCCCAAGG*TTGAGTTCCCTACAGATCAGCTGTCTGCTTTGA gi|50742106|gb|CF662977.2|CF662977 GTCAGGAGGGGCTCTATATCAAATATTAATTTTAAAACAGCAAACACCTACAGAAAATCAAGCCACCATGGTTCTCCCGCATCGCTAGACCTACCGCCACCCTCCTCCGGAGCCTGTCCACCTCCTCCCAGCACAATGCGAAAGTAGCTGTTTTGGGTGCCTCAGGTGGCATCGGGCAGCCCCTGTCTCTCCTGCTGAAGAACAGCCTTTTAGTGAGCGAGCTTTCACTTTACGATATTGCCCACACTCCTGGAGTAGCTGCTGACCTCAGTCACATCGAGACCAGAGCCACCGTCACAGGCTACATGGGAGCAGATCAGCTGGGTGCTGCACTGAAAGGCTGTGAAGTTGTTGTCATCCCTGCTGGTGTCCCAAGGAAGCCTGGTATGACCCGTGATGATCTGTTTAACACCAATGCCACCATTGTGGCCACATTAGCTGATGCTTGTGCCCGTCACTGCCCTCAGGCCATGATCTGCATCATTTCAAACCCAGTGAACTCCACTATCCCAATCACATCAGAGGTGATGAAGAAACATGGCGTCTACAACCCCAACAGAGTCTTTGGTGTCACAACACTGGATATTGTCAGAGCAAACGCTTTTGTTGCTGAGCTCAAAGGCCTTGATCCCGCCAGAGTCAACGTGCCTGTTGTTGGAGGTCATGCAGGAAAGACCATCATTCCTCTCATTTCACAGTGCACTCCCAAGGGTTGAGTTCCCTACAGATCAGCTGTCTGCTTTGACAGGCCGTA gi|50734425|gb|CA968275.2|CA968275 LLLLLLLGGCTCTATATCAAATATTAATTTTAAAACAACAAGCACTAACAGAAAATCGAGCCAGCATG*TTCTCCCGCATCGCCAGAGCAACCGCCACCCTCATCCGGGGCTTGTCCACCTCCTCCCAGCACAATGCGAGAGTAGCTGTCTTGGGTGCCTCAGGTGGCATCGGGCAGCCCCTGTCCCTCCTGCTGAAGAACAGCCCTTTAGTGAGCGAGCTTTCGCTCTACGATATTGCTCACACTCCTGGAGAGGCTGCTGACCTCAGTCACATTGAGACCAGAGCCACTGTCACAGGATACATGGGAGCAGATCAGCTGGGTGCTGCACTGAAAGGTTGTGAAGTTGTTGTCATCCCTGCTGGTGTCCCAAGGAAGCCTGGTATGACCCGTGATGATCTGTTTAACACCAATGCCACCATTGTGGCCACATTAGCTGATGCTTGCGCCCGTCACTGTCCTCAGGCCATGATCTGCATCATTTCAAACCCAGTGAACTCCACCATCCCGATCACATCAGAGGTGATGAAGAAACATGGCGTCTACAACCCCAACAGAGTCTTTGGTGTCACAACACTGGATATTGTCAGAGCAAACACTTTTGTTGC gi|6438095|gb|AU081390.1|AU081390 LLGCTGAAGAACAGCCCTTTAGTGAGCGAGCTTTCGCTCTACGATATTGCTCACACTCCTGGAGTGGCTGCTGACCTCAGTCACATTGAGACCAGAGCCACTGTCACAGGATACATGGGAGCAGATCAGCTGGGTGCTGCACTGAAAGGTTGTGAAGTTGTTGTCATCCCTGCTGGTGTCCCAAGGAAGCCTGGTATGACCCGTGATGATCTGTTTAACACCAATGCCACCATTGTGGCCACATTAGCTGATGCCTGTGCCCGTCACTGTCCTCAGGCCATGATCTGCATCATTTCAAACCCAGTGAACTCCACCATCCCGATCACATCAGAGGTGATGAAGAAACATGGTGTCTACAACCCCAACAGAGTCTTTGGTGTCACAACACTGGATATTG Putative SNPs: 254A>G, 257T>C, 269C>T, 284A>G, 320C>T, 329C>A, 368C>T, 488C>T, 533T>C, 539A>G 25. 100 200 300 400 500 600 700 800 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.. Cyprinus_Cluster7986.seq.Contig1 GGGGGCAGAGGAAGATGGCGTCCGGCGTGAGGCAGGAGCTCGCACAGCTGATGAACTGTAGCGGCTCTCACAAAAGATCTAAGCTGGGAAGTATGTCATTTCAAGTCATTGACTGATATTGTTACCCACTGTCCGTCTACTGCACGAATGAACTGCTGTGTGGGTATTCCGTCGGAGAGAAGTGATGCTGCAGGCCAACATCAGCTCGCGTGAGGAGATGCAGCTCAGAGGATCTCTCTGTCAACAACATGCCTACACTAGCTTTACGACTATCGGAAGAAGTTACACGTGCAAAGTTGATATTATTAATGGATATCGTCAAATATTAGAAAAGGCTCTGCAGTTTATTGATGCAGAACAACTTGAGGCACTGAAAGCATTTGTTGAAGCGATGGTCAATGAGAACGTCAGCCTGGTCATATCCAGACAGCTGTTGACAGACTATTGCACGCACCTTCTCAACCTGCCGGACGGCACTGCGAAAGCCGTGTGTCACTTCACCCTGGAGAAGATCCAACCCAGAGTCATCTCATTTGAAGAACAGGTGGCTTCTATCAGACAGCATCTAGCCGCAATCTACGAGAAAGAGGAGGACTGGAGGAACGCCGCGCAGGTTCTTGTGGGAATCCCGCTGGAGACGGGTCAGAAACAGTACAATGTGGACTATAAATTGGACACTTATCTGAAAATCGCCCGTCTGTATTTGGAGGACGATGACCCGGTTCAGGCCGAGGCCTACATCAACCGAGCTTCTTTACTTCAGAATGAATCCACCAATGAACAGCTGCAGATTCACTACAAGGTCTGTTACTCCAGAGTTCTGGACTATCGGAGGAAGTTCATTGAAGCAGCTCAGCGCTACAATGAGCTTTCTTACAAATCCATCGTCCAT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|109282519|gb|EC393830.1|EC393830 GGGGGCAGAGGAAGATGGCGTCCGGCGTGAGGCAGGAGCTCGCACAGCTGATGAACTGTAGCGGCTCTCACAAAAGATCTAAGCTGGGAAGTATGTCATTTCAAGTCATTGACTGATATTGTTACCCACTGTCCGTCTACTGCACGAATGAACTGCTGTGTGGGTATTCCGTCGGAGAGAAGTGATGCTGCAGGCCAACATCAGCTCGCGTGAGGAGATGCAGCTCAGAGGATCTCTCTGTCAACAACATGCCTACACTAGCTTTACGACTATCGGAAGAAGTTACACGTGCAAAGTTGATATTATTAATGGATATCGTCAAATATTAGAAAAGGCTCTTCAGTTTACAGACGCAGAACAACTTGAGGCACTGAAAGCATTTGTTG****GATGGTCAATGAGAACGTCAGCCTGGTCATATCCAGACAGCTGTTGACAGACTTCTGCACGCACCTCCTAAACCTGCCGGACGGCACTGCGAAAGCCGTGTGTCACTTCACCCTGGAGAAGATCCAGCCCAGAGTCATCTCATTTGAAGAACAGGTGLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL gi|50740863|gb|CA967025.2|CA967025 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLATATCGTCAAATATTAGAAAAGGCTCTGCAGTTTATTGATGCAGGAGA*CTTGAGGCACTGAAAGCATTTGTTGAAGCGATGGTCAATGAGAACGTCAGCCTGGTCATATCCAGACAGCTGTTGACAGACTATTGCACGCACCTTCTCAACCTGCCGGACGGCACTGCGAAAGCCGTGTGTCACTTCACCCTGGAGAAGATCCAACCCAGAGTCATCTCATTTGAAGAACAGGTGGCTTCGATCAGACAGCATCTAGCCGCAATCTACGAGAAAGAGGAGGACTGGAGGAACGCCGCGCAGGTTCTTGTGGGAATCCCGCTGGAGACGGGTCAGAAACAGTACAATGTGGACTATAAATTGGACACTTATCTGAAAATCGCCCGTCTGTATTTGGAGGACGATGACCCGGTTCAGGCCGAGGCCTACATCAACCGAGCTTCTTTACTTCAGAATGAATCCACCAATGAACAGCTGCAGATTCACTACAAGGTCTGTTACTCCAGAGTTCTGGACTATCGGAGGAAGTTCATTGAAGCAGCTCAGCGCTACAATGAGCTTTCTTACAAATCCATCGTCCAT gi|50738931|gb|CA965550.2|CA965550 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLATATCGTCAAATATTAGAAAAGGCTCTGCAGTTTATTGATGCAGAACAACTTGAGGCACTGAAAGCATTTGTTGAAGCGATGGTCAATGAGAACGTCAGCCTGGTCATATCCAGACAGCTGTTGACAGACTATTGCACGCACCTTCTCAACCTGCCGGACGGCACTGCGAAAGCCGTGTGTCACTTCACCCTGGAGAAGATCCAACCCAGAGTCATCTCATTTGAAGAACAGGTGGCTTCTATCAGACAGCATCTAGCCGCAATCTACGAGAAAGAGGAGGACTGGAGGAACGCCGCGCAGGTTCTTGTGGGAATCCCGCTGGAGACGGGTCAGAAACAGTACAATGTGGACTATAAATTGGACACTTATCTGAAAATCGCCCGTCTGTATTTGGAGGACGATGACCCGGTTCAGGCCGAGGCCTACATCAACCGAGCTTCTTTACTTCAGAATGAATCCACCAATGAACAGC gi|50734490|gb|CA968341.2|CA968341 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLGATATCGTCTAATATTAGAGAGGGCTCTTCAGTATATTGATGCAGAACAACTTGATGCACTGAAAGCATTTGTTGAAGCGATGGTCAATGAGAACGTCAGCCTGGTCATATCCAGACAGCTGTTGACAGACTATTGCACGCACCTTCTCAACCTGCCGGACGGCACTGCGAAAGCCGTGGGTCACTTCATCCTGGAGAAGATCCAGCCCAGATTCATCTCATTTGAA Putative SNPs: 340T>G, 517G>A 26. 100 200 300 400 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.... Cyprinus_Cluster7988.seq.Contig1 ACGAATGCACTGATGCTTCAAGATTTATAATATCACCCAGGAAGTATTGGTTAGAAGGTCTCTCGAATCTCCAGTCATCAGTCATGAGTTTGAGGGAGAAGACAAAGATCTCCTCTGCAACTTCAGTAGAGGTATATGGGGTCCAAGTGGGCCCCAAGGAATCGCTGCTCACATTATGCTTTCTTGAATAGTGACACTCG*ATACCAACCACCGCACTACTGCTCCTAACAATAGGAACACCATAGGAAAGTTCTTGTGGGGTGTAGATAAGTTTGAAGGTATAGACAAGCTCATCATTAGTCACCGTT*ACTATACTGCCACATCCATGCAGTTCAGACTCAAAGATAAGCACTTGAGCAGAAGGGTCTTCTCCAGTTGCAATACAACCTCCCAGTGTAAAAGCAGAGGGCATTAGTAGTTGTCCAGTGCCAAAGAAGTCTTTCAACACTTCCACATATATTG -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|6438135|gb|AU081430.1|AU081430 ACGAATGCACTGATGCTTCAAGATTTATAATATCACCCAGGAAGTATTGGTTAGAAGGTCTCTCGAATCTCCAGTCATCAGTCATGAGTTTGAGGGAGAAGACAAAGATCTCCTCTGCAACTTTAATAGAGGTATATGGGGTCCAAGTGGGCCCCAAGGAATCGCTGCTCACATTATGCTTTCTTGAATAGTGACACTCG*ATACCAACCACCGCACTACTGCTCCTAACAATAGGAACACCATAGGAAAGTTCTTGTGGGGTGTAGATAAGTTTGAAGGTATAGACAAGCTCATCATTAGTCACCGTT*ACTATACTACCACATCCATGCAGTTCAGACTCAAAGATAAGCACTTGAGCAGAAGGGTCTTCTCCAGTTGCALL gi|6438158|gb|AU081453.1|AU081453 ACGAATGCACTGATGCTTCAAGATTTATAATATCACCCAGGAAGTATTGGTTAGAAGGTCTCTCGAATCTCCAGTCATCAGTCATGAGTTTGAGGGAGAAGACAAAGATCTCCTCTGCAACTTCAGTAGAGGTATATGGGGTCCAAGTGGGCCCCAAGGAATCGCTGCTCACATTATGCTTTCTTGAATAGTGACACTCG*ATACCAACCACCGCACTACTGCTCCTAACAATAGGAACACCATAGGAAAGTTCTTGTGGGGTGTAGATAAGTTTGAAGGTATAGACAAGCTCATCATTAGTCACCGTT*ACTATACTGCCACATCCATGCAGTTCAGACTCAAAGATAAGCACTTGAGTAGAAGGGTCTTCTCCAGTTGCALL gi|6438126|gb|AU081421.1|AU081421 AGGAAGTATTGGTTAGAAGGTCTCTCGAATCTCCNGTCATCAGTCATGAGTTTGAGGGAGAAGACAANGATCTCCTCTGCAACTTCAGTAGAGGTATATGGGGTCCAAGTGGGCCCCAAGGAATCGCTGCTCACATTATGCTTTCTTGAATAGTGACACTCGGATACCAACCNCCGCACTACTGCTCCTAACAATAGGAACACCATAGGAAAGTTCTTGTGGGGTGTAGATAAGTTTGAAGGTATAGACAAGCTCATCATTAGTCACCGTT*ACTATACTGCCACATCCATGCAGTTCAGACTCAAAGATAAGCACTTGAGCAGAAGGGTCTTCTCCAGTTGCALL gi|6438170|gb|AU081465.1|AU081465 LLTGGTTAGAAGGTCTCTCGAATTGCCAGTCATCAGTCATGAGCCTGAGGGAGAACACAAAGATCTCCTCTGCAGCTTTAGAAGCGGCATATGGGATCCAATTGGGCATTAAGGCATCGCTACTCACATTATGCTCTCTTGAATAGTGACACTCG*ATACCAACCACTGCACTACTGCTCCTAACAATAGGAACACCAAATAAAACCTCTTGTGGGGTGTAGATGATGGAGAACGTATAGATGAGTTCATCCTCAGTCACCAACGAC*ATGCTGCCACATCCATGCAGTTCTGACTCAAAGATGAGCACTTGAGCAGAAGGACCCTCTCCAGTTGCAATACAACCTCCCAGTGTAAAAGCAGAGGGCATTAGTAGTTGTCCAGTGCCAAAGAAGTCTTTCAACACTTCCACATATATTG Putative SNPs: 124T>C 27. 100 200 300 400 500 600 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+..... Cyprinus_Cluster7990.seq.Contig1 CGGCCGCCGGGAGACAA*CTGAAAGAGAAGTGTGCATTACAGTCACCGACAGGGTCAGGGCTTGTCTGCGTTCACGCGTTTGACTGCCACATCATTTTTTTAGACGCTGAATGTAAGAT*TTCCTTTGACATCCCGGCATGGGTAATGTTAGTTTTTATGTAGGCAGCTGGCTAGCTCTCAGGTTAGCTCACACATTGAGAAAGAGAGCGAGATATAAAGGGCGCTAGTTACTCAGGAGCCACTAACGTTACACCCAGCGGGAAGATGGCGCTTAAACGAATCAATAAGGAACTGAATGATTTGGCACGTGATCCTCCTGCACAGTGCTCTGCAGGTCCAGTGGGGGATGATGTGTTCCACTGGCAGGCCACAATCATGGGGCCGAATGAAAGTCCATATCAGGGTGGTGTTTTTTTCCTAACCATACACTTCCCAACAGATTACCCCTTTAAACCACCAAAGGTTGCATTTACTACAAGAATCTACCATCCCAACATAAACAGTAATGGCAGCATCTGTCTGGATATCCTCAGGTCCCAGTGGTCTCCTGCACTTACTATTTCTAAAGTTCTCCTGTCCATCTGCTCACTCTTATGTGACCCCAATCCAGACGA --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|50738385|gb|CA965135.2|CA965135 CGGCCGCCGGGAGACAA*CTGAAAGAGAAGTGTGCATTACAGTCACCGACAGGGTCAGGGCTTGTCTGCATTCACGCGTTTGACTGCCACATCATTTTTTTAGACGCTGAATGTAAGAT*TTCCTTTGACATCCCGGCATTTTTAATGTTAGTTTTTATGTAGGCAGCTGG*TATCTCTCAGGTTAGCTCACACATTGAGAAAGAGAGCGAGATATAAAGGGCGCTAGTTACTCAGGAGCCACTAACGTTACACCCAGCGGGAAGATGGCGCTTAAACGAATCAATAAGGAACTGAATGATTTGGCACGTGATCCTCCTGCACAGTGCTCTGCAGGTCCAGTGGGGGATGATGTGTTCCACTGGCAGGCCACAATCATGGGGCCGAATGAAAGTCCATATCAGGGTGGTGTTTTTTTCCTAACCATACACTTCCCAACAGATTACCCCTTTAAACCACCAAAGGTTGCATTTACTACAAGAATCTACCATCCCAACATAA*CAGTAATGGCAGCATCTGTCTGGATATCCTCAGGTCCCAGTGGTCTCCTGCACTTACTATTTCT gi|50733397|gb|CA967573.2|CA967573 LLLLLLLLLLLAGACAAACTGAGAGAGAAGTGTGCATTACAGTCACCGACAGGGTCAGGGCTTGTCTGCGTTCACGCGTTTGACTGCCACATCATTTTTTTAGACGCTGAATGTAAGAT*TTCCTTTGACATCCCGGCATTT*TAATGTTAGTTTTTATGTAGGCAGCTGG*TATCTCTCAGGTTAGCTCACACATTGAGAAAGAGAGCGAGATATAAAGGGCGCTA****CTCAGGAGCCACTAACGTTACACCCAGCGGGAAGATGGCGCTTAAACGAATCAATAAGGAACTGAATGATTTGGCACGTGATCCTCCTGCACAGTGCTCTGCAGGTCCAGTGGGGGATGATGTGTTCCACTGGCAGGCCACAATCATGGGGCCGAATGAAAGTCCATATCAGGGTGGTGTTTTTTTCCTAACCATACACTTCCCAACAGATTACCCCTTTAAACCACCAAAGGTTGCATTTACTACAAGAATCTACCATCCCAACATAAACAGTAATGGCAGCATCTGTCTGGATATCCTCAGGTCCCAGTGGTCTCCTGCACTTACTATTTCTAAAGTTCTCCTGTCCATCTGCTCACTCTTATGTGACCCCAATCCAGACGA gi|50740024|gb|CA966540.2|CA966540 AA*CTGAAAGAGAAGTGTGCATTACAGTCACCGACAGGGTCAGGGCTTGTCTGCGTTCACGCGTTTGACTGCCACATCATTTTTTTAGACGCTGAATGTAAGAT*TTCCTTTGACATCCCGGCATGGGTAATGTTAGTTTTTATGTAGGCAGCTGG*TAGCTCTCAGGTTAGCTCACACATTGAGAAAGAGAGCGAGATATAAAGGGCGCTAGTTACTCAGGAGCCACTAACGTTACACCCAGCGGGAAGATGGCGCTTAAACGAATCAATAAGGAACTGAATGATTTGGCACGTGATCCTCCTGCACAGTGCTCTGC gi|50733883|gb|CA967840.2|CA967840 LGGCCTGTCTGTATTCACACTTTTGATTGCCATATCATTTTTTTTGACTTTGAACGTAAGATGTTTCTT*GACATCCTGACATCTGTAATGTTACTTTCTATTTAGGAAGCTGGCTAGCTCTCAGGTTAGCTCACATTTTGAGAAAGAG**CGGGATTTA**GGGCGCTAGTTACTCAGGAGCCACTA******CACCCAGTGCGAAGATGGCGCTTAAACGAATCCATAAGGAATTGAATGATTTGGCACGTGATCCTCCTGCACAGTGTTCAGCAGGTCCAGTGGGGGATGATGTGTTCCACTGGCAGGCAACAATCATGGGGCCGAATGAAAGTCCATATCAGGGTGGCGTTTTTTTCCTAACCATACACTTCCCAACAGATTACCCCTTCAAACCACCAAA Putative SNPs:70A>G, 175T>G 28. 100 200 300 400 500 600 700 800 900 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|. Cyprinus_Cluster7992.seq.Contig1 CAAGCTCCTAAGGAAATGGCCGTGCGCTTTCTGTCCGTAACGAGAAGATATCCCGTCGATTTGTGCAGGTTAACGGCAAGTGCAGTGAACAGGTCCGTCGTAGGCCTCTTCAGCACTGCAGCAGAACATCATAGTGCTGGGGATGACTGCCATGGTGACGATGGAGATGAAGACCACAGTCACTCTATGACACATGTCAGGACCTTAGAGACGAGAGCTAGAAAACTGGAAGAGCAGGTTCACGACCTCACAGAGAGATACAAACGAGCCCTAGCTGACTCAGACAATGTCAGAAGAAGAACACAGAAATTTGTTGAGGACGCCAAACTATTTGGGATTCAGAGTTTCTGCCGTGACATTGTGGAGGTGGCAGACCTGTTGGAGAAGGTTGAGGAGGGAGATGGAGCACAGCAGCTGACACAATACATGGCACACATACAGGGACGGCTGCAGGACATCTTCACCAAGCATGGACTGGAGAAGATGAGCCCCGTGGGATCCACCTACGACCCATATCAGCATGAAATAGTCTGTCATACTCCAGCAGAGGGAGTGGAGCCTGGCTCCATAGCTGTGGTGAAGCAAGACGGTTACATGCTGCATGGACGTACCATTCGTCATGCCCTTGTGGGCATAGCTGTGAAGACGCAGGAGCAGTGACAGCGCCTTAGTTCAGTCCTCTCATGCTTAGGTTTTTTTTTTTACACTCTCTCTCTTAGAGTGTATTGTTCTTGCATCTCTAGACAACTACATTTTTGACTTACTCTTTGAAGTAA*TGGTTATTTATATGTTTTTATAATTTGTGTAATCTACACAGATTAATCAGGCTTTTTTTTTTTTGTCTTTTTTTGTTTAGTTTTGAACCCCCGATTTTCAGACTGTCCAATGCCCGTTTAATGT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|50743150|gb|CF660962.2|CF660962 CAAGCTCCTAAGGAAATGGCCGTGCGCTTTCTGTCCGTAACGAGAAGATATCCCGTCGATTTGTGCAGGTTAACGGCAAGTGCAGTGAACAGGTCCGTCGTAGGCCTCTTCAGCACTGCAGCAGAACATCATAGTGCTGGGGATGACTGCCATGGTGACGATGGAGATGAAGACCACAGTCACTCTATGACACATGTCAGGACCTTAGAGATGAGAGCTAGAAAACTGGAAGAGCAGGTTCACGACCTCACAGAGAGATACAAACGAGCCCTAGCTGACTCAGACAATGTCAGAAGAAGAACACAGAAATTTGTTGAGGACGCCAAACTATTTGGGATTCAGAGTTTCTGCCGTGACATTGTGGAGGTGGCAGACCTGTTGGAGAAGGTTGAGGAGGGAGATGGAGCACAGCAGCTGACACAATACATGGCACACATACAGGGACGGCTGCAGGACATCTTCACCAAGCATGGACTGGAGAAGATGAGCCCTGTGGGATCCACCTACGACCCATATCAGCATGAAATAGTCTGTCATACCCCAGCAGAGGGAGTGGAGCCTGGCTCCATAGCTGTGGTGAAGCAAGACGGTTACATGCTGCATGGACGTACCATTCGTCATGCCCTTGTGGGCATAGCTGTGAAGACGCAGGAGCAGTGACAGCGCCTTAGTTCAGTCCTCTCATGCTTAGGTTTTTTTTTTTACACTCTCTCTCTTAGAGTGTATTGTTCTTGCATCTCTAGACAACTACATTTTTGACTTACTCTTTGAAGTAA*TGGTTATTTATATGTTTTTATAATTTGTGTAATCTACACAGATTAATCAGGCTTTTTTTTTTTTGTCTTTTTTTGTTTAGTTTTGAACCCCCGATTTTCAGACTGTCCAATGCCCGTTTAATGT gi|50739962|gb|CA966478.2|CA966478 AGCTCCTGAGGAAATGGCCGTGCGCTTTCTGTCCGTAACGAGAAGATATCCCGTCGATTTGTGCAGGTTAACGCCAAGTGCAGTCAACAGGTCTGTCGTAGGCCTCTTCAGCACTGCAGCAGAACATCATAGTGCTGGGGATGACTGCCATGGTGACGATGGAGATGAAGACCACAGTCACTCTATGACACATGTCAGGACCTTAGAGACGAGAGCTAGAAAACTGGAAGAGCAGGTTCACGACCTCACAGAGAGATACAAACGAGCCCTAGCTGACTCAGACAATGTCAGAAGAAGAACACAGAAATTTGTTGAGGACGCCAAACTATTTGGGATTCAGAGTTTCTGCCGTGACATTGTGGAGGTGGCAGACCTGTTGGAGAAGGTTGAGGAGGGAGATGGAGCACAGCAGCTGACACAATACATGGCACACATACAGGGACGGCTGCAGGACATCTTCACCAAGCATGGACTGGAGAAGATGAGCCCCGTGGGATCCACCTACGACCCATATCAGCATGAAATAGTCTGTCATACTCCAGCAGAGGGAGTGGAGCCTGGCTCCATAGCTGTGGTGAAACAAGACGGTTACATGCTGCATGGACGTACCATTCGTCATGCCCTTGTGGGCATAGCTGTG gi|50739922|gb|CA966438.2|CA966438 LLLLLLCAGCACTGCAGCGGAACATCGTAGTGCTGGTGACGACTGCCATGGTGATGATGGAGATGATGACCACAGTCACTCTGTGACACATGTCAGGGCCTTGGAGATAAGAGCTAGAAAACTGGAAGAGAAGGGTCGCGACCTCACTGAGAGATATAAACGAGCCCTAGCTGACACAGACAATGTCAGAAGAAGAACACAGAAATTTGTAGAGGACGCCAAAATATTTGGCATTCAGAGTTTCTGCCGTGACATTGTGGAAGTGGCAGACCTGTTGGAGAAGGTTGAGGAGAGAGATGGAGTACAGCAGCTAACACAATACCTGGCTCTTTTACAGGGACGGCGGGGGGAGGTCTTCACCAAACATGGACTGGAGAAGATGAGCCCCGTGGGATCTGCCTACGACCCATATCAGCATGAAATAGTCTGTCATACTCCAGCAGAGGGAGTGGAGCCCANCACCATAGCAGTGGTGAAGCAAGACGGTTACATGCTCCATGGACGTACCATTCGCCATGCCCTTGTGGGTATAGCTGTG gi|109280507|gb|EC392795.1|EC392795 LLLGCTGGGGATGACTGCCATGGTGACGATGGAGATGAAGACCACAGTCACTCTATGACACATGTCAGGACCTTAGAGACGAGAGCTAGAAAACTGGAAGAGCAGGTTCACGACCTCACAGAGAGATACAAACGAGCCCTAGCTGACTCAGACAATGTCAGAAGAAGAACACAGAAATTTGTTGAGGACGCCAAACTATTTGGGATTCAGAGTTTCTGCCGTGACATTGTGGAGGTGGCAGACCTGTTGGAGAAGGTTGAGGAGGGAGATGGAGCACAGCAGCTGACACAATACATGGCACACATACAGGGACGGCTGCAGGACATCTTCACCAAGCATGGACTGGAGAAGATGAGCCCCGTGGGATCCACCTACGACCCATATCAGCATGAAATAGTCTGTCATACTCCAGCAGAGGGAGTGGAGCCTGGCTCCATAGCTGTGGTGAAGCAAGACGGTTACATGCTGCATGGACGTACCATTCGTCATGCCCTTGTGGGCATAGCTGTGAAGACGCAGGAGCAGTGACAGCGCCTTAGTTCAGTCCTCTCATGCTTAGGGTTTTTTTAC*ACTCTCTCTCTCTTAGTGTGTATTGTTCTTACATCTCTAGACAACTACATTTTTGACTTACTCTTTGAAGTAAATGGT*ATTTATATGTATTTATAATTTGTGTAATCTACACAGATTAATCAGGCTTTTTTTTTT**GTCTTTTTT*GTTTAGTTTTGAACCCCCGATTTACAGACT Putative SNPs: 212T>C 29. 100 200 300 400 500 600 700 800 900 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.. Cyprinus_Cluster8000.seq.Contig1 GCCGCGGGGACTCTTGACAGCTCTACAACACATAGTGCCTAAGAGAAAGTCTAAACATGAATGCTGTGATGGACACATTGCACGGGTTTGGAGTGAGTAGCACCCAATACCTGCAGACCCATTACAAAGATGCCCAAGGATGGTTTCTTTTCGTATCCTTTGCGGCAGATCTGAGGAACACCTTCATCATCTTCTTTCCCATCTGGTTCCATCTGAAAGAATCAGTCGGGATCAAGCTCATCTGGGTGGCTGTGATAGGAGACTGGCTCAATCTGGTCTTCAAATGGATC*CTGTTTGGAGAACG*TCCATACTGGTGGGTCCATGAGACTTCTTACTACATCAACAGCTCAACGCCACATATTGAGCAGTATC*CCATGACCTGTGAGACCGGCCCAGGAAGCCCATCTGGTCATGCTATGGGGGCTGCTGGTGTTTACTACACATTGGTCACTTCAATCCTTGCCATAATGCTAAGCAAAGAGAAGAAAACCTCGTCTAAGGGCCTATACTTGCGTGGTTCACTTTGGACGCTCTTCTGGATGGTCCAGGTCTGTGTTTGTCTCTCTCGAGTCTTCATCGCCGCTCATTTCCCACATCAAGTTTTCGCAGGAGTTATTTCAGGCATGGTTGTTGCCGAGGCCTTCAACGGACAGAAATGGATCTACAGTGCCAGTCTAAAGAATTACTTCAACATCACACTGTTCCTGCTCTCTTTTGCGGTGGCCTTGTACCTGTTTCTCAAGCTCTGGGGTGTGGATCTGCTGTGGACCTTTGAGAAGCCCAGCGGTGGTGCGTCAATCCAGCCTGGGTCCACTTGGACACAACGCCGTTCGCCAGCCTGTTGAGGAACATGGGCACCCTGTTTGGTCTGGGACTCGGCCTTCACTCTCCGCTGTACACTGAAAGCAA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ gi|50742354|gb|CF663095.2|CF663095 GCCGCGGGGACTCTTGACAGCTCTATA*C*CATAGTGCCTTAGAGAAAGTCTAAACATGAATGCTGTGATGGACACATTGCACGGGTTTGGAGTGAGTAGCACCCAATACCTGCAGACCCATTACAAAGATGCCCAAGGATGGTTTCTTTTCGTATCCTTTGCGGCAGATCTGAGGAACACCTTCATCATCTTCTTTCCCATCTGGTTCCATCTGAAAGAATCAGTCGGGATCAAGCTCATCTGGGTGGCTGTGATAGGAGACTGGCTCAATCTGGTCTTCAAATGGATC*CTGTTTGGAGAACG*TCCATACTGGTGGGTCCATGAGACTTCTTACTACATCAACAGCTCAACGCCACATATTGAGCAGTATC*CCATGACCTGTGAGACCGGCCCAGGAAGCCCATCTGGTCATGCTATGGGGGCTGCTGGTGTTTACTACACATTGGTCACTTCAATCCTTGCCATAATGCTAAGCAAAGAGAAGAAAACCTCGTCTAAGGGCCTATACTTGCGTGGTTCACTTTGGACGCTCTTCTGGATGGTCCAGGTCTGTGTTTGTCTCTCTCGAGTCTTCATCGCCGCTCATTTCCCACATCAAGTTTTCGCAGGAGTTATTTCAGGCATGGTTGTTGCCGAGGCCTTCAACGGACAGAAATGGATCTACAGTGCCAGTCTAAAGAATTACTTCAACATCACACTGTTCCTGCTCTCTTTTGCGGTGGCCTTGTACCTGTTTCTCAAGCTC gi|50741323|gb|CF662432.2|CF662432 GACAGCTCTACAACACATAGTGCCTAAGAGAAAGTCTAAACATGAATGCTATGATGGACACATTGCACGGGTTTGGAGTGAGTAGCACCCAATACCTGCAGACCCATTACAAAGACGCCCAAGGATGGTTTCTTTTCGTATCCTTTGTGGCAGATCTGAGGAACACCTTCTTCATCTTCTTTCCCATCTGGTTCCATCTGAAAGAATCAGTCGGGATCAAGCTCATCTGGGTGGCTGTGATAGGAGACTGGCTCAATCTGGTCTTCAAATGGATC*CTATTTGGAGAACG*TCCATACTGGTGGGTCCATGAGACTTCCTACTACATCAACAGCTCAACGCCACATATTGAGCAGTATC*CCATGACCTGTGAGACCGGTCCAGGAAGCCCGTCTGGTCACGCTATGGGGGCTGCTGGTGTTTACTACACATTGGTCACCTCAATCCTCGCCATAATGCTGAGCAAAGAGAAGAAATCCTCATCTAAGAGCCTATACTTGCGTGGTTCACTTTGGACACTCTTCTGGACGGTCCAGGTCTGTGTTTGTCTCTCTCGGGTCTTCATCGCCGCTCATTTCCCCCATCAAGTTTTCGCAGGAGTTATTTCAGGCATGATTGTTGCCGAGGCCTTCAACAGACAGAAATGGATCTACAGTGCCACTCTGAAGAATTACTTCAACATCACTCTGTTCCTGCTCTCTTTTGCGGTGGGCTTGTACCTGCTCCTCAAGCTCTGGGGTGTGGATCTGCTGTGGACCTTTGAGAAGCCCAGCGGTGGTGCGTCAATCCAGCCTGGGTCCACTTGGACACAACGCCGTTCGCCAGCCTGTTGAGGAACATGGGCACCCTGTTTGGTCTGGGACTCGGCCTTCACTCTCCGCTGTACACTGAAAGCAA gi|50734709|gb|CA968534.2|CA968534 LLLLLLLCTAAACATGAATGCTGTGATGGACACATTGCACGGGTTTGGAGTGATTACCACCCCATACCTGCAGACCCATTACAA*GAGGGGCG*GGAGGGTTTCTTTTCTTATCCTTTGCGGCAGATCTGAGGAACACCTTCTTCATCTTCTTTCCCATCTGGTTCCATCTGAAAAAAACACTCGGGATCAACCTCATCTGGGTGGCTGTGATAAAAAACAGGCTCAATCTGGTCTTCAAATGGATC*CTGTTTG gi|50743273|gb|CF661076.2|CF661076 ACCCATTACAAAGATGCCCTCGGATGGTTTCTTTACCTCTCCTTTGCGGCTCATCTGAAGAACACCTTCATCATCTTCTTTCCCATCTGGTTCCATCTGAAAGAATCAGTCGGGATCTACCTCATCTGGGTGGCTGTGATAGGAGACTGGCTCAATCTGGTCTTCTAATGGATATCTGTTTGGAGAACTCTACCTACTGGTGGGTCCATGAGACTTCTTACTACATCAACAGTTCTACGCCACATATTGAGCAGTATCTCCTTGACCTGTGAGACCGGCCCAGGAAACCTATCTCGTCATGCTCTGGGGGCTGCTGGTGTTTACTACACATTGGACACTTCAATCCTTGCCCTACTGCTAAGCATACAGAATACAACCTCGTCTAAAGGCCTATCCGTCTGTGGTTCACTTTGCACGCTCTTCTGGATGGTCCAGGTCTGTGTTTGTCTCTCTCGACTCTTCATCGTCGCTCATTTCCCAATTCAAGTTTTCTCACGATTTACTTCACGCATGGTTGTTGCCGATGCCTTCAACGGACACAAATGGATCTACAGTGCCAGTCTAAAGAATTACTTCAACATCACACTGT Putative SNPs: 186A>T, 236G>C 30. 100 200 300 400 500 600 700 800 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.... Cyprinus_Cluster8001.seq.Contig1 ACTTATGGAGTTGGACACATCAACCCGGCACACACCATCAGTGCCGCCCTCTGCTATGCTACACAGCTCATCAATATCCTGTCTCATATTCTTGATGTCAACCTTCCGAAAAAATTG*TGCAACAGTGAGTTCTGCGGTGATAATCTGACCCGCTACCGATTCACCC*GTGCCGTAAACAAACTTAACACCAACATCCTGCACCTCTGCTT*CTCACAGCATGTTGACAGCGAGCTGCTT*CATCCTCATCACACTTTGAGGAA*TATAATATTTCTGGTGTCTCCAGCAAACAAGAAACTTGGCAGAACCGGGCCGTTTGAGGTGAG*CGCTGACTT*GGAAGACTCTATGGAGTTTGTGGAACCAGAGGCGGCTGGACCAGCGGAGGAGAGCGGAGAGGAGGCTGTGACGGATGAAGAAACAGACTTGGGCATAGACTGGGAGACGGTTCCAAGCCCTCGCTTCTGTGACATCCCTTCCCAGCCTATGGATCTGTCCCAGAGCGGCATGCACGCATCCCAGCCAATTGGCAATGCAGGGGGCATGATCTCCTCTGCGGCTGCCTCTGTCACGTCCTGGTTCCGCACCTATACCGGGCAGCGCTGAGATCCGGTGGATGTGGGGG*TGGTTCAACCGGTTAGACCTATGCAAACACCCCATTACTGTCATTCTCACTTATGTCAGCTTGGCCATTGGGAGAAATAAAGGGAAGTTTCATCTGACTGCTCATACTGAATAAATGTGTGGTTTTATTGCAGGACGGAAGAGTGTAATGAACTACTTTTGCAGCTCACTTTTTACTGTAGACACCACACACCAGTCAACTTTATCCAGTGTACATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|50743074|gb|CF660891.2|CF660891 ACTTATGGAGTTGGACACATCAACCCGGCACACACCATCAGTGCCGCCCTCTGCTATGCTACACAGCTCATCAATATCCTGTCTCATATTCTTGATGTCAACCTTCCGAAAAAATTG*TGCAACAGTGAGTTCTGCGGTGATAATCTGACCCGCTACCGATTCACCC*GTGCCGTAAACAAACTTAACACCAACATCCTGCACCTCTGCTT*CTCACAGCATGTTGACAGCGAGCTGCTT*CATCCTCATCACACTTTGAGGAA*TATAATATTTCTGGTGTCTCCAGCAAACAAGAAACTTGGCAGAACCGGGCCGTTTGAGGTGAG*CGCTGACTT*GGAAGACTCTATGGAGTTTGTGGAACCAGAGGCGGCTGGACCAGCGGAGGAGAGCGGAGAGGAGGCTGTGACGGATGAAGAAACAGACTTGGGCATAGACTGGGAGACGGTTCCAAGCCCTCGCTTCTGTGACATCCCTTCCCAGCCTATGGATCTGTCCCAGAGCGGCATGCAGGCATCCCAGCCAATTGGCAATGCAGGGGGCATGATCTCCTCTGCGGCTGCCTCTGTCACGTCCTGGTTCCGCACCTATACCGGGCAGCGCTGAGATCCGGTGGATGTGGGGGGTGGTTCAACCGGTTAGACCTATGCAAACACCCCATTACTGTCATTCTCACTTATGTCAGCTTGGCCGTTGGGAGAAATAAAGGGAAGTTTCATCTGACTGCTCATACTGAATAAATGTGTGGTTTTATTGCAGGACGGAAGAGTGTAATGAACTACTTTTGCAGCTCACTTTTTACTGTAGACACCACACACCAGTCAACTTTATCCAGTGTACATT gi|50742816|gb|CF660688.2|CF660688 AACCCGGCACACACCATCAGTGCCGCCCTCTGCTATGCTACACAGCTTATCAATATCCTGTCTCATATTCTTGAAGTCAACCTTCCGAAAAAATTG*TGCAACAGTGAGTTCTGTGGTGATAATCTGACCCGCTACCGATTCACCC*GTGCTGTAAACAAACTTAACACCAACATCCTGCACCTCTGCTTTCTCACAGCATGTTGACAGCGAGCTGCTTTCATCCTCATCACACTTTGAGGAAATATAATATTTCTGGTGTCTCCAGCAAACAAGAAACTTGGCAGTACCGGGCCGTTTGAGGTGAGTCGCTGACTTTGGAAAACTCTATGGAGTTTGTGGAALLL gi|50743889|gb|CF661624.2|CF661624 AGCTCATCAATATCCTGTCTCATATTCTTGCCGTCAACCTTCCGAAAAAATTGATGCAACAGTGAGTTCTGTGGTGATAATCTGACCCGCTACCGATTCACCCTGTGCTGTAAACAAACTTAACACCAACATCCTGCACCTCTGCTT*CTCACAGCATGTTGACAGCGAGCTGCTT*CATCCTCATCACACTTTGAGGAA*TATAATATTTCTGGTGTCTCCAGCAAACAAGAAACTTGGCAGAACCGGGCCGTTTGAGGTGAG*TGCTGACTT*GGAAGACTCTATGGAGTTTGTGGAACCATAGGCGGCTGGACCAGCGGAGGAGAGCGGAGAGGAGGCTGTGACGGATGAAGAAACACACTTGGGCATAGACTGGGAGACGGTTCCAAGCCCTCGCTTCTGTGACATCCCTTCCCAGCCTATGGATCTGTCCCAGAGCGGCATGCACGCATCCCAGCCAATTGGCAATGCAGGGGGCATGATCTCCTCTGCGGCTGCCTCTGTCACGTCCTGGTTCCGCACCTATACCGGGCAGCGCTGAGATCCGGTGGATGTGGGGG*TGGTTCAACCGGTTAGACCTATGCAAACACCCCTTTACTGTCATTCTCACTTATGTCAGCTTGGCCATTGGGAGAAATAAAGGGAAGTTTCATCTGACTGCTCATACTGAATAAATGTGTGGTTTTAT gi|50743762|gb|CF661513.2|CF661513 ATATTCTTGATGTCAACCTTCCGAAAAAATTG*TGCAACAGTGAGTTCTGCGGTGATAATCTGACCCGCTACCGATTCACCC*GTGCCGTAAACAAACTTATCACCAACATCCTGCACCTCTGCTT*CTCACAGCATGTTGACAGCGAGCTGCTT*CATCCTCATCACACTTTGAGGAA*TATAATATTTCTGGTGTCTCCAGCAAACAAGAAACTTGGCAAAACCGGGCCGTTTGAGGTGAG*CGCTGACTT*GGAAGACTCTATGGAGTTTGTGGAACCAGAGGCGGCTGGACCATCGGAGGAGAGCGGAGAGGAGGCTGTGACGGATGAAGAAACAGACTTGGGCATAGACTGGGAGACGGTTCCAAGCCCTCGCTTCTGTGACATCCCTTCCCAGCCTATGGATCTGTCCCAGAGCGGCATGCACGCATCCCAGCCAATTGGCAATGCAGGGGGCATGATCTCCTCTGCGGCTGCCTCTGTCACGTCCTGGTTCCGCACCTATACCGGGCAGCGCTGAGATCCGGTGGATGTGGGGG*TGGTTCAACCGGTTAGACCTATGCAAACACCCCATTACTGTCATTCTCACTTATGTCAGCTTGGCCATTGGGAGAAATAAAGGGAAGTTTCATCTGACTGCTCATACTGAATAAATGTGTGGTTTTATTG Putative SNPs: 136C>T, 173C>T 31. 100 200 300 400 500 600 700 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.. Cyprinus_Cluster8008.seq.Contig1 CTCCGGGTGTTCCAGCTGTCTCGCTGACATCACAGGAAGCTCCGAGACAAATCTGATCTGATGAGGGCTGTGCCTTTGCCTTAAACTAGATATATATCATTTTATTTAGACAGTTTGCTGTGTGAGTTGTGTCTGTACTGG**TCCTCGTTATCTTCTTAAGCTCGCTG*AGGATGGCTGAGCCAAGTGGGAGATATCAGCAGCTGCCCAGTGAAGAGGAGCCGGAGGAGGGAGCTCAGGTGGCCAGTGACCCTCCGCCCCCTTACAGTAGTATTGCAGCTGACAGCGGGGTCTTCTCAAGATATTTTGATTACAAAGACGATGCAGCATTTCCCAAGCCCCCATCTTACAACGTAGCCACATCTCTACCGTCGTACGATGAGGCTGAGAGAAACAAAGCAGAGGCGACTATCCCACTGGTGTCAGGGCAAGATGATGACTTTGTGGCCAGAGATGACTTTGAGGATGCTGACCAGCTGCAGATAGGCAATGACGGCATTTTCATGTTGACATGTTTCATGGCATTCCTCTTTAACTGGATTGGCTTCTTTCTATCATTCTGCCTTACAACCTCAGCAGCGGGGCGTTATGGCGCCATATCTGGGTTTGGTCTGTCCCTCATCAAATGGATTCTCATTGTACGGTTTTCTGCTTATTTCCCTGGTTATTTTGATGGACAGTACTGGTTGTGGTGGGTGTTCCTGGTGCTCGGCATCCTGCTC -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|50738245|gb|CA965046.2|CA965046 CTCCGGGTGTTCCAGCTGTCTCGCTGACATCACAGGAAGCTCCGAGACAAATCTGATCTGATGAGGGCTGTGCCTTTGCCTTAAACTAGATATATATCATTTTATTTAGACAGTTTGCTGTGTGAGTTGTGTCTGTACTGG**TCCTCGTTATCTTCTTAAGCTCGCTG*AGGATGGCTGAGCCAAGTGGGAGATATCAGCAGCTGCCCAGTGAAGAGGAGCCGGAGGAGGGAGCTCAGGTGGCCAGTGACCCTCCGCCCCCTTACAGTAGTATTGCAGCTGACAGCG*********CAGGTTATTTTGATTACAAAGACGATGCAGCATTTCCCAAGCCCCCATCTTACAACGTAGCCACATCTCTACCGTCGTACGATGAGGCTGAGAGAACCAAAGCAGAGGCGACTATCCCACTGGTGTCAGGGCAAGATGATGACTTTGTGGCCAGAGATGACTTTGAGGATGCTGACCAGCTGCAGATAGGCAATGACGGCATTTTCATGTTGACATGTTTCATGGCATTCCTCTTCAACTGGATTGGCTTCTTTCTATCATTCTGCCTTACAACCTCAGCAGCGGGGCGTTATGGCGCCATATCTGGGTTTGGTCTGTCCCTCATCAAATGGATTCTCATCGTACGGTTTTCTGCTTATTTCCCTGGTTACTTTGATGGACAGTACTGGTTGTGGTGGGTGTTCCTGGTGC gi|50739267|gb|CA965781.2|CA965781 LLLAATCTGATCTGATGAGGGCTGTGCCTTTGCCATTAACTAAATAT*T*TCATTTTATTTAGACAGTTTGCTGCCTGAATTGTGTCTATACTGGGATCCTCGTTATCTTTTTAAGCTGGGGGGAGGATGGCTAAGCCAANTGGGAGATATCAGCAGCTGCCCAATGAAGAGGAGCCAGAGGAGGGACCTCAGGTGGCCAGTGATCCTCCGCCCCCTTACAGTAGCATTGCAGCTGATAACG*********CAGCATATTTTGATTACAAAGACGATGCAGCATTTCCCAAGCCCCCATCCTATAATGTAGCCACATCTL gi|50734417|gb|CA968267.2|CA968267 GATGAGGGCTGCGCCTTTGCCTTAAACTAGATATATATCATTTTATTTAGACAGTTTGCTGTGTGAGTTGTGTCTGTACTGG**TCCTCGTTATCTTCTTAAGCTCGCTG*AGGATGGCTGAGCCAAGTGGGAGATATCAGCAGCTGCCCAGTGAAGAGGAGCCGGAGGAGGGAGCTCAGGTGGCCAGTGACCCTCCGCCCCCTTACAGTAGTATTGCAGCTGACAGCG*********CAGCATATTTTGATTACAAAGACGATGCAGCATTTCCCAAGCCCCCATCTTACAACGTAGCCACATCTCTACCGTCGTACGATGAGGCTGAGAGAAACAAAGCAGAGGCGACTATCCCACTGGTGTCAGGGCAAGATGATGACTTTGTGGCCAGAGATGACTTTGAGGATGCTGACCAGCTGCAGATAGGCAATGACGGCATTTTCATGTTGACATGTTTCATGGCATTCCTCTTTAACTGGATTGGCTTCTTTCTATCATTCTGCCTTACAACCTCAGCAGCGGGGCGTTATGGCGCCATATCTGGGTTTGGTCTGTCCCTCATCAAATGGATTCTCATTGTACGGTTTTCTGCTTATTTCCCTGGTTATTTTGATGGACAGTACTGGTTGTGGTGGGTGTTCCTGGTGCTCGGCATCCTGCTC gi|50739320|gb|CA965835.2|CA965835 GAGCCGGAGGAGGGAGCTCAGGTGGCCAGTGACCCTCCGCCCCCTTACAGTAACATTGCAGCTGACAGCGGGGTCTTCTCAAGATATTTTGATTATAAAGACGATGCAGCATTTCCCAAGCCCCCATCTTACAACGTAGCCACATCTCTACCATCGTACGAAGAGGCTGAGAGAAACAAAACAGAGGCGACTATCCCACTGGTGT Putative SNPs: 272T>C, 301G>C 32. 100 200 300 400 500 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+........ Cyprinus_Cluster8009.seq.Contig1 AACGACGGGGGGAGAAACACCAACGGAAACGAAG*ATTTC*TGCTGTGAACCTAACCGGGAAGAAAGTGTGAAGAATGGAGATGATGGTGTTTTTGGCAG*CTCTTCTGCCTGTTTTATTGGGCTGTGATTGCGGTCATGATGT*AGACAAACCGGTTGACTGCTCTGATGTTTATAAATCAGGAGAAAACGTCAGTGGGATTTATC*CCATCTATCCAGCAGGTGATGTTCCTGTCTGGGTTTACTGTCAGATGATCTCAGATGGGAAAGATGAAGACAAAGGAGGATGGACGGTGATTCAGAGGAGAATGGACGGCAGTGTGAATTTCTATCGGCCGTGGAATCAGTA*CAGGAGAGGATTTGGGAATGTGGAGAGAGAATACTGGCTGGGGCTGGAGAACATGTACCAGGTGACACGCAACAGGAAGTACATGCTGAGAGTGGATCTGGAGGACTTTGAAGGAAGGAAGGGTTTCGCTCTGTACTCTTCCTTCTCTGTAGATTGTGAGTGTGCTGGATATCAGCTGCATGTTTCAGGATTCACTGATGGAGGAGCAGGCGACTCTTTATCTGGCCATAATGGATA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ gi|89764521|gb|DY691287.1|DY691287 AACGACGGGGGGAGAAACACCAACGGAAACGAAG*ATTTC*TGCTGTGAACCTAACCGGGAAGAAAGTGTGAAAGATGGAGATGATGGTGTTTTTGGCAGACTCTTCTGCCTGTTTTATTGGGCTGTGATTGCGGTCATGATGT*AGACAAACCGGTTGACTGCTCTGATGTTTATAAATCAGGAGAAAACGTCAGTGGGATTTAACTCCATCTATCCAGCAGGTGATGTTCCTGTCTGGGTTTATTGTCAGATGATCTCAGATGGGAAAGATGAAGACAAAGGAGGATGGATGGTGATTCAGAGGAGAATGGACGGCAGTGTGAATTTCTATCGGCCATGGAATCAGTAACAGGAGAGGATTTGGGAATGTGGAGAGAGAATACTGGCTGGGGCTGGAGAACATGTACCAGGTGACACGACACAGGAAGTACTTGCTGAGAGTGGATCTGGAGGACTTTGAAGGAAGGAAGGGTTTCGCTCTGT gi|89500079|gb|DY655875.1|DY655875 LLLLLLLLLLLLLACGAAGTATTTCATGCTGTGATC*TA*CCGGGAAGAAAGTGTGAAGAATGGAGATGATGGTGTTTTTGGCAG*CTCTTCTGCCTGTTTTATTGGGCTGTGATTGCGGTCATGATGT*AGACAAACCGGTTGACTGCTCTGATGTTTATAAATCAGGAGAAAACGTCAGTGGGATTTACT*CCATCTATCCAGCAGGTGATGTTCCTGTCTGGGTTTATTGTCAGATGATCTCAGATGGGAAAGATGAAGACAAAGGAGGATGGATGGTGATTCAGAGGAGAATGGACGGCAGTGTGAATTTCTATCGGCCATGGAATCAGTA*CAGGAGAGGATTTGGGAATGTGGAGAGAGAATACTGGCTGGGGCTGGAGAACATGTACCAGGTGACACGCAACAGGAAGTACATGCTGAGAGTGGATCTGGAGGACTTTGAAGGAAGGAAGGGTTTCGCTCTGT gi|50734829|gb|CA968640.2|CA968640 AACGGAAACGAAG*ATTTC*TGCTGTGATC*TG*CCGGGAAGAAAGTGTGAAGA*TGGAGATGATGGTGTTTTTGGCAG*CTCTTCTGCCTGTTTTATTGGGCTGTGATTGCGGTCATGATGT*AGACAAGCCGGTTGACTGCTCTGATGTTTATAAATCAGGAGAAAACGTCAGTGGGATTTATC*CCATCTATCCAGCAGGTGATGTTCCTGTCTGGGTTTACTGTCAGATGATCTCAGATGGGAAAGATGAAGACAAAGGAGGATGGACGGTGATTCAGAGGAGAATGGACGGCAGTGTGAATTTCTATCGGCCGTGGAATCAGTA*CAAGAGAGGATATGGGAACGTGGAGAGGGAATACTGGCTGGGGCTGGAGAACATGTACCAGGTGACACGCAACAGGAAGTACATGCTGAGAGTGGATCTGGAGGACTTTGAAGGAAGGAAGGGTTTCGCTCTGTACTCTTCCTTCTCTGTAGATTGTGAGTGTGCTGGATATCAGCTGCATGTTTCAGGATTCACTGATGGAGGAGCAGGCGACTCTTTATCTGGCCATAATGGATA gi|50736505|gb|CA970054.2|CA970054 GGAAAAAAGTGTGAA*AATGGAGATGATGGTGTTTTTGGCAC*CTCTTCTCCCTGTTTTATTGGGCTGTGATTCCCCTCATGATATGAGGGGGGC*GGTTGACTGCTCTAATTTTTATAAATCAGGAGAAAACGTCAATGGGATTTATC*CCATCTATCCAGCAGGTGATGTTCCTGTCTGGGTTTACTGTCAAATGATCTCAAATGGAAAAGATGAAGACAAAGGAGGATGGACGGTGATTCACACGAAAATGGACGGCAGTGTGAATTTCTATCGGCCGTGGAATC Putative SNPs: 152A>G, 246T>C, 293T>C, 339A>G 33. 100 200 300 400 500 600 700 800 900 1000 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.... Cyprinus_Cluster8011.seq.Contig1 TTACGGCCGGGGTTCCTGAATTTTGGCGTCATATAACATTGTTGTGGTTTGGAGGGCGGTTAGCTTTTGCTACACAACACTGGCAAAGTTTTACCTCGTTATCGTTCATGTAAGTTAACTAATAAATTCTTCTCGCGATGGGGACAGCGGTGGGATATGCGCTCAGAAAACTTTCTGTTTATGTATCAGCTGTGGCCATGATATTATTTGCGATCGTGAATGTAACCC*TG*TTGAAACTCCTGTCCTTTCGTTTCCCCGGGACTGATGAGGAAAATCCATCTAAAAATGGGAGAGAAGTCGACGATGACTCAAAACCCCAAATTCAGATACGAAGACTGGGGTCCGACTTTCTTTTCTCTGAGGTTCATTAAAACCGTGCTCTCCGTGAACTGGTGCTCGCTGGGCCTGGAGGCGTTTGAGGGGCACGCGGCTCCGGACACAGCTTTATTCACCCTGGATGGACAAAAAACGAGCATTCATCGTTTTCTTAAAGGGAACCGTCCACTGGTTCTGAGTTTCGGAAGCTGCACCTGACCCCCATTTCTCTACAAACTTGACGAGTTCAAACAACTTGTCAAGGACTTCAGTGATGTGGCAGATTTCCTTGTTGTATACCTTGCAGAAGCGCATGCAACTGATGCTTGGGCCTTTGCAAACAACGTTGACATCAGCGTGCACAAAAACTTGGAGGAGAGACTGGCTGCGGCCCGGACCCTGGTCAAAGAGGACCCCCTCTGCCCTGTGGTAGTGGATGAGATGACCAACATCACTGTCAGCAAATACGGAGCCCTGCCTGAGCGCCTCTATGTCGTTCAGAGTGGGAAAGTTATCTATCAGGGTGGCATTGGACCTTGGGGATACAACCCTGAAGAGGTTCGAAAAGTTCTGGAGAAAACTAATTAAAAGGGAAAAAATTTAAGTTTTCTATCCATGATTGCATTGATATATTTGCACTTTTCTGAAATTCCAGTCCTTGAACTCATTTTCTGAGTCCTTGTGTTTGCTTGTGACAGATACAGATTAAACCAGCTGGTCTCTGTACCTTGATGTTT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|50739556|gb|CA966072.2|CA966072 TTACGGCCGGGGTTCCTGAATTTTGGCGTCATATAACATTGTTGTGGTTTGGAGGGCGGTTAGCTTTTGCTACACAACACTGGCAAAGTTTTACCTCGTTATCGTTCATGTAAGTTAACTAATAAATTCTTCTCGCGATGGGGACCGCAGTGGGATATGCACTGAGAAAACTTTTAGTTTATCTATCAGCTGTCGCCATGATATTATTTGCGATCGCGCATTTGACTC*TG*TTGAAACTCCTGTCAGT*CGTTTTCCCGGGACTGATGAAGAAAATCCATCTTAAAATGGGAGAGAAGTTTACGATGACCCAAAATCCCAAATTCAAATACGAAGACTGGGGTCCGAGTTTCTTTTCTCTGGCGTTCATTAAAACCGTGCTCTCCGTGAACTGGTGCTCGCTGGGCCTGGAAGCGTTTGAGGGCCACGCGGCTCCAGACACAGCTTTATTCACCCTGGACGGACAGAAAACCAGCATTCATCGTTTTCTTAAAGGAAACCGTCCACTGGTTCTGAGTTTCGGAAGCTGCACATGACCCCCATTTCTCTACAAGCTTGATGAGTTCAAACAACTTGTCAAGGATTTCAGTGATGTGGCAGATTCCCTCGTGGTTTACCCCGCAGAGGCGCATGCAACTGATGCTTGGGCCTTTGCAAACAACGT gi|50743645|gb|CA966709.2|CA966709 LLLLLLLLLLLLLLLLLLLLLLLLLLACTGATAAATTCTTCTCGCGATGGGGACAGCGGTGGGATATGCGCTCAGAAAACTTTCTGTTTATGTATCAGCTGTGGCCATGATATTATTTGCGATCGTGAATGTAACCC*TG*TTGAAACTCCTGTCCTT*CGTTTCCCCGGGACTGATGAGGAAAATCCATCTAAAAATGGGAGAGAAGTCGACGATGACTCAAAACCCCAAATTCAGATACGAAGACTGGGGTCCGACTTTCTTTTCTCTGAGGTTCACTAAAACCGTGCTCTCCGTGAACTGGTGCTCGCTGGGCCTGGAGGCGTTTGAGGGGCACGCGGCTCCGGACACAGCTTTATTCACCCTGGATGGACAAAAAACGAGCATTCATCGTTTTCTTAAAGGGAACCGTCCACTGGTTCTGAGTTTCGGAAGCTGCACCTGACCCCCATTTCTCTACAAACTTGACGAGTTCAAACAACTTGTCAAGGACTTCAGTGATGTGGCAGATTTCCTTGTTGTATACCTTGCAGAAGCGCATGCAACTGATGCTTGGGCCTTTGCAAACAACGTTGACATCAGCGTGCACAAAAACTTGGAGGAGAGATTGGCTGCGGCCCGGACCCTGGTCAAAGAGGACCCCCTCTGCCCTGTGGTAGTGGATGAGATGACCAACATCACTGCCAGCAAATACGGAGCCCTGCCTGAGCGCCTCTATGTCGTTCAGAGTGGGAAAGTTATCTATCAGGGTGGCATTGGACCTTGGGGAT gi|50743854|gb|CA967152.2|CA967152 AATTCTTCTC*CGA*GGGGACAGCGGTGGGATATGCGCTCAGAAAACTTTCTGTTTATGTATCAGCTGTGGCCATGATATTATTTGCGATCGTGAATGTAACCC*TG*TTGAAACTCCTGTCCTTTCGTTTCCCCGGGACTGATGAGGAAAATCCATCTAAAAATGGGAGAGAAGTCGACGATGACTCAAAACCCCAAATTCAGATACGAAGACTGGGGTCCGACTTTCTTTTCTCTGAGGTTCATTAAAACCGTGCTCTCCGTGAACTGGTGCTCGCTGGGCCTGGAGGCGTTTGAGGGGCACGCGGCTCCGGACACAGCTTTATTCACCCTGGATGGACAAAAAACGAGCATTCATCGTTTTCTTAAAGGGAACCGTCCACTGGTTCTGAGTTTCGGAAGCTGCACCTGACCCCCATTTCTCTACAAACTTGACGAGTTCAAACAACTTGTCAAGGACTTCAGTGATGTGGCAGATTTCCTTGTTGTATACCTTGCAGAAGCGCATGCAACTGATGCTTGGGCCTTTGCAAACAACGTTGACATCAGCGTGCACAAAAACTTGGAGGAGAGACTGGCTGCGGCCCGGACCCTGGTCAAAGAGGACCCCCTCTGCCCTGTGGTAGTGGATGAGATGACCAACATCACTGTCAGCAAATACGGAGCCCTGCCTGAGCGCCTCTATGTCGTTCAGAGTGGGAAAGTTATCTATCAGGGTGGCATTGGACCTTGGGGATACAACCCTGAAGAGGTTCGAAAAGTTCTGGAGAAAACTAATTAAAAGGGAAAAAATTTAAGTTTTCTATCCATGATTGCATTGATATATTTGCACTTTTCTGAAATTCCAGTCCTTGAACTCATTTTCTGAGTCCTTGTGTTTGCTTGTGACAGATACAGATTAAACCAGCTGGTCTCTGTACCTTGATGTTT gi|50742964|gb|CF660832.2|CF660832 GTGAATGTAACCCATGATTGAAACTCCTGTCCTTTCGTTTCCCCGGGACTGATGAGGAAAATCCATCTTATAATGGGAGATAAGTCTACGATGACTCACAACCCCAAATTCTTATACCAAGACGGGGGTCCGACTTTCTTTTCTCTGATGCTCATTAAAACCGTGCTCTCCGTGAACTGGTGCTCGCTGGGCCTGGATGCGCTTGATGGGTACGCGGCTCCGGACACAGCTTTATTCTCCCTGCATGGACAAGAAACTAGCATACGTCCTTTTCTTAAAGGGAACCGTCCACTGGTTCTGAGTTTCGGAAGCTGCACCTGACCCCCATTTCTCTATCAACTTGACGAGTTCAAACAACTTGTCAAGGACTTCTCTGATGTGGCTCATTTCCTTGTCGTATACCTTGCTTAATCGCATGCGACTGATGCTTGGGCCTTTGCAAACCACGTTGACTTCAACGTGCACTCTTACTTGTACGATAGACTGGCTGCGGCCCCGACCCTGGACCAAGAGGACCCCCTCTGCCCTGTGGTAGTGTATGAGATGACC Putative SNPs: 284T>A, 302T>G 34. 100 200 300 400 500 600 700 800 900 1000 1100 1200 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+....... Cyprinus_Cluster8012.seq.Contig1 TCTTTATTTTGTTTGAACCTCCAAGACTGAAACATCTACAGTTAGTGTTAAAGGTCCAGCCTTACGAAGTTGGTAGGTTGAGCCAATAAGCATCACTTCCATCTTATCACTGTTAAGACAAAGAAAATTTTGAGACATACATATTTTTATCTCAGAAATACAATGTTCCAGGAAAGCAACAGCTGGACAATCACCTGGTTTTGAGTGAATGTACACCTGGGTGTCATCTGCATAGAGGTGATAATTAAGACCACGAGATCTAAGGAGATAGCCAAGAGGAAAAATATACATACAGAAGAGTAATGGGCTCAGAAGTGATCCCTGAGGTACCCCAAATTTGGCTGAGCCAATTTTAGACTTGTATCCACCCATGGAGACAAACTGTCTGCGGTCTGAGAGGTAAGACTTGAACCACTTCAATACAGTTACCAAGTTACCAGTTACCAATACAGATACCAAACACAGATTCCAACCGAAAGAGTAAAAGAGAATTATCAACCGTGTCAAAGGCCGTGCTGAGATCAAGAAGAATCAAAATTGACAGGCAGCCAGAGTCCACGGCAAGTATGATTCTTCTGCACAATCTGACTTTGCTGCAGCCTGGAATTGAACTGCTGGTTTCGTCTGGTCAGAGGAGAACTGGCCCCCCGACTGAGCCTGGTTTCTCCCAAGGTTTTTT*CTCCATTCTGTCACCGATGGAGTTTTGGTTCCTTGCCGCTGTTGCCTCTGGCTTGCTTAGTTG**GGGACACTTCATTTACAGCGATGTCGTTGACTTGATTGAAAATGATTGCACAGATACTATTTAAACTGAACTGAGCTGAATGATGACATCACTGAATTCAATGATGAACTGCCTTTAACTGTCATTTTGCATTATTGAC*CACTGTTTTTTCCTAATTAATGTTGTTCAGTTGCTTTGACACAATCTGTTTTGTTTAAAGTGCTATATAAATAAAGGTGACTTGACTTGACTTTCAGAAGTTAGAAACATCTTTCATGTGGGCAAGCTTTACTCTAAACATTTCATAAACCAGCTTTGTCTTACAGAGAAAGAAGATTTTCAGCATATGTTGGCTTGCATTCTCTTTATTTGCTTGGTAGCACTAACATAGTGACACTGTTCACAGAAGCACTAAGCTAAACTTCCTGAACACAAAAGTTGTAACATAACTTGTTGAGAATAAACTTCTCACACATTAAGTATTGTTTTTCTGCATTCTACATAACATTCCATTTCATAATT ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|50743211|gb|CF663118.2|CF663118 TCTTTATTTTGTTTGAACCTCCAAGACTGAAACATCTACAGTTAGTGTTAAAGGTCCAGCCTTACGAAGTTGGTAGGTTGAGCCAATAAGCATCACTTCCATCTTATCACTGTTAAGACAAAGAAAATTTTGAGACATACATATTTTTATCTCAGAAATACAATGTTCCAGGAAAGCAACAGCTGGACAATCACCTGGTTTTGAGTGAATGTACACCTGGGTGTCATCTGCATAGAGGTGATAATTAAGACCACGAGATCTAAGGAGATAGCCAAGAGGAAAAATATACATACAGAAGAGTAATGGGCTCAGAAGTGATCCCTGAGGTACCCCAAATTTGGCTGAGCCAATTTTAGACTTGTATCCACCCATGGAGACAAACTGTCTGCGGTCTGAGAGGTAAGACTTGAACCACTTCAATACAGTTACCAAGTTACCAGTTACCAATACAGATACCAAACACAGATTCCAACCGAAAGAGTAAAAGAGAATTATCAACCGTGTCAAAGGCCGTGCTGAGATCAAGAAGAATCAAAATTGACAGGCAGCCAGAGTCCACGGCAAGTATGATTCTTCTGCACAATCTGACTTTGCTGCAGCCTGGAATTGAACTGCTGGTTTCGTCTGGTCAGAGGAGAACTGGCCCCCCGACTGAGCCTGGTTTCTCCCAAGGTTTTTTTCTCCATTCTGTCACCGATGGAGTTTTGGTTCCTTGCCGCTGTTGCCTCTGGCTTGCTTAGTTG**GGGACACTTCATTTACAGCGATGTCATTGACTTGATTGAAAATGATTGCACAGATACTATTTAAACTGAACTGAG****ATGATGACATCACTGAATTCAATGATGAACTGCCTTTAATTGTCATTTTGCATTATTGACACACTG gi|109278958|gb|EC392003.1|EC392003 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLTGAGTCCTCTGCACAATCTGACTTTGCTGCAGCCTGGAATTTAACCGCTGGTTTCGTCTGGCCAGAGGAGAACTGGCCCCCCGATTGAGCCTGGTTTCTCCCAAGGTTTTTT*CTCCATTCTGTCACCGATGGAGTTTTGGTTCCTTGCCGCTGTTGCCTCTGGCTTGCTTAGTTG**GGGACACTTCGTTTACAGCGATATCATTGACTTGATTGCAAATGATTGCACAGATACTATTTAAACTGACCTGAGCTGCATTATAACATCATTGAATTCAATGATGAATTGCCTTTAACTGTCATTTTGCATTATTGAC*CACTGTTTTTTCCTAATTAATGTTGTTCAGTTGCTTTGACACAATCTGTTTTGTTTAAAGTGCTATATAAATAAAGGTGACTTGACTTGACTTTCAGAAGTTAGAAACATCTTTCATGTGGGCAAGCTTTACTCTAAACATTTCATAAACCAGCTTTGTCTTACAGAGAAAGAAGATTTTCAGCATATGTTGGCTTGCATTCTCTTTATTTGCTTGGTAGCACTAACATAGTGACACTGTTCACAGAAGCACTAAGCTAAACTTCCTGAACACAAAAGTTGTAACATAACTTGTTGAGAATAAACTTCTCACACATTAAGTATTGTTTTTCTGCATTCTACATAACATTCCATTTCATAATT gi|109281854|gb|EC393487.1|EC393487 LLLLLLLLLLLLLLLLLLLLLLLLLATGATTCTTCTGCAGAATCTGACTTTGCTGCAGCCTGGAATTGAATTGCTGGTTTCGTCTGGTCAGAGAAGAACTGGCCCCCCGACTGAGCCTGGTTTCTCCCAAGGTTTTTT*CTCCATTCTGTCACCGATGGAGTTTTGGTTCCTTGCCGCTGTTGCCTCTGACTTGCTTAGTTG**GGGATGCTTCATTTACAGCGATGTCGTTGACTT******AAATG****CACAAATACTATTGGAACTGAACTGAGCTGAATAATGACATCACTGAAT*CAATGATGAACTGACTT***CT****TTTTGCATACTTATA*CAC*GTTTTTTCCTATTTAATTCTGTAAAGCTGCTTTGACGCAATCCGTATTGTAAAAAGCGTTATATAAATAATGGTAACTTGACTTGACTTLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL gi|50734485|gb|CA968335.2|CA968335 LCTGCTGGTTTCGTCTGGTCGGGGGAGGGCTGGCCCCCCGTTTTCCCCTGGTTTCTCCCAAGGTTTTTT*CTCCGTTCTGTCGCCGATGGAGTTTTGGTTCCTTGCTGCTGTCGCCTCTGGTTTGCTTGGTTTTTGGGACACTTCNTTTGCAGCGGTGTCGTTGACTTGGTTGCGGATGGTTGCGCAGATGCTATTTAGACTGAGCTGGGCTGAATGATGACATCACTGAGTTCGGTGGTGGGCTGCCTTTGACTGTCATTTTGCATTGTTGGCGCACTGTTTT**CCTGGTTGGTGTTGTTCAGTTGCTTTGACACAATCTGTTTTGTTTAAGGCGCTATATAAATAAGGGTCACTTCACTTGACTTLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL Putative SNPs: 652C>T, 771A>G 35. 100 200 300 400 500 600 700 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|...... Cyprinus_Cluster8013.seq.Contig1 GGGGGAGCACAGACTCTCTG*CCCACAGAAAACATCTCTGAAAGAAGAAGAAGAAAAAAAAAGGCATAATCAT*GAATAAAATACTGGCATTGTGCATCGGGTTACTGATTATAACCTTACCTTTTTCATCTCAGCAGGACCAAATTACAGCCAAAACACCTTCCCCCAGTAAACCTCCTGAGACTACAAAGCCTCCTCCCAGTGCTGCAGGACTGGGTCCTCTGCCCACCGTGCTGTGCCTTCTGATCCCAGCAGCCACCCTGGGCTTCATTCACAGTAGATTCTAAACTGGCTGGAGAATGTTTAGATGACCAAGAGGAGCAAAGATAGATAGCCAGTCACATGAAGACCAAACTTTTCCAAAATTCTTTAAGATAGAAGACACAGCAAGAACAACTCAACAAGAAGATGCCACAACAAATCACATTAGTTACAGATTAACAGGCTATTATTTTTTTTTTAAATAGTAAAAACTGGGATGTA*AAGGAAAATTTCCACTGTATACTGTACCGAGGG*TCCTCCAAACCCCAACGAAACCACACCATCTGAA*CTCTTA*GTT*GTGTTTTAGCCCTGCTTTCAATTGGACTCA****TCAGTTGCAACATCTTTTTGAAAGACTGTATGAATCT*GATCACTGTAATCCACCTTCTCCGAAATATTTTTGCACTAACTGTGATGAACTATCAATTGTAATGATT ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|109280088|gb|EC392580.1|EC392580 GGGGGAGCACAGACTCTCTG*CCCACAGAAAACATCTCTGAAAGAAGAAGAA*****AAAAAGGCATAATCAT*GAATAAAATACTGGCATTGTGCATCGGGTTACTGATTATAACCTTACCTTTTTCATCTCAGCAGGACCAAATTACAGCCAAAACACCTTCCCCCAGTAAACCTCCTGAGACTACAAAGCCTCCTCCCAGTGCTGCAGGACTGGGTCCTCTGCCCACCGTGCTGTGCCTTCTGATCCCAGCAGCCACCCTGGGCTTCATTCACAGTAGATTCTAAACTGGCTGGAGAATGTTTAGATGACCAAGAGGAGCAAAGATAGATAGCCAGTCACATGAAGACCAAACTTTTCCAAAATTCTTTAAGATAGAAGACACA***AGAACAACTCAACAAGAAGATGCCACAACAAATCAGGTT**TT******TAA*********ATTTTTTT****AATAGTAAAAACTGGAATGTA*AAGGAAAATTTCCACTGTATACGNTAACGGGGGGTCCTCCAAACCCCAACGAAACCACACCATCTGAA*CTCTTA*GTTTGTGTTTTAGCCCTGCTTTCAATTGGACTCA****TCAGTTGCAACATCTTTT*GAAAGACTGTATGAATCT*GATCACTGTAATCCACCTTCTCCGAAATATTTTTGCACTAACTGTGATGAACTALL gi|22022048|gb|AU279316.1|AU279316 GACTCTCTG*CCC*CAGAAAACATCTCTGAAAGAAGAAGAAGAAAAAAAAAGGCATAATCATNGAATAAAATACTGGCATTGTGCATCGGGTTACTGATTATAACCTTACCTTTTTCATCTCAGCAGGGCCAAACTTCAGCAACATCACCTACCCCCAGTAAAACTGCTGCGACTACAAAGCCTCCTCCCAGTGCTGCAGGACTGGGTCCTCTGCCCACCGTGCTGTGCCTTCTGATCCCAGCAGCCACCCTGGGCTTCATTCACAGTAGATTCTAAACTGGCTGGAGAATGTTTAGATGACCAAGAGGAGCAAAGATAGATAGCCAGTCACATGAAGACCAAACTTTTCCAAAATTCTTTAAGATAGAAGACACA***AGAACAACTCAACAAGAAGATGCCACAACAAATCAGGTT**TT*****TTAA*************TTTTTTTAA*TAGTAAAAACTGGGATGTA*AAGGAAAATTTCCACTGTATACTGTACCGAGGG*TCCTCCAAACCCCAACGAAACCACACCATCAGA**CTCTTA*GTT*GTGTTTTAGCCCTGCTTTCAATTGGACTC*****TCAGTTGCAACATCTTTTTGAAAGACTGTATGAATCTTGATCACTGTAATCCACCTTCTCCGAAATATTTTTGC*CTAACTGTGATGAACTALLLLLLLL gi|109278116|gb|EC391556.1|EC391556 GGGGGAGCACAGACTCTCTGGCCCACAGCAAACATCACTG***GAAGAAGAAGAA*******GGCATCATCAT*GAATAAAATACTCGCATTGTGCCTTGGGTTACTGATTATAACCTTACCCTTTTCATCTCAG**GGAG*AGACTAAA*CCTAA*CAAC*******ACTGA***TGCTGGTACT*CAAAAAGGGC**CCAGTTCTGGAGGATTGGGTCCGCTGCCCACCGCGCTGTGCCTGCTGATCCCAGCAGTCACCCTGGGCTTCATCCACAGTAGATCCTAAACTGGCTGGAGAATGTTTAGATGACCAAGAGGAGCAAAGA************CAC**GAAGAGCAAACTTTTCCAAAATTCTTGAAGATAGAAGACACAGCAAGAACAACTCAACAAGGAGGTGCCACAACAACTCACATTAGTTACAGATTAACAGGCTATTATTTTTTTTTTAAATAATAAAAACTGGGATTTTGAAGGAA**TTGCCACTGTATACTGTACCGAGGG*TCCTCCAAACCCCAACAAAACCACACCATGAGTCTCTTTTTTGTT*GTGTTTTAGTCTTGCTTTAAATTGAACTTAGAAATCAGTCGCAACATCTTGT*GAAAGACTGTATGAATCT*GATCATTGTAATCCATGTCCTCCAAAATATTTTTGTACTAATTGTGATGAACTATCAATTGTAATGATT gi|50737685|gb|CA964558.2|CA964558 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLCCAGTGCTGTAGGATTGGGTCCTGTGCCTACCACACTGTGCCTGCTGATCCCTGCAGCCACCCTGGGCTTCATCCACAGTAGATCCTAAACTGLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL Putative SNPs: 214C>T, 233T>C, 243T>G, 273T>C, 284T>C 36. 100 200 300 400 500 600 700 800 900 1000 1100 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+......... Cyprinus_Cluster8017.seq.Contig1 CGGGTGGAGCTCTTCAGAATTGGAGGGAAGTCACCTGACACTAACTACCTGTTTATGGGTGACTATGTAGACAGAGGATATTACTCGGTGGAGACAGTCTCACTTCTTGTTGCACTAAAGGTTCGCTATCCAGAACGCATCACGATATTGCGGGGAAACCACGAGAGCAGACAGATCACACAGGTTTATGGCTTCTATGACGAGTGCTTGAGGAAATATGGCAACGCAAATGTCTGGAAATATTTCACAGACCTCTTTGACTACCTACCCCTCACAGCTCTAGTGGATGGGCAGATCTTCTGTCTGCACGGTGGCCTCTCTCCATCCATAGACACGCTGGATCACATTCGTGCGCTGGATCGTCTGCAGGAGGTGCCACATGAGGGACCCATGTGTGACCTGCTGTGGTCAGACCCTGATGATCGCGGTGGCTGGGGAATCTCTCCACGTGGAGCTGGTTACACGTTTGGACAGGACATTTCTGAGACCTTCAACCATGCTAATGGCCTGACGCTGGTGTCTCGCGCTCATCAGCTGGTCATGGAGGGATACAACTGGTGTCATGATAGGAACGTTGTCACTATCTTCAGTGCGCCAAACTACTGCTATCGCTGTGGAAACCAGGCAGCCATTATGGAACTGGATGATACTCTTAAATATTCGTTCCTTCAGTTTGATCCAGCTCCTCGACGCGGAGAACCTCACGTCACCCGCCGCACCCCCGACTACTTCCTATAAGTGAGCACTGGCCTGCCACGAAAGAGCTCTGAAGCAAGCAGAAAATGAC***AAATCCAAACGTCTATACATCTGTTCATCCAATGTGTATATAAAATGGGAGAAATGTTCTGACACAACAACACTAACACGGACCAAAATGTGCCATTCAAGCATTTAATGCCCAAATCCAATCGCTCTGTCTCAGTACTGCTACAAAGTGTCTCATTTAAGCCTATAGTGCAAATTGCCTGCTGTATACAATAAATAGAGATGTTCCCTTCGTTCTGCAATTGTAAATTACTCTAAAGTACAAAAAATAAAAAATTGTTAGTTACTAGCTTTCTCTCTCACAGTATCACTGGATAAAAAAAATCCTTTAAGTTAGCAATGCCAGGCATGTGAAAAATGGTAACATTTTATACAAGTGCACAAGCTGACATCCTTTCCTGTATCTTCACCAGAATAAAAAATCCTATTGG ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|109284129|gb|EC394670.1|EC394670 CGGGTGGAGCTCTTCAGAATTGGAGGGAAGTCACCTGACACTAACTACCTGTTTATGGGTGACTATGTAGACAGAGGATATTACTCGGTGGAGACAGTCTCACTTCTTGTTGCACTAAAGGTTCGCTATCCAGAACGCATCACGATATTGCGGGGAAACCACGAGAGCAGACAGATCACACAGGTTTATGGCTTCTATGACGAGTGCTTGAGGAAATATGGCAACGCAAATGTCTGGAAATATTTCACAGACCTCTTTGACTACCTACCCCTCACAGCTCTAGTGGATGGGCAGATCTTCTGTCTGCACGGTGGCCTCTCTCCATCCATAGACACGCTGGATCACATTCGTGCGCTGGATCGTCTGCAGGAGGTGCCACATGAGGGACCCATGTGTGACCTGCTGTGGTCAGACCCTGATGATCGCGGTGGCTGGGGAATCTCTCCACGTGGAGCTGGTTACACGTTTGGACAGGACATTTCTGAGACCTTCAACCACGCTAACGGCCTCACGCTGGTGTCTCGCGCTCATCAGCTAGTCATGGAGGGATACAACTGGTGTCATGATAGGAACGTTGTCACTATCTTCAGTGCGCCAAACTACTGCTATCGCTGTGGAAATCAGGCAGCCATTATGGAACTGGACGATACTCTTAAATATTCATTCCTTCAGTTTGATCCAGCTCCTCGACGTGGAGAACCTCACGTCACCCGC*GCACCCCCGACTACTTC gi|109284030|gb|EC394616.1|EC394616 LLLGTGATCTGCTGTGGTCAGACCCTGATGATCGTGGTGGCTGGGGAATCTCTCCACGTGGAGCTGGTTACACGTTTGGACAGGACATTTCTGAGACCTTCAACCATGCTAATGGCCTGACGCTGGTGTCTCGCGCTCATCAGCTGGTCATGGAGGGATACAACTGGTGTCATGATAGGAACGTTGTCACTATCTTCAGTGCGCCAAACTACTGCTATCGCTGTGGAAACCAGGCAGCCATTATGGAACTGGATGATACTCTTAAATATTCGTTCCTTCAGTTTGATCCAGCTCCTCGACGCGGAGAACCTCACGTCACCCGCCGCACCCCCGACTACTTCCTATAAGTGAGCACTGGCCTGCCACGAAAGAGCTCTGAAGCAAGCAGAAAATGAC***AAATCCAAACGTCTATACATCTGTTCATCCAATGTGTATATAAAATGGGAGAAATGTTCTGACACAACAACACTAACACGGACCAAAATGTGCCATTCAAGCATTTAATGCCCAAATCCAATCGCTCTGTCTCAGTACTGCTACAAAGTGTCTCATTTAAGCCTATAGTGCAAATTGCCTGCTGTATACAATAAATAGAGATGTTCCCTTCGTTCTGNCATTGTAAATTACTCTAAAGTACAAAAAATAAAAAATTGTTAGTTACTAGCTTTCTCTCTCACAGTATCACTGGATAAAAAA**TCCTTTAAGTT gi|50741155|gb|CF662264.2|CF662264 LLATCTCTCC*CGTGGAGCTGGTTAC*CGTTTGGACAGGACATTTCTGAGACCTTCAACCATGCTAATGGCCTGACGCTGGTGTCTCGCGCTCATCAGCTGGTCATGGAGGGATACAACTGGTGTCATGATAGGAACGTTGTCACTATCTTCAGTGCGCCAAACTACTGCTATCGCTGTGGAAACCAGGCAGCCATTATGGAACTGGATGATACTCTTAAATATTCGTTCCTTCAGTTTGATCCAGCTCCTCGACGCGGAGAACCTCACGTCACCCGCCGCACCCCCGACTACTTCCTATAAGTGAGCACTGGCCTGCCACGAAAGAGCTCTGAAGCAAGTAGAAAATGAC***AAATCCAAACGTCTATACATCTGTTCATCCAATGTGTATATAAAATGGGAGAAATGTTCTGACACAACAACACTAACACGGACCAAAATGTGCCATTCAAGCATTTAATGCCCAAATCCAATCGCTCTGTCTCAGTACTGCTACAAAGTGTCTCATTTAAGCCTATAGTGCAAATTGCCTGCTGTATACAATAAATAGAGATGTTCCCTTCGTTCTGCAATTGTAAATTACTCTAAAGTACAACAAA*AAAAAATTGTTAGTTACTAGCTTTCTCTCTCACAGTATCACTGGATAAAAAAAATCCTTTAAGTTAGCAATGCCAGGCATGTGAAAAATGGTAACATTTTATACAAGTGCACAAGCTGACATCCTTTCCTGTATCTTCACCAGAATAAAAAATCCTATTGG gi|109278099|gb|EC391548.1|EC391548 LGGACGATACTCTTAAATATTCATTCCTTCAGTTTGATCCAGCTCCTCGACGTGGAGAACCTCACGTCACCCGCCGCACCCCCGACTACTTCCTGTAAGCAAGCACTGGCCTGCCACGAATGAGCTCTGAAGCAAGCGGAAAATGATGAAAAATCCAAACGTCTATACATCTGTTCACCCACTGTGTATATAAAATGGGGGAAATATT**GACACAACAACACTAACACGGACCAAAATGTGCCATACAAGCATTAAATGCCCAAATCTGATCGCTCTGTCTCAGTACTGCTACAAAGTGTCTCGTTTTAGCCTATAGTGCAAATTGCCTGCTGTATACAATGAATAGAGATGTTCCCTTTGTTCTTCGATTGTAAATTACTCTLLLLL Putative SNPs: 645C>T, 663A>G, 693T>C 37. 100 200 300 400 500 600 700 800 900 1000 1100 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+. Cyprinus_Cluster8021.seq.Contig1 GGGGAAGAAGAAAAAGAAAAAAGAAGACGGTTCAAAGGGAAATGCGTGTGTTTCTTTTTTTATTTTAATTTCTAATTTTATTTATTTAATTTTTTATGGCGATAGTGGAATGGCGATTTTGTTCTTTTTTATTTTTGGTTTTATCCCACCATGGTTTTGTCGGTGTTGATATTGTCGGAGAATCAGTGTTGGAGGGAGATTCAGTCACTCTAAACACTTATGTTGAAACAAACCAACAAGAAGATATAAAATGGTATTTTAATGACATTAGAATAGCTGAAATCAGTGGAGATCTCAGTGATATCTGTACAGATGTTCAGTGTAATGAAGGTACTGAGAGATTCAGAGACAGACTGAAGCTGGACAATCAGACTGGATCTCTGACCATCACAAACACCAGAACCACAGACTCTGGACTTTATGAATTAAAGATCATCAGCAGCAACAGCATCAGTGAAAAGACCTT*CAATGTTACTGTTTATGGTGTTTCTGCTTCTGAACAAGATGAA*AAGTCAGTGAAGGAGGGAGAATCTGTCACTTTAGATCCTGGTGTAGTAAGACAAC*CAAATGAGGTGATGAGATGGTATTATAAAGACACTCTCATCGCT*GAAATCACT*CAATATCTGAGTAACGTCTGTACAGAT*GATGAGTG*TAAAGAGAGATTCAGAGACAGACTGCAGCTGGATCATCAGACTGGATCTCTGACCATCAGGCACATCAGAATCACAGACTCTGGACTTTATGAACTAAAGATCAGCAGCAGCAGTCGCCGCCGCCGCCGCAGCATCAGCAGTGTAAAGAGCTTCGATGTTACTGTCATTAATTCAGGTCTGTCTCTGGGTGCTGTAGCAGGTCTGTCTGTTATTGTTCTTCTACTGGTGACTGCAGCTGTAGCTGTTGGTGTGATTTTTTATCACGGCAAGAGATCCATAAACGGTCACGAGATTGTGCAGTCCGAACAGGATTAGTGGGTAACATGATTTCTACTGAAGCATTATTCACATTGATCCATCGTTTCCCAAAAATACTGTACCTAATGATCATCAAGGGGCCATTCACACAGAAACGGGTTTTTCCATTCCACCTCGGTACTTTTCCGATTGTTTTTTCTGTGTAATCACATGCTAGAAAAAC ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|109280247|gb|EC392664.1|EC392664 GGGGAAGAAGAAAAAGAAAAAAGAAGACGGTTCAAAGGGAAATGCGTGTGTTTCTTTTTTTATTTTAATTTCTAATTTTATTTATTTAATTTTTTATGGCGATAGTGGAATGGCGATTTTGTTCTTTTTTATTTTTGGTTTTATCCCACCATGGTTTTGTCGGTGTTGATATTGTCGGAGAATCAGTGTTGGAGGGAGATTCAGTCACTCTAAACACTTATGTTGAAACAAACCAACAAGAAGATATAAAATGGTATTTTAATGACATTAGAATAGCTGAAATCAGTGGAGATCTCAGTGATATCTGTACAGATGTTCAGTGTAATGAAGGTACTGAGAGATTCAGAGACAGACTGAAGCTGGACAATCAGACTGGATCTCTGACCATCACAAACACCAGAACCACAGACTCTGGACTTTATGAATTAAAGATCATCAGCAGCAACAGCATCAGTGAAAAGACCTT*CAATGTTACTGTTTATGGTGTTTCTGCTTCTGAACAAGATGAA*AAGTCAGTGAAGGAGGGAGAATCTGTCACTTTAGATCCTGGTGTAGTAAGACAAC*CAAATGAGGTGATGAGATGGTATTATAAAGACACTCTCATCGCT*GAAATCACT*CAATATCTGAGTAACGTCTGTACAGAT*GATGAGTG*TAAAGAGAGATTCAGAGACAGAC gi|109280708|gb|EC392898.1|EC392898 GGGGAAGAAGAAAAAGAAAAAAGAAGACGGTTCAAAGGGAAATGCGTGTGTTTCTTTTTTTATTTTAATTTCTAATTTTATTTATTTAATTTTTTATGGCGATAGTGGAATGGCGATTTTGTTCTTTTTTATTTTTGGTTTTATCCCACCATGGTTTTGTCGGTGTTGATATTGTCGGAGAATCAGTGTTGGAGGGAGATTCAGTCACTCTAAACACTTATGTTGAAACAAACCAACAAGAAGATATAAAATGGTATTTTAATGACATTAGAATAGCTGAAATCAGTGGAGATCTCAGTGATATCTGTACAGACGTTCAGTGTAATGAAGGTACTGAGAGATTCAGAGACAGACTGAAGCTGGACAATCAGACTGGATCTCTGACCATCACAAACACCAGAACCACAGACTCTGGACTTTATGAATTAAAGATCATCAGCAGCAACAGCATCAGTGAAAAGACCTT*CAATGTTACTGTTTATGGTGTTTCTGCTTCTGAACAAGATGAA*AAGTCAGTGAAGGAGGGAGAATCTGTCACTTTAGATCCTGGTGTAGTAAGACAAC*CAAATGAGGTGATGAGATGGTATTATAAAGACACTCTCATCGCT*GANATCACT*CAATATCTGAGTAACGTCTGTACAGAT*GATGAGTG*TAAAGAGAGATTCAGAGACAGAC gi|50741363|gb|CF662462.2|CF662462 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLTCAGTGATGGTGGGAGATTCAGTCGCTCTACACACTGATGTTAAAACAAACCAGATAGAAAAGATTAAATGGTTTTTTAATGACATTCGCATAGCGCAAATCAGTGACTATCTCAGTAAGACCTGTACAGATGTTCAGTGTAATGAAGGTACTGAGAGATTCAGAGACAGACTGAAGCTGGACAATCAGACTGGATCTCTGACTATCATGAACATCAACACCACAGACTCTGGAGATTATAAATTACAGATCATCAAAACCAACAGCATGAGCGAAAATATCTTTCGA*GTCACTGTCCG*GGAGA**CGGAT****AAAATGAAGACCAAGACAGTGAAGGAGGGACAATCTGTCACTTTAGATCCTGGTGTAATAAAA*AACACAAATTATTTGATGAAGTGGTATTTTAACGATACTCTCATCGCTAGAGATACCAGCCAGATCTC**TACAGA*TGTTGAGTTTGAAGA*TGCTGGCGGGAGATTCAGAGACAGACTGAAGCTGGATCATCAGACTGGATCTCTGACCATCACAAACACCAGAACCACAGACTCTGGAGATTATCATCTTGAGATCALLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL gi|109283296|gb|EC394226.1|EC394226 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLA*AAGTCAGTGAAGGAGGGAGAATCTGTCACTTTAGATCCTGGAGTAATAAAACAAC*CAAATCATGTGATGATGTGGTATTTTAATGACACTCTCATCGCT*GAAATCACT*GGAGATCCCAACAAGGCCTGCACAGAC*TTTCATTG*TCCCGAGAGATTTAGAGACAGACTGCAGCTGGATCATCAGACTGGATCTCTGACCATCAGGCACATCAGAATCACAGACTCTGGACTTTATGAACTAAAGATCAGCAGCAGCAGTCGCCGCCGCCGCCGCAGCATCAGCAGTGTAAAGAGCTTCGATGTTACTGTCATTAATTCAGGTCTGTCTCTGGGTGCTGTAGCAGGTCTGTCTGTTATTGTTCTTCTACTGGTGACTGCAGCTGTAGCTGTTGGTGTGATTTTTTATCACGGCAAGAGATCCATAAACGGTCACGAGATTGTGCAGTCCGAACAGGATTAGTGGGTAACATGATTTCTACTGAAGCATTATTCACATTGATCCATCGTTTCCCAAAAATACTGTACCTAATGATCATCAAGGGGCCATTCACACAGAAACGGGTTTTTCCATTCCACCTCGGTACTTTTCCGATTGTTTTTTCTGTGTAATCACATGCTAGAAAAAC Putative SNPs: 557G>A, 561G>A, 575G>T, 584A>G, 592A>T, 626T>G, 631G>C, 663A>C 38. 100 200 300 400 500 600 700 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+...... Cyprinus_Cluster8025.seq.Contig1 CGGGGCAGTGCTTTTGACCTACACCGTCGCAGGAGAAAATGGCAGCGCTTGGAGTGGGGCTGCGGGTGCGTCAGTTTAGCACCTCTGTGATCCGACCAGCAGCAAAACTCGTCAAGCCCCCTATCCAGGTCTATGGGGTGGAGGGACGTTATGCTACTGCCCTGTTCTCTGCTGCCAGCAAGCAGAAGAACCTCGATAAGGTCGAACAGGAACTTGTCCGTGTGTCTAGCCTGATTAAGGATCCTAAGCTGTCAAGTATTGTGATGAATCCTCATATCAAGCGCAGTCTCAAACAGAAGACTTTCATTGATGCTTTGACTAAGGCGAAACTCTCCCCCATCACCATCAACCTCATCAATGTCCTAGCAGAAAATGGCCGCTTGACCTTGACCCCTGATGTCATCACAGCCTTTGGCAAAATGATGAGTGCCCACAGAGGAGAGGTCACATGCTCAGTCACCACCGCTCAGCCTCTGGATGAAGCTAATCTTGCAGAGCTGAAGGTGGCACTGAATGGTTTCCTGACAAAGGGAGAGACCATCAAACTTGAGACCAAGTCTGATCCCTCTATCCTTGGGGGCATGATCGTGAGCATTGGTGATAAGTATGCGGACATGTCTACCAAGACAAAGATCCAGAAGCTCACCAAGCTGATCAGGGAGACCTAAGTCCTGTGGACTGACCAGACCTAATCAATACAAGATTCAGGGGGTGAAGAAAGAACAACCTCTCTGTGCTATTGTGTAGTTGAATTACCTTGTCCAGCTGTTCAAAATAAATATTATGTAACATTTAC ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|50743914|gb|CA967163.2|CA967163 CGGGGCAGTGCTTTTGACCTACACCGTCGCAGGAGAAAATGGCAGCGCTTGGAGTGGGGCTGCGGGTGCGTCAGTTTAGCACCTCTGTGATCCGACCAGCAGCAAAACTCGTCAAGCCCCCTATCCAGGTCTATGGGGTGGAGGGACGTTATGCTACTGCCCTGTTCTCTGCTGCCAGCAAGTAGAAGAACCTCGATAAGGTCGAACAGGAACTTGTCCGTGTGTCTAGCCTGATTAAGGATCCTAAGCTGTCAAGTATTGTGATGAATCCTCATATCAAGCGCAGTCTCAAACAGAAGACTTTCATTGATGCTTTGACTAAGGCGAAAATCTCCCCCATCACCATCAACCTCATCAATGTCCTAGCAGAAAATGGCCGCTTGACCTTGACCCCTGATGTCATCACAGCCTTTGGCAAAATGATGAGTGCCCACAGAGGAGAGGTCACATGCTCAGTCACCACCGCTCAGCCTCTGGATGAAGCTAATCTTGCAGAGCTGAAGGTGGCACTGAATGGTTTCCTGGCAAAGGGAGAGACCATCAAACTTGAGACCAAGTCTGAACCCTCTATCCTTGGGGGCATGATCGTGAGCATTGGTGATAAGTATGCGGACATGTCTACCAAGACAAAGATCCAGAAGCTCACCAAGCTGATCAGGGAGACCTAAGTCCTGTGGACTGACCAGACCTAATCAATACAAGATTCANGGGGTGAAGAAAGAACAACCTCTCTCTGCTATTGTGTAGTTGAATTACCTTGTCCAGCTGTTCAAAATAAATATTATGTAACATTTAC gi|4806254|gb|AU062370.1|AU062370 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLTGGCAGCGCTTGGAGTGGGGCTGCGGGTGCGTCAGTTTAGCACCTCTGTGATCCGACCAGCAGCAAAACTCGTCAAGCCCCCTATCCAGGTCTATGGGGTGGAGGGACGATATGCTACTGCCCTGTTCTCTGCTGCCAGCAAGCAGAAGAACCTCGATAAGGTCGAACAGGAACTTGTCCGCGTGTCTAGCCTGATTAAGGATCCTAAGCTGTCAAGTATTGTGATGAATCCTCATATCAAGCGCAGTCTCAAACAGAAGACTTTCATTGATGCTTTGACTAAGGCGAAACTCTCCCCCATCACCATCAACCTCATCAATGTCCTAGCAGAAAATGGCCGCTTGACCTTGACCCCTGATGTCATCACAGCCTTTGGCAAAATGATGAGTGCCCACAGAGGAGAGGTCACATGCTCAGTCACCACCGCTCAGCCTCTGGATGAAGCTAATCTTGCA gi|50740981|gb|CA967158.2|CA967158 AAATGGCAGCGCTTGGAGTGGGGTCGCGGGTGCGTCAATTTAGCACCTCTGTGATCCGACCAGCAGCAAAACTTGTCAAGCCCCCTACCCAGGTCTATGGGGTGGAGGGACGTTATGCTAGTGCCCTGTTCTCTGCTGCCAGCAAGCAGAAGAACCTCGATAAGGTCGAACAGGAACTTGTCCGTGTGTCTAGCCTGATTAAGGATCCTAAGCTGTCAAGTATCGTCATGAATCCTCATATCAAGCGCAGTCTCAAACAGAAGACTTTCATTGATGCTTTGACTAAGGCGAAACTCTCCCCCATCACCATCAACCTCATCAATGTCCTAGGAGAAAATGGCCGCTTGACCTTGACCCATGATGTCATCACAGCCTTTGGCAAAATGATGAGTGCCCACAGAGGAGAGGTCACATGCTCAGTCACCACTGCTCAGCCTCTGGATGAAGCTAATCTTG gi|50743968|gb|CF661700.2|CF661700 GTTATGCTACTGCCCTGTTCTCTGCTGCCAGCAAGCAGAAGAACCTCGATAAGGTCGAACAGGAACTTGTCCGTGTGTCTGGCCTGATTAAGGATCCTAAGCTGTCAAGTATCGTGATGAATCCTCATATCAAGCGCAGTCTCAAACAGAAGACTTTCATTGATGCTTTGATTAAGGCGAAACTCTCCCCCATCACCATCAACCTCATCAATGTCCTAGCAGAAAATGGCCGCTTGACCTTGACCCATGATGTCATCACAGCCTTTGGCAAAATGATGAGTGCTCACAGAGGAGAGGTCACATGCTCAGTCACCACCGCTCAGCCTCTGGATGAAGCTAATCTTGCAGAGCTGAAGGTGGCACTGAATGGTTTCCTGACAAAGGGAGAGACCATCAAACTTGAGACCAAGTCTGATCCCTCTATCCTTGGGGGCATGATCGTGAGCATTGGTGATAAGTATGCGGACATGTCTACCAAGACAAAGATCCAGAAGCTCACCAAGCTGATCAGGGAGACCTAAGTCCTGTGGACTGACCAGACCTAATCAATACAAGATTCAGGGGGTGAAGAAAGAACAACCTCTCTGTGCTATTGTGTAGTTGAATTACCTTGTCCAGCTGTTCAAAATAAATATTATGTAACATLL Putative SNPs: 260T>C, 394C>A 39. 100 200 300 400 500 600 700 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+. Cyprinus_Cluster8034.seq.Contig1 GAGTGTGTGCACACAAGCAAGGAGGGCTGTGTTTGGTGGGTTTCGTCTGGAAAATGCTGTAGTAAAACCCAAATT*CGTTCAAAATGGCTGCTGCTCATCGTTTAGTGATTGTACGCCACGGCGAGAGCTCCTGGAACCAAGAGAACCGTTTCTGTGGCTGGTTTGATGCAGACCTCAGTGAAAAGGGTCTGGAGGAAGCAAAGCGAGGTGCTCAAGCCATCAAAGATGCAGGCATGAAGTTTGATGTGTGCTACACTTCCGTTTTGAAGCGCGCTATCAAGACTCTGTGGACCATCATGGAGGTCACAGACCAGATGTGGCTGCCTGTAGTGCGCACCTGGCGTCTGAATGAACGTCACTACGGTGGTCTGACTGGTCTGAACAAGGCAGAGACGGCAGCCAAGCACGGAGAGGAGCAGGTCAAGGTCTGGCGCAGATCATTTGATATTCCCCCTCCTCCTATGGATAAGGACCATCCATATCACAAGATCATCAGCGAGTCAAGACGATACAAGGGTCTGAAAGAGGGTGAGCTACCCATCTGCGAGAGCTTGAAGGATACCATCGCTCGTGCCCTGC*CATTCTGGAATGAGGTTATTGTACCTGAGATCAAGGCCGGCAAAAACGTCATAATCGCAGCTCACGGCAACAGCCTCTCGTGGAATTGTCAAGCACTTAGAGAGCATGTCAGATGCAGCCATCATGGAGCTAAACCTGCCCACAGGCATTCCCATCGTCTATGAGCTGGACAAGGACCTGAAGCCCATTAAACCCATGCA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|50735739|gb|CA969517.2|CA969517 GAGTGTGTGCACTCA*GCTAGGAGGGCTGTGTTTGGTGGGTTTAGTCTGGAAAATACTGTAGTGAAAACCAAATTTCTTTCAGAATGGCTGCTGCTCATCGTCTAGTGATTGTACGCCATGGTGAGAGCTCCTGGAACCAGGAGAACCGTTTCTGTGGCTGGTTTGATGCAGACCTCAGTGAAAAGGGTCTGGAGGAAGCAAAGCGTGGTGCTCAAGCCATCAAAGATGCAGGCATGAAGTTTGATGTGTGCTACACCTCCGTTCTGAAGCGTGCTATCAAGACTCTGTGGACAATCATGGAGATCACAGACCAGATGTGGCTGCCTGTAATGCGCACCTGGCGTCTGAATGAACGTCACTACGGTGGTCTGACTGGTCTGAACAAGGCAGAGACGGCAGCCAAGCACGGAGAGGAGCAGGTCAAGATCTGGCGCAGATCATTCCATATTCCCCCTCCTCCTATGGATAAGGACCATCCATACAACAAGATCATCAGTGAGTCAAGACGATATAAGGGTCTGATAGAAGGTGAGCTTCCCATCTGCGAGAGCTTGAAGGACACCATCGCTCGTGCCCTGC*CL gi|50742286|gb|CF660428.2|CF660428 GTGTGCACACAAGCAAGGAGGGCTGTGTTTGGTGGGTTTCGTCTGGAAAATGCTGTAGTAAAACCCAAATT*CGTTCAAAATGGCTGCTGCTCATCGTTTAGTGATTGTACGCCACGGCGAGAGCTCCTGGAACCAAGAGAACCGTTTCTGTGGCTGGTTTGATGCAGACCTCAGTGAAAAGGGTCTGGAGGAAGCAAAGCGAGGTGCTCAAGCCATCAAAGATGCAGGCATGAAGTTTGATGTGTGCTACACTTCCGTTTTGAAGCGCGCTATCAAGACTCTGTGGACCATCATGGAGGTCACAGACCAGATGTGGCTGCCTGTAGTGCGCACCTGGCGTCTGAATGAACGTCACTACGGTGGTCTGACTGGTCTGAACAAGGCAGAGACGGCAGCCAAGCACGGAGAGGAGCAGGTCAAGGTCTGGCGCAGATCATTTGATATTCCCCCTCCTCCTATGGATAAGGACCATCCATATCACAAGATCATCAGCGAGTCAAGACGATACAAGGGTCTGAAAGAGGGTGAGCTACCCATCTGCGAGAGCTTGAAGGATACCATCGCTCGTGCCCTGCTCATTCTGGAATGAGGTTATTGTACCTGAGATCAAGGCCGGCAAAAACGTCATAATCGCAGCTCACGGCAACAGCCTCCGNTGGAATTGTCAAGCACTTAGAGAGCATGTCAGATACAGCCATCATGGAGCTAAACCTGCCCACAGGCATTCCCATCGTCTATGAGCTGGACAAGGACCTGAAGCCCATTAAACCCATGCA gi|50740768|gb|CA966973.2|CA966973 GTGTGCACACAAGCTCGGAGGGCTGTGTTTGGTGGGTTTCCTCTGGAAAATACTGTAGTAAAACCCAAATT*CGTTCAAAATGGCTGCTGCTCATCGTTTAGTGATTGTACGCCACGGCGAGAGCTCCTGGAACCAAGAGAACCGTTTCTGTGGCTGGTTTGATGCAGACCTCAGTGAAAAAGGTCTGGAGGAAGCAAAGCGAGGTGCTCAAGCCATCAAAGATGCAGGCATGAAGTTTGATGTGTGCTACACTTCCGTTTTG gi|50742442|gb|CF660542.2|CF660542 GTGCACACAAGCAAGGAGGGCTGTGTTTGGTGGGTTTCGTCTGGAAAATGCTGTAGTAAAACCCAAATT*CGTTCAAAATGGCTGCTGCTCATCGTTTAGTGATTGTACGCCACGGCGAGAGCTCCTGGAACCAAGAGAACCGTTTCTGTGGCTGGTTTGATGCAGACCTCAGTGAAAAGGGTCTGGAGGAAGCAAAGCGAGGTGCTCAAGCCATCAAAGATGCAGGCATGAAGTTTGATGTGTGCTACACTTCCGTTTTGAAGCGCGCTATCAAGACTCTGTGGACCATCATGGAGGTCACAGACCAGATGTGGCTGCCTGTAGTGCGCACCTGGCGTCTGAATGAACGTCACTACGGTGGTCTGACTGGTCTGAACAAGGCAGAGACGGCAGCCAAGCACGGAGAGGAGCAGGTCAAGGTCTGGCGCAGATCATTTGATATTCCCCCTCCTCCTATGGATAAGGACCATCCATATCACAAGATCATCAGCGAGTCAAGACGATACAAGGGTCTGAAAGAGGGTGAGCTACCCATCTGCGAGAGCTTGAAGGATACCATCGCTCGTGCCCTGC*CATTCTGGAATGAGGTTATTGTACCTGAGATCAAGGCCGGCAAAAACGTCATAATCGCAGCTCACGGCAACAGCCTCTCGTGGAATTGTCAAGCACTTAGAGAGCATGTCAGATGCAGCCATCATGGAGCTAAACCTGCCCACAGGCATTCCCATCGTCTATGAGCTGGACAAGGACCTGAAGCCCATTAA*CCCATGC gi|50740970|gb|CA967134.2|CA967134 CTCCTGGAACCAACAGAACCGTTTCTGTGGCTGGTTTGATGCAGACCTCAGTGAAAAGGGTCTGGAGGAAGCAAAGCGAGGTGCTCAAGCCATCAAAGATGCAGGCATGAAGTTTGATGTGTGCTACACTTCCGTTTTGAAGCGCGCTATCAAGACTCTGTGGACCATCATGGAGGTCACAGACCAGATGTGGCTGCCTGTAGTGCGCACCTGGCGTCTGAATGAACGTCACTACAGTGGTCTGACTGGTCTGAACAAGGCAGAGACGGCAGCCAAGCACGGAGAGGAGCAAGTCGAGGTCTGGCGCACATCATTTGATATTCCCCCTCCTCCTATGGATAAGGACCATCCATATCACAAGATCATCATCGAGTCAAGACGATACAAGGGTCTGAAAGAGGGTGAGCTACCCATCTGCGAGAGCTTGAAGGATACCATCTCTCGTGCCCTGC*CATTCTGGAAT Putative SNPs: 19T>A, 56A>G 40. 100 200 300 400 500 600 700 800 900 1000 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.... Cyprinus_Cluster8041.seq.Contig1 ATTTGTGAAGCTTGATTGCTCTGAATCTGGTGCTGATGATGGAGAGCGTGCAGCAGACGATCACGAGGGTCTCTCAGGAGCTGAACTGCAGTCCCACGTCCCTCAGGGTGGCAGAACATCTGGACCGACACGATGAGCTGCGACTGCTGCGCCAGGAGTTCCTCATACCTAAAATATCTGACCTGCCACCGTCGGATTTGTCACTTGTGGATGGTTCTGAAGATTGTATTTATTTCGCTGGGAATTCACTGGGTCTCCAGCCGAAAAACACCAAAAAATACATCGAAGAGGAGCTGGAGAAATGGGCCACAATTGGTGTCCATGGCCACCTGAAGGGGTCGCGACCTTGGGCCTGGGC*TGAGGATACCCTGGAGGAGCTGATGGCAAAAGATCGTTGGTGCTAAACCTGAGGAAGTGGTTTTGATGAATGGATTGACAGTCAATCTGCATCTTCTGATGCTTTCCTTCTACAAACCGTCTCCAAAACGCTATAAGATTCTTCTAGAAGACAAGGCCTTTCCATCAGACCACTACGCCATTGAATCTCAGATCCGGCTGAGAGGACTGGACG*TGACCGACAGCATGCTGATCATTAAACCAAGACAGGGTGAAGACACCATCAGGACAGAGGATATCGTGTCGGTCATCGAGCGGGAGGGCGACGCCATCGCTCTGGTCATGCTCAGCGGCGTTCAGTATTACACCGGTCAGCTCTTCAACATGGAGGCCATTACCAGTGCAGGACACGCCAAGGGGTGTTTGGTA*GGGTTTTGAATTGTGCACACGCCCGTAGGAAACGCTGAACTGCAACTTCACGACTGGAAATGTGGAATTTTGGCGTGGCTGGTGCTCTTATAAAGTATGTGAACTCAGGGGGCCCGGTGGTTTCTGGCTTGGGAGCTTATATTACATGAAGAAACACGCCTCACAGCCGTCCAGCCCACTCTGATGGGGCCTGGGTGGGGGACACCAACCTGAAGAACCAGAATTCTTCATTGAACCACGAAAATGGAGCTTTCCGCCCTGGGTGGTTAAAAGGAATTCCGTCTGGTCCAACCAGCCTGTTTTTAT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ gi|37559858|gb|CF662663.1|CF662663 ATTTGTGAAGCTTGATTGCTCTGAATCTGGTGCTGATGATGGAGAGCGTGCAGCAGACGATCACGAGGGTCTCTCAGGAGCTGAACTGCAGTCCCACGTCCCTCAGGGTGGCAGAACATCTGGACCGACACGATGAGCTGCGACTGCTGCGCCAGGAGTTCCTCATACCTAAAATATCTGACCTGCCACCGTCGGATTTGTCACTTGTGGATGGTTCTGAAGATTGTATTTATTTCGCTGGGAATTCACTGGGTCTCCAGCCGAAAAACACCAAAAAATACATCGAAGAGGAGCTGGAGAAATGGGCCACAATTGGTGTCCATGGCCACCTGAAGGGGTCGCGACCTTGGGCCTGGGC*TGAGGATACCCTGGAGGAGCTGATGGCAAAAGATCGTTGGTGCTAAACCTGAGGAAGTGGTTTTGATGAATGGATTGACAGTCAATCTGCATCTTCTGATGCTTTCCTTCTACAAACCGTCTCCAAAACGCTATAAGATTCTTCTAGAAGACAAGGCCTTTCCATCAGACCACTACGCCATTGAATCTCAGATCCGGCTGAGAGGACTGGACG*TGACCGACAGCATGCTGATCATTAAACCAAGACAGGGTGAAGACACCATCAGGACAGAGGATATCGTGTCGGTCATCGAGCGGGAGGGCGACGCCATCGCTCTGGTCATGCTCAGCGGCGTTCAGTATTACACCGGTCAGCTCTTCAACATGGAGGCCATTACCAGTGCAGGACACGCCAAGGGGTGTTGGNTAAGGGTTTTGAATTGTGCACACGCCCGTAGGAAACGCTGAACTGCAACTTCACGACTGGAAATGTGGAATTTTGGCGTGGCTGGTGCTCTTATAAAGTATGTGAACTCAGGGGGCCCGGTGGTTTCTGGCTTGGGAGCTTATATTACATGAAGAAACACGCCTCACAGCCGTCCAGCCCACTCTGATGGGGCCTGGGTGGGGGACACCAACCTGAAGAACCAGAATTCTTCATTGAACCACGAAAATGGAGCTTTCCGCCCTGGGTGGTTAAAAGGAATTCCGTCTGGTCCAACCAGCCTGTTTTTAT gi|50733142|gb|CO729448.1|CO729448 ATTTGTGAAGCTTGATTGCTCTGAATCTGGTGCTGATGATGGAGAGCGTGCAGCAGACGATCACGAGGGTCTCTCAGGAGCTGAACTGCAGTCCCACGTCCCTCAGGGTGGCAGAACATCTGGACCGACACGATGAGCTGCGACTGCTGCGCCAGGAGTTCCTCATACCTAAAATATCTGACCTGCCACCGTCGGATTTGTCACTTGTGGATGGTTCTGAAGATTGTATTTATTTCGCTGGGAATTCACTGGGTCTCCAGCCGAAAAACACCAAAAAATACATCGAAGAGGAGCTGGAGAAATGGGCCACAATTGGTGTCCATGGCCACCTGAAGGGGTCGCGACCTTGGGCCTGGGC*TGAGGATACCCTGGAGGAGCTGATGGCAAAAGATCGTTGGTGCTAAACCTGAGGAAGTGGTTTTGATGAATGGATTGACAGTCAATCTGCATCTTCTGATGCTTTCCTTCTACAAACCGTCTCCAAAACGCTATAAGATTCTTCTAGAAGACAAGGCCTTTCCATCAGACCACTACGCCATTGAATCTCAGATCCGGCTGAGAGGACTGGACG*TGACCGACAGCATGCTGATCATTAAACCAAGACAGGGTGAAGACACCATCAGGACAGAGGATATCGTGTCGGTCATCGAGCGGGAGGGCGACGCCATCGCTCTGGTCATGCTCAGCGGCGTTCAGTATTACACCGGTCAGCTCTTCAACATGGAGGCCATTACCAGTGCAGGACACGCCAAGGGGTG gi|50741230|gb|CF662339.2|CF662339 LLLAACATCTGGACCGACGCGATGATCTGCTACTGCTGCGCCAAGAGTTCCTCATACCTAAAATATCTGACCTGCCACCGACGGAATTGTCAATTGTGGATGGTTCTGAAGATTGCATTTCTTTCGCTGGGAATTCACTGGGTCTCCAGCCTAAAAACACCAAACAGTACATCGAAGAGGAGCTGGAGAAATGGGCCACAATTGGTGTCCATGGCCACCCGAAGGGGTCTCGACCTTGGGCCTGGGCATGAGGATACCCTGGAGGAGCTGATGGCAAAAGATCGTTGGTGCTCAACCTGAGGAAGTGGTTTTGATGAATGGATTGACAGTCAATCTGCATCTTCTGATGCGTTCCTTCTACAAACCGTCTCCAAAACGCTATAAGATTCTACTAGATGACAAGGCCTTTCCATCAGACCACTACGCCATTGAATCTCATATCCGGCTGAGAGGACTGGACG*TGACCGACATCATGCTGATCATTATACCACCACAAGGTGAACACACCATCAGGACTGATGATATCATGTCGGTCATCGAGCGGGAGGGCGACGCCATCTCTCTGGT gi|50739831|gb|CA966348.2|CA966348 TGAGGAAGTGGTTTTGATGAATGGATTGACAGTCAATCTGCATCTTCTGATGCTTTCCTTCTACAAACCGTCTCCAAAACGCTATAAGATTCTTCTAGAAGACAAGGCCTTTCCATCAGAGGGCTACGCCATTGAATCTCAGATCCGGCTGAGAGGACTGGACACTGACCGACAGCATGCTGATCATTAAACCAAGACAGGGTGAAGACACCATCAGGACAGAGGATATCGTGTCGGTCATCGAGCGGGAGGGCGACGCCATCGCTCTGGTCATGCTCAGCGGCGTTCAGTATTACACCGGTCAGCTCTTCTACATGGAGGCCATTACCAGGGCGGGACGCGCCAAGGGGTGTTTGGTA*GGGTTT*GA*TTGTGCACACGCC*GTAGGAAACGCTGAACTGCAACTTCACGACTGGAA*TGTGGA*TTTTG*CGTG*CTGGTGCTCTTATAA*GTATGTGAACTCAGGGG**CCGGTGGTLLLLL gi|50738227|gb|CA965032.2|CA965032 GACTGGACG*TGACCTACAGCATGCTGATCATTATACCAATACAGGGTGAAGACACCCTCAGGACATAGGATATCCTGTCGGTCATCGAGCGGGAGGGCGACGCCATCGCTCTGGTCATGCTCAGCGGCGTTCAGTATTACACCGGTCAGCTCTTCLLL Putative SNPs: 598A>T 41. 100 200 300 400 500 600 700 800 900 1000 1100 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.. Cyprinus_Cluster8048.seq.Contig1 GGGGGTTGTCCAAAGGAGAAAAATGGCGATGGGTTGCTTGTCAATGAGGAACACCGCGACTCCTGCAACATTAACCTGCAAAAGACG*GCGTGCTACAATGGTTCCCACGTTGTCTGGCGGATTCAGCAGAAGCGCTCTGCGGGTTTTATCCGTGGCGTTAATGTTGCAGGCAGTTTTAGGAGACGGAAAGACTCTCGTTCTGCTGGACAATCCTAACATCAGAGACACTCATTCAATCTTCTTCCGCAGTTTAGCAGATCGTGGGTTTGACCTTACATTTAAGACTGTTGATGATCCTGGTCTCTCTTTGATCAAGTATGGCCAGTTCCTCTACGACCATCTCATCATTTTCTCTCCATCAGTGGAAGATTTTGGGGGCAGCATCAATGTAGAGACCATTACAGCCTTCATTGACGGTGGAGGAAATGTTCTCGTTGCTGCCAGCTCTGATATTGGTGACCCTCTGAGAGAGCTAGGCAGTGAATGTGGGATTGAATTTGATGAGGAGAAAACTGCTGTCATTGACCACCATAACTATGACGTTTCTGATCCTGGTGAGCACACCCTGATTGTTGCAGACCCAGAGAATCTTCTTAAATCCCCAACTATAGTTGGCAAGCCCACTGATAAACCAGTCCTGTTCAAAGGTGTTGGCATGGTGGCTGATCCAGATAACTCTCTGGTGCTGGACATTCTGACAGGATCCTCCACCTCTTACTCCTACTTCCCGGATCGCCCCATCACACAGTATCCTCATGCGGTTGGAAAGAACACCCTCCTGATCGCCGGTCTGCAGGCAAGAAACAATGCACGTGTGGTTTTCAGCGGGTCACTGCACTTCTTCAGTGATGCTTTCTTCAACTCCCCTGTGCAGAAGGCTGCCTCTGGGTCAAAGAGGTATGAACAGACTGGTAACCAGGAGCTGGCTGAGGCCCTGTCTCGCTGGGTGTTTAAGGAGGCTGGTGTTCTGAGGGTTGGGGCTGTTACCCATCATCCAGTTGGAGAGAGTACTCCACCTGCTGCCTACACCAGCACTGACCTTGTGGAATACAGCATTGTGATTGAGATGTTGTCTGGTGGAAAGTGGGTGCCTTTTGATGGAGATGACATCCAGCTGGAATTTGTCAGAATTGATCCATTT -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|109281765|gb|EC393440.1|EC393440 GGGGGTTGTCCAAAGGAGAAAAATGGCGATGGGTTGCTTGTCAATGAGGGACACTGCGACTCCTGCAACATTAACCTGCAAAAGACGAGC*TGCTACAATGGTCCCCACGTCGTCTGGTGGGTTCAGCAGCAGCGCTCTGTTTGTTTTATCCGTGGCGTTAATGTTGCAGGCAGTTTTAGGAGACGGAAAGACTCTCGTTCTGCTGGACAATCCTAACATCAGAGACACTCATTCAATCTTCTTCCGCAGTTTAGCAGATCGTGGGTTTGACCTTACCTTCAAGACTGCTGATGATCCTGGTCTCTCTTTGATCAAGTATGGCCAGTTCCTCTACGACCATCTCATCATTTTCTCTCCATCAGTGGAAGATTTTGGGGGCAACATCAATGTAGAGACCATTACAGCCTTCATTGACGGTGGAGGGAATGTTCTCGTTGCTGCCAGCTCTGATATTGGTGACCCTTTGAGAGAGCTAGGCAGTGAATGTGGGATTGAATTTGATGAGGAGAAAACTGCTGTTATTGATCACCATAACTATGACGTTTCTGATCCTGGTGAGCACACCCTGATTGTCGCAGACCCAGAGAATCTTCTNTAATCCCCAACTATAGTTGGCAAGCCCACTGATAAACCAGTCCTGTTCAAAGGTGTTGGCATGGTGGCTGATCCAGATAACTCTCTGGTGCTGGACATTCTGACAGGATCCT gi|109281360|gb|EC393235.1|EC393235 GGGGGTTGTCCAAAGGAGGAAAATGGCGATGGGTTGCTTGTCAATGAGGAACACCGCGACTCCTGCAACATTAACCTGCAAAAGACG*GCGTGCTACAATGGTTCCCACGTTGTCTGGCGGATTCAGCAGAAGCGCTCTGCTGGTTTTATCCGTGGCGTTAATGTTGCAGGCAGTTTTAGGAGACGGAAAGACTCTCGTTCTGCTGGACAATCCTAACATCAGAGACACTCATTCAATCTTCTTCCGCAGTTTAGCAGATCGTGGGTTTGACCTTACATTTAAGACTGTTGATGATCCTGGTCTCTCTTTGATCAGGTATGGCCAGTTCCTCTACGACCATCTCATCATTTTCTCTCCATCAGTGGAAGATTTTGGGGGCAGCATCAATGTAGAGACCATTACAGCCTTCATTGACGGTGGAGGAAATGTTCTCGTTGCTGCCAGCTCTGATATTGGTGACCCTCTGAGAGAGCTAGGCAGTGAATGTGGGATTAAATTTGATGAGGAGAAAACTGCTGTCATTGACCACCATAACTATGACGTTTCTGATCCTGGTGAGCACACCCTGATTGTTGCAGATCCAGAGAATCTTCTTAAAGCCCCAACTATAGTTGGCAAGCCCACTAATAAACCAGTCCTGTTCAAAGGTGTTGGCATGGTGGCTGATCCAGATAACTCTCTGGTGCTGGACATTCT gi|50736427|gb|CA969976.2|CA969976 LLLLLLLLLLLAAATGGCGATGGGTTGCTTGTCAATGAGGAACACCGCGACTCCTGCAACATTAACCTGCAAAAGACG*GCGTGCTACAATGGTTCCCACGTTGTCTGGCGGATTCAGCAGAAGCGCTCTGCGGGTTTTATCCGTGACGTTAATGTTGCAGGCAGTTTTAGGAGACGGAAAGACTCTCGTTCTGCTGGACAATCCTAACATCAGAGACACTCATTCAATCTTCTTCCGCAGTTTAGCAGATCGTGGGTTTGACCTTACATTTAAGACTGTTGATGATCCTGGTCTCTCTTTGATCAAGTATGGCCAGTTCCTCTACGACCATCTCATCATTTTCTCTCCATCAGTGGAAGATTTTGGGGGCAGCATCAATGTAGAGACCATTACAGCCTTCATTGACGGTGGAGGAAATGTTCTCGTTGCTGCCAGCTCTGATATTGGTGACCCTCTGAGAGAGCTAGGCAGTGAATGTGGGATTGAATTTGATGAGGAGAAAACTGCTGTCATTGACCACCATAACTATGACGTTTCTGATCCTGGTGAGCACACCCTGATTGTTG gi|50733785|gb|CA967740.2|CA967740 LLLGGTGGAGGAAATGTTCTCGTTGCTGCCAGCTCTGATATTGGAGACCCTCTGAGAGAGCTAGGCAGTGAATGTGGGATTGAATTTGATGAGGAGAAAACT gi|109280663|gb|EC392874.1|EC392874 LLLGGGATTGAATTTGATGAGGAGAAAACTGCTGTTATTAATCACCATAACTATGACGTTTCTGATCCTGGTGAGCACACCCTGATTGTTGCAGACCCAGAGAATCTTCTTAAATCCCCAACTATAGTTGGCAAGCCCACTGATAAACCAGTCCTGTTCAAAGGTGTTGGCATGGTGGCTGATCCAGATAACTCTCTGGTGCTGGACATTCTGACAGGATCCTCCACCTCTTACTCCTACTTCCCGGATCGCCCCATCACACAGTATCCTCATGCGGTTGGAAAGAACACCCTCCTGATCGCCGGTCTGCAGGCAAGAAACAATGCACGTGTGGTTTTCAGCGGGTCACTGCACTTCTTCAGTGATGCTTTCTTCAACTCCCCTGTGCAGAAGGCTGCCTCTGGGTCAAAGAGGTATGAACAGACTGGTAACCAGGAGCTGGCTGAGGCCCTGTCTCGCTGGGTGTTTAAGGAGGCTGGTGTTCTGAGGGTTGGGGCTGTTACCCATCATCCAGTTGGAGAGAGTACTCCACCTGCTGCCTACACCAGCACTGACCTTGTGGAATACAGCATTGTGATTGAGATGTTGTCTGGTGGAAAGTGGGTGCCTTTTGATGGAGATGACATCCAGCTGGAATTTGTCAGAATTGATCCATTT Putative SNPs: 521T>C, 527T>C 42. 100 200 300 400 500 600 700 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.. Cyprinus_Cluster8050.seq.Contig1 GGGGGGATGAGAGGTGAACTAAACTGGAGAGAAGTGCTCCTTCAAGGAAGGCAACGGGAAGTGGCCACCGACGGACTTATTCGTTGACCAAAGTCTGCAATCGGACATTTATGACTGCAGTTCTTCATCGCAGTTGAGACCCCCCCTCAAACAGGCTCATTTCCCGCCCACTGGAGCGAGTTTTGTCGCTGTGGAAGTGGACTCGGTACTTCTCCCGCTGCTAGTTAGCGAGCTAGCTCGTCTAGTTCGTTGATGCGTGGATTTGACAGCCACACCATCGTTTTTTT*CGGTCAATGCCATATAAACAAAGGCCGTTTACGACTGAGAACAGATCAGAACGTGTCCCGGCAGTAGGAGTGAGGCTGAGCTTTAGAAGAGGAAAATGAGTGAACTGGACCAGTTACGCCAGGAGGCCGAGCAGCTGAAGAACCAGATCAGAGATGCAAGGAAAGCTTGTGCAGATGCCACACTATCACAGATCACAGCCAACATCGACCCTGTTGGCCGAATCCAGATGCGCACAAGAAGAACACTGCGAGGACATCTGGCTAAAATCTACGCCATGCACTGGGGCACCGATTCCAGGCTGCTCGTCAGTGCCTCCCAGGATGGAAAACTCATTATTTGGGACAGTTATACCACAAATAAGGTCCACGCCATTCCTCTGCGCTCCTCCTGGGTGATGACCTGTGCCTACGCTCCTTCAGGGAATTATGTTGCT -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|109281080|gb|EC393091.1|EC393091 GGGGGGATGAGAGGTGAACTAAACTGGAGAGAAGTGCTCCTTCAAGGAAGGCAACGGGAAGTGGCCACCGACGGACTTATTCGTTGACCAAAGTCTGCAATCGGACATTTATGACTGCAGTTCTTCATCGCAGTTGAGACCCCCCCTCAAACAGGCTCATTTCCCGCCCACTGGAGCGAGTTTTGTCGCTGTGGAAGTGGACTCGGTACTTCTCCCGCTGCTAGTTAGCGAGCTAGCTCGTCTAGTTCGTTGATGCGTGGATTTGACAGCCACACCATCGTTTTTTT*CGGTCAATGCCATATAAACAAAGGCCTTTTACGACTGAGAACAGATCAGAACGTGTCCCGGCAGTAGGAGTGAGGCTGAGCTTTAGAAGAGGAAAATGAGTGAACTGGACCAGTTACGCCAGGAGGCCGAGCAGCTGAAGAACCAGATCAGAGATGCAAGGAAAGCTTGTGCAGATGCCACACTATCACAGATCACAGCCAACATCGACCCTGTTGGCCGAATCCAGATGCGCACAAGAAGAACACTGCGAGGACATCTGGCTAAAATCTACGCCATGCACTGGGGCACCGATTCCAGGCTGCTCGTCAGTGCCTCCCAGGATGGAAAACTCATTATTTGGGACAGTTATACCACAAATAAGGTCCACGCCATTCCTCTGCGCTCCTCCTGGGTGATGACCTGTGCCTACGCTCCTTCAGGGAATTATGTTGCT gi|109280455|gb|EC392769.1|EC392769 GGGGGGATGAGAGGTGAACTAAACTGGAGAGAAGTGCTCCTTCAAGGAAGGCAACGGGAAGTGGCCACCGACGGACTTATTCGTTGACCAAAGTCTGCAATCGGACATTTATGACTGCAGTTCTTCATCGCAGTTGAGACCCCCCCTCAAACAGGCTCATTTCCCGCCCACTGGAGCGAGTTTTGTCGCTGTGGAAGTGGACTCGGTACTTCTCCCGCTGCTAGTTAGCGAGCTAGCTCGTCTAGTTCGTTGATGCGTGGATTTGACAGCCACACCAGCGTTTTTTTTCGGTCAATGCCATATAAACAAAGGCCTTTTACGACTGAGAACAGATCAGAACGTGTCCCGGCAGTAGGAGTGAGGCTGAGCTTTAGAAGAGGAAAATGAGTGAACTGGACCAGTTACGCCAGGAGGCCGAGCAGCTGAAGAACCAGATCAGAGATGCAAGGAAAGCTTGTGCAGATGCCACACTATCACAGATCACAGCCAACATCGACCCTGTTGGCCGAATCCAGATGCGCACAAGAAGAACACTGCGAGGACATCTGGCTAAAATCTACGCCATGCACTGGGGCACCGATTCCAGGCTGCTCGTCAGTGCCTCCCAGGATGGAAAACTCATTATTTGGGACAGTTATACCACAAATAAGGTCCACGCCATTCCTCTGCGCTCCTCC gi|109281688|gb|EC393400.1|EC393400 GGGGGATGAGAGGTGAACTAAACTGGAGAGAAGTGCTCCTTCAAGGAAGGCAACGGGAAGTGGCCACCGACGGACTTATTCGTTGACCAAAGTCTGCAATCGGACATTTATGACTGCAGTTCTTCATCGCAGTTGAGACCCCCCCTCAAACAGGCTCATTTCCCGCCCACTGGAGCGAGTTTTGTCGCTGTGGAAGTGGACTCGGTACTTCTCCCGCTGCTAGTTAGCGAGCTAGCTCGTCTAGTTCGTTGATGCGTGGATTTGACAGCCACACCATCGTTTTTTT*CGGTCAATGCCATATAAACAAAGGCCTTTTACGACTGAGAACAGATCAGAACGTGTCCCGGCAGTAGGAGTGAGGCTGAGCTTTAGAAGAGGAAAATGAGTGAACTGGACCAGTTACGCCAGGAGGCCGAGCAGCTGAAGAACCAGATCAGAGATGCAAGGAAAGCTTGTGCAGATGCCACACTATCACAGATCACGGCCAACATCGACCCTGTTGGCCGAATCCAGATGCGCACAAGAAGAACACTGCGAGGACATCTGGCTAAAATCTACGCCATGCACTGGGGCACCGATTCCAGGCTGCTCGTCAGTGCCTCCCAGGATGGAAAACTCATTATTTGGGACAGTTATACCACAAATAAGGTCCACGCCATTCCTCTGCGCTCCTCCTGG*TGATGACCTGTGCCTA gi|109281263|gb|EC393185.1|EC393185 LLLLGAACTAAACTGGAGAGAAGTGCTCCTTCAAGGAAGGCAACGGGAAGTGGCCACCGACGGACTTATTCGTTGACCAAAGTCTGCAATCAGACATTTATGACTGCAGTTCTTCATCGCAGTTGAGACCCCCCCTCAAACAGGCTCATTTCCCGCCCACTGGAGCGAGTTTTGTCGCTGTGGAAGTGGACTCGGTACTTCTCCCGCTGCTAGTTAGCGAGCTAGCTCGTCTAGTTCGTTGATGCGTGGATTTGACAGCCACACCATCGTTTTTTT*CGGTCAATGCCATATAAACAAAGGCCGTTTACGACTGAGAACAGATCAGAACGTGTCCCGGCAGTAGGAGTGAGGCTGAGCTTTAGAAGAGGAAAATGAGTGAACTGGACCAGTTACGCCAGGAGGCCGAGCAGCTGAAGAACCAGATCAGAGATGCAAGGAAAGCTTGTGCAGATGCCACACTATCACAGATCACAGCCAACATCGACCCTGTTGGCCGAATCCAGATGCGCACAAGAAGAACACTGCGAGGACATCTGGCTAAAATCTACGCCATGCACTGGGGCACCGATTCCAGGCTGCTCGTCAGTGCCTCCCAGGATGGAAAACTCATTATTTGGGACAGTTATACCGCAAATAAGGTCCACGCCATTCCTCTGCGCTCCTCCTGGGTGATGACCTGTGCCTACGCTCCTTCAG gi|109280921|gb|EC393010.1|EC393010 LLLLGAACTAAACTGGAGAGAAGTGCTCCTTCAAGGAAGGCAACGGGAAGTGGCCACCGACGGACTTATTCGTTGACCAAAGTCTGCAATCAGACATTTATGACTGCAGTTCTTCATCGCAGTTGAGACCCCCCCTCAAACAGGCTCATTTCCCGCCCACTGGAGCGAGTTTTGTCGCTGTGGAAGTGGACTCGGTACTTCTCCCGCTGCTAGTTAGCGAGCTAGCTCGTCTAGTTCGTTGATGCGTGGATTTGACAGCCACACCATCGTTTTTTT*CGGTCAATGCCATATAAACAAAGGCCGTTTACGACTGAGAACAGATCAGAACGTGTCCCGGCAGTAGGAGTGAGGCTGAGCTTTAGAAGAGGAAAATGAGTGAACTGGACCAGTTACGCCAGGAGGCCGAGCAGCTGAAGAACCAGATCAGAGLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL Putative SNPs: 103G>A, 315T>G 43. 100 200 300 400 500 600 700 800 900 1000 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+...... Cyprinus_Cluster8052.seq.Contig2 GGGCTCACTCACTCTCACCGTGCTCAGCGGCTCTCACTGCTCTTCTTGCAGCTAAGGATACTTATTTAACATTCCTACAACAAATCGTGATCATGGCCTCAGTAATGCAGAAGCTGATCACCCCTCTGGCCAGCGGCCCCGCTGAGCCCCCCAGGAACAAAGTCACAATTGTTGGCGTGGGGCAGGTGGGCATGGCATGTGCCGTCAGCATCCTGCTCCGGGAGCTTGCAGATGAACTGGCTCTGGTGGATGTTGTGGAGGATAGACTGAAGGGGGAGATGCTGGATCTGCAACATGGCAGCCTTTTCCTCAAGACCCCTAAGATTGTGGCTGATAAGGACTACTCTGTGACTGCTAACTCTCGTATCGTGGTGGTGACGGCCGGAGTGCGTCAACAGGAGGGTGAGAGCAGATTGAACCTGGTGCAGAGGAACGTCAACATTTTCAAACACATCATCCCTCAGATTGTCAAATACAGTCCTGACTGCACCCTCATTGTGGTGTCCAATCCAGTGGATGT*TTTGACCTACGTGACATGGAAGCTGAGCGGCCTGCCAAAGCACCGTGTCATCGGCAGCGGGACCAACCTGGACTCCGCTCGTTTCCGCTACATCATGGCTGAGAAACTAGGCATCCACTCCAGCAGCTTCAACGGCTACATCCTGGGAGAGCACGGAGACTCCAGCGTGCCTGTATGGAGTGGAGTAAATGTGGCTGGAGTGAGCCTGCAGAAACTCAACCCTGACATCGGCACAGATAAAGACAGCGAGAACTGGAAGGAAGCTCACAAGATGGTTGTGGACAGTGCCTACTAAGTGATCAGGCTGAAGGGATACACTAACTGGGCCATCGGCCTCAGT*GTGGCCGACCTGACCGAGACCCTGGTGAAGAACCTGAACAGGGTCCACCCTGTCTCCACCATGGTGAAGGGCATGTATGGTATTGGTGAGGAGGTGTACCTGAACCTGCCCTGTGTGCTGAACAGCAGCGGAGTGGGCAGCGTTATCAACATGACCCTGACCGATGAAGAAATCGCTCAGCTGAAGAAGAGCGCGGATACTCTGTGGGGGATCC -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|50742297|gb|CF660439.2|CF660439 GGGCTCACTCACTCTCACCGTGCTCAGCGGCTCTCACTGCTCTTCTTGCAGCTAAGGATACTTATTTAACATTCCTACAACAAATCGTGATCATGGCCTCAGTAATGCAGAAGCTGATCACCCCTCTGGCCAGCGGCCCCGCTGAGCCCCCCAGGAACAAAGTCACAATTGTTGGCGTGGGGCAGGTGGGCATGGCATGTGCCGTCAGCATCCTGCTCCGGGAGCTTGCAGATGAACTGGCTCTGGTGGATGTTGTGGAGGATAGACTGAAGGGGGAGATGCTGGATCTGCAACATGGCAGCCTTTTCCTCAAGACCCCTAAGATTGTGGCTGATAAGGACTACTCTGTGACTGCTAACTCTCGTATCGTGGTGGTGACGGCCGGAGTGCGTCAACAGGAGGGTGAGAGCAGATTGAACCTGGTGCAGAGGAACGTCAACATTTTCAAACACATCATCCCTCAGATTGTCAAATACAGTCCTGACTGCACCCTCATTGTGGTGTCCAATCCAGTGGATGT*TTTGACCTACGTGACATGGAAGCTGAGCGGCCTGCCAAAGCACCGTGTCATCGGCAGCGGGACCAACCTGGACTCCGCTCGTTTCCGCTACATCATGGCTGAGAAACTAGGCATCCACTCCAGCAGCTTCAACGGCTACATCCTGGGAGAGCACGGAGACTCCAGCGTGCCTGTATGGAGTGGAGTAAATGTGGCTGGAGTGAGCCTGCAGAAACTCAACCCTGACATCGGCACAGATAAAGACAGCGAGAACTGGAAGGAAGCTCACAAGATGGTTGTGGACAGTGCCT gi|50743263|gb|CF661066.2|CF661066 AGCTAAGGATACTTATTTAACATTCCTACAACAAACCTTGATCATGGCCTCAGTAATGCAGAAGCTGATCACCCCTCTGGCCAGCGGCCCCGCTGAGCCCCCCAGGAACAAAGTCACAATTGTTGGCGTGGGGCAGGTGGGCATGGCATGTGCCGTCAGCATCCTGCTCCGGGAGCTTGCAGATGAACTGGCTCTGGTGGATGTTGTGGAGGATAGACTGAAGGGGGAGATGCTGGATCTGCAACATGGCAGCCTTTTCCTCAAGACCCCTAAGATTGTGGCTGATAAGGACTACTCTGTGACTGCTAACTCTCGTATCGTGGTGGTGACGGCCGGAGTGCGTCAACAGGAGGGTGAGAGCAGATTGAACCTGGTGCAGAGGAACGTCAACATTTTCAAACACATCATCCCTCAGATTGTCAAATACAGTCCTGACTGCACCCTCATTGTGGTGTCCAATCCAGTGGATGT*TTTGACCTACGTGACATGGAAGCTGAGCGGCCTGCCAAAGCACCGTGTCATCGGCAGCGGGACCAACCTGGACTCCGCTCGTTTCCGCTACATCATGGCTGAGAAACTAGGCATCCACTCCAGCAGCTTCAACGGCTACATCCTGGGAGAGCACGGAGACTCCAGCGTGCCTGTATGGAGTGGAGTAAATGTGGCTGGAGTGAGCCTGCAGAAACTCAACCCTGACATCGGCACAGATAAAGACAGCGAGAACTGGAAGGAAGCTCACAAGATGGTTGTGGACAGTG gi|28465816|gb|AU301089.1|AU301089 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLGTCAAATACAGTCCTGACTGCACCCTCATTGTGGTGTCCAATCCAGTGGATGTGTTTGACCTACGTGACCTGGAAGCTGAGCGGCCTGCCAAAGCACCGTGTCATCGGCAGCGGGACCAACCTGGACTCTGCTCGCTTCCGCCACATCATGGCCGAGAAATTGGGCATCCACTCCAGCAGCTTCAACGGTTATATCCTGGGAGAGCACGGAGACTCCAGTGTGCCTGTGTGGAGCGGAGCAAATGTTGCTGGAGTCAGCCTGCAGAAACTCAACCCTGACATCGGCACAGATAAAGACAGCGAGAACTGGAAGGACGCTCACAAGATGGTTGTGGACAGTGCTTATGAAGTGATCAAGCTGA*GGGTTACACTAACTGGGCCATCGGC*TCAGTTGTGGCCGACCTGACCGAGACCCTGGTGAAGAAC*TGAACAGGGTCCACC*TGTCTCCACCATGGTGAAGGGCATGTATGGTATCGGCGAGGAGGTGTACCTCAGCATGCCCTGTGTGCTGAACAGCAGCGGAGTGGGCAGCGTTATCAACATGACCCTGACCGATGAAGAAATCGCTCAGCTGAAGAAGAGCGCGGATACTCTGTGGGGGATCC gi|50735035|gb|CA968812.2|CA968812 CGGCCTGCCAA*GCACCGTGTCATCGGCAGCGGGACCAACCTGGACTCCGCTCGTTTCCGCTACATCATGGCTGAGAAACTAGGCATCCACTCCAGCAGCTTCAACGGTTACATCCTGGGAGAGCACGGAGACTCCAACGTGCCTGTATGGAGTGGAGTAAATGTGGCTGGAGTGAGCCTGCATAAACTCATCCCTGACATCGGCACAGATAAAGACAGCGAGAACTGGAAGGAAGCTCACAAGATGGTTGTGGACAGTGCCTACTAAGTGATCAGGCTGAAGGGATACACTAACTGGGCCATCGGCCTCAGT*GTGGCCGACCTGACCGAGACCCTGGTGAAGAACCTGAACAGGGTCCACCCTGTCTCCACCATGGTGAAGGGCATGTATGGTATTGGTGAGGAGGTGTACCTGAACCTGCCCTGTGTGCTGAACAG Putative SNPs: 657C>T 44. 100 200 300 400 500 600 700 800 900 1000 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+. Cyprinus_Cluster8123.seq.Contig1 TTCAAAAAAACACCCGCCCCATTCCAACCTATCCCCCCTTTGCCGATTATTATTCGATGCCCACCGTTTCCCCCGGAAAACGGCATGAGACCACAAAATATTTGGTTTTCTCATCTTTGCCCCCCCAGCTTACCCTTATTCTCCCGCTCTAATTTGTGTGCACTCTGTCGGATACCAATTCACCCGGAAACGGTTTGACCATTCTTACGCCACTCTATAATACGAATATCGCCAATTTAGTATATACTTGACTAATTTTCTTAACTATTATCCCAACTAAAATCTTAAGCCATATTTCACCACATGGACCAACTCCAGTAAGTGCTGAAAAACACAAAACTGAATCCTGAGACTGACCATGATAGTAAGCTTTTTCGACCAATTTGCAAGCCCATCATATCTAGGAATTCCCCTAATTGCTGTCGCAATCGCACTACCCTGAGTACTTTACCCAACCCCACCAGCTCGATGAATTAATAACCGGCTCATCACGATCCAAGGATGATTTATCAACCGATTTACTAACCAACTAATACTACCACTAAATGTAGGAGGACATAAATGAGCACTACTACTAGCCTCATTAATAATTTTCCTAATTACAATTAATATGCTTGGCTTACTACCGTACACCTTCACACCCACAACACAACTATCACTCAATATGGGATTTGCCGTGCCTCTATGACTCGCTACTGTAATTATTGGGATACGAAATCAACCAACAATTGCCCTAGGACACCTACTACCAGAAGGAACACCCATTCCACTGATCCCCGTACTAATTATCATCGAAACAATTAGCTTACTTATCCGCCCATTAGCCCTGGGAGTCCGACTAACAGCCAATCTAACCGCAGGTCACCTATTAATCCAACTCATCGCCACAGCTGTATTTGTTCTCC*TACCAATAATACCAACAGTAGCAATCCTAACCGCTGCCGTACTCTTCCTCCTCACATTACTAGAAGTTGCAGTAGCAATAATCCAAGCTTATGTATTTGTACTTCTTCTAAGCCTATATCTACAAGAAAACGGTT --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|56145713|gb|AU312524.1|AU312524 TTCAAAAAAACACCCGCCCCATTCCAACCTATCCCCCCTTTGCCGATTATTATTCGATGCCCACCGTTTCCCCCGGAAAACGGCATGAGACCACAAAATATTTGGTTTTCTCATCTTTGCCCCCCCAGCTTACCCTTATTCTCCCGCTCTAATTTGTGTGCACTCTGTCGGATACCAATTCACCCGGAAACGGTTTGACCATTCTTACGCCACTCTATAATACGAATATCGCCAATTTAGTATATACTTGACTAATTTTCTTAACTATTATCCCAACTAAAATCTTAAGCCATATTTCACCACATGGACCAACTCCAGTAAGTGCTGAAAAACACAAAACTGAATCCTGAGACTGACCATGATAGTAAGCTTTT*CGACCAATTTGCAAGCCCATCATATCTAGGAATTCCCCTAATTG*TATCGCAATCGCACTACCCTGAGTACTTTACCCAACCCCACCAACTCGATGAATTAATAACCGGCTCATCACGATCCAAGGATGATTTATCAACCGATTTACTAACCAACTAATACTACCACTAAATGTAGGAGGACATAAATGAGCGCTACTACTAGCCTCATTAATAATTTTCCTAATTACAATTAATATGCTTGGCTTACTACCGTATACCTTCACACCCACAACACAACTATCACTCAATATGGGATTTGCCGTACCTCTATGACTCGCTACTGTAATTATTGGGATACGAAATCAACCAACAGTTGCCCTAGGACACCTACTACCAGAAGGAACACCCATTCCACTGATCCCAGTACTAATTATCATCGAAACAATTAGCCTATTTATCCGCCCATTAGCCCTGGGAGTCCGACTAACAGCCAATCTAACCGCAGGTCACCTATTAATCCAACTCATCGCCACAGCTGTATTTGTTCTCC*TACCAATAATACCAACAGTAGCAATCCTAACCGCTGCCGTACTCTTCCCCCTCACATTACTAGAAGTTGCAGTAGCAATAATCCAAGCTTATGTATTTGTACTTCTTCTAAGCCTATATCTACAAGAAAACGLL gi|17976359|gb|AU240346.1|AU240346 AGTAAGTGCTGAAAAACACAAAACTGAATCCTGAGACTGACCATGATAGTAAGCTTTTTCGACCAATTTGCAAGCCCATCATATCTAGGAATTCCCCTAATTGCTGTCGCAATCGCACTACCCTGAGTACTTTACCCAACCCCACCAGCTCGATGAATTAATAACCGGCTCATCACGATCCAAGGATGATTTATCAACCGATTTACTAACCAACTAATACTACCACTAAATGTAGGAGGACATAAATGAGCACTACTACTAGCCTCATTAATAATTTTCCTAATTACAATTAATATGCTTGGCTTACTACCGTACACCTTCACACCCACAACACAACTATCACTCAATATGGGATTTGCCGTGCCTCTATGACTCGCTACTGTAATTATTGGGATACGAAATCAACCAACAATTGCCCTAGGACACCTACTACCAGAAGGAACACCCATTCCACTGATCCCCGTACTAATTATCATCGAAACAATTAGCTTACTTATC gi|56145725|gb|AU312536.1|AU312536 ATTTACTAACCAACTAATACTACCACTAAATGTAGGAGGACATAAATGAGCGCTACTACTAGCCTCATTAATAATTTTCCTAATTACAATTAATATGCTTGGCTTACTACCGTATACCTTCACACCCACAACACAACTATCACTCAATATGGGATTTGCCGTACCTCTATGACTCGCTACTGTAATTATTGGGATACGAAATCAACCAACAGTTGCCCTAGGACACCTACTACCAGAAGGAACACCCATTCCACTGATCCCAGTACTAATTATCATCGAAACAATTAGCCTATTTATCCGCCCATTAGCCCTGGGAGTCCGACTAACAGCCAATCTAACCGCAGGG*ACCTATTAATCCAACTCATCGCCACAGCTGTATTTGTTCTCCCTACCAATAATACCAACAGTAGCAATCCTAACCGCTGGCGTACTCTTCCTCCTCACATTACTAGAAGTTGCAGTAGCAATAATCCAAGCCTATGTATTTGTACTTCTTCTAAGCCTATATCTACAAGAAAACGGTT gi|17976365|gb|AU240352.1|AU240352 TTACTAACCAACTAATACTACCACTAAATGTAGGAGGACATAAATGAGCACTACTACTAGCCTCATTAATAATTTTCCTAATTACAATTAATATGCTTGGCTTACTACCGTACACCTTCACACCCACAACACAACTATCACTCAATATGGGATTTGCCGTGCCTCTATGACTCGCTACTGTAATTATTGGGATACGAAATCAACCAACAATTGCCCTAGGACACCTACTACCAGAAGGAACACCCATTCCACTGATCCCCGTACTAATTATCATCGAAACAATTAGCTTACTTATCCGCCCATTAGCCCTGGGAGTCCGACTAACAGCCAATCTAACCGCAGGTCACCTATTAATCCAACTCATCGCCACAGCTGTATTTGTTCTCC*TACCAATAATACCAACAGTAGCAATCCTAACCGCTGCCGTACTCTTCCTCCTCACATTACTAGAAGTTGCAGTAGCAATAATCCAAGCTTATGTATTTGTACTTCTTCTAAGCCTATATCTACAAGAAAACGLLL gi|28915953|gb|AU301167.1|AU301167 LTGAGCACTACTACTAGCCTCATTAATAATTTTCCTAATTACAATTAATATGCTTGGCTTACTACCGTACACCTTCACACCCACAACACAACTATCACTCAATATGGGATTTGCCGTGCCTCTATGACTCGCTACTGTAATTATTGGGATACGAAATCAACCAACAATTGCCCTAGGACACCTACTACCAGAAGGAACACCCATTCCACTGATCCCCGTACTAATTATCATCGAAACAATTAGCTTACT Putative SNPs: 568G>A, 631T>C, 679A>G, 728G>A, 778A>C, 806C>T, 809T>C 45. 100 200 300 400 500 600 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+... Cyprinus_Cluster8142.seq.Contig1 GGGGAAAACTGCTGGCCCTGGAACTGCAGCTGGCCATTTACCAACCCCTCCTGGCCCATGACGGTACACCCTGAGCCCAGGTACTCCTTTGCATCCACCTCCTGCTTGATGTGAGGCATCCCAGTAAAGCTGCCCTTGCGACCATCCTGCATGCTGGGGTGAGGGAGTGGGAACTTGAAGGCTGAGTAGGTATACTTTGCGCCGGTGCTTTCGAGGAGCTGCTTTAGCTCGGACACTGGGTCGCTACCGTCTTGGGATGGGTTAACAAAACGAGGCTGGGAATCAGTGTTCACCGTCATCCATGGGTTCCGAGGGGAGCTTTTCTGGCAGCTTCCATCTGTACCCGGGTTCCACTGCTGGGGTCGGAGATTGGGGGTCGATGGGTGTATGCTTGCAAATGGGGACTTGGAGGATGGGTATGTGGAAGCATAGTGAGATGGGCTAGATAAAATGTTTGGTGCAGGGGCCTCACCCTGAGACTGAGGTCTCTGCTGATCCCATGACAGCTCCTTTTGAGGATAATGTCCTAGAGGGATGGACTGTGGCATAGCAGAGGAGGACAAAAGAGGACCAGGTGATGAAGAGACCACTTGTGGCATACTCTGCGGGTAGGAGGTTGGCAGATGCTGATGGTGATTTGCAGGTGAAGATGCGCCTGGAGAAACAACAGTTTGTGGGTCAGTGGCAGACAAC --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|109284551|gb|EC394898.1|EC394898 GGGGAAAACCGCTGGCCCTGGAACTGCAGCTGGCCATTTACCAACCCCTCCTGGCCCATGACGGTACACCCTGAGCCCAGGTACTCCTTTGCATCCACCTCCTGCTTGATGTGAGGCATCCCAGTAAAGCTGCCCTTGCGACCATCCTGCATGCTGGGGTGAGGGAGTGGGAACTTGAAGGCTGAGTAGGTATACTTTGCGCCGGTGCTTTCGAGGAGCTGCTTTAGCTCGGACACTGGGTCGCTACCGTCTTGGGATGGGTTAACAAAACGAGGCTGGGAATCAGTGTTCACCGTCATCCATGGGTTCCGAGGGGAGCTTTTCTGGCAGCTTCCATCTGTACCCGGGTTCCACTGCTGGGGTCGGAGATTGGGGGTCGATGGGTGTATGCTTGCAAATGGGGACTTGGAGGATGGGTATGTGGAAGCATAGTGAGATGGGCTAGATAAAATGTTTGGTGCAGGGGCCTCACCCTGAGACTGAGGTCTCTGCTGATCCCATGACAGCTCCTTTTGAGGATAATGTCCTAGAGGGATGGACTGTGGCATAGCAGAGGAGGACAAAAGAGGACCAGGTGATGAAGAGACCACTTGTGGCATACTCTGCGGGT gi|109280541|gb|EC392812.1|EC392812 GGGGAAAACTGCTGGCCCTGGAACTGCAGCTGGCCATTTACCAACCCCTCCTGGCCCATGACGGTACACCCTGAGCCCAGGTACTCCTTTGCATCCACCTCCTGCTTGATGTGAGGCATCCCAGTAAAGCTGCCCTTGCGACCATCCTGCATGCTGGGGTGAGGGAGTGGGAACTTGAAGGCTGAGTAGGTATACTTTGCGCCGGTGTTTTCGAGGAGCTGCTTTAGCTCGGACACTGGGTCGCTACCGTCTTGGGATGGGTTAACAAAACGAGGCTGGGAATCAGTGTTCACCGTCATCCATGGGTTCCGAGGGGAGCTTTTCTGGCAGCTTCCATCTGTACCCGGGTTCCACTGCTGGGGTCGGAGATTGGGGGTCGATGGGTGTATGCTTGCAAATGGGGACTTGGAGGATGGGTATGTGGAAGCATAGTGAGATGGGCTAGATAAAATGTTTGGTGCAGGGGCCTCACCCTGAGACTGAGGTCTCTGCTGATCCCATGACAGCTCCTTTTGAGGATAATGTCCTAGAGGGATGGACTGTGGCATAGCAGAGGAGGACAAAAGAGGACCAGGTGATGAAGAGACCACTTGTGGCATACTCTGCGGGTAGGAGGTTGGCAGATGCTGATGGTGATTTGCAGGTGAAGATGCGCCTGGAGAAACAACAGTTTGTGGGTCAGTGGCA gi|109281281|gb|EC393195.1|EC393195 GGGGAAAACTGCTGGCCCTGGAACTGCAGCTGGCCATTTACCAACCCCTCCTGGCCCATGACGGTACACCCTGAGCCCAGGTACTCCTTTGCATCCACCTCCTGCTTGATGTGAGGCATCCCAGTAAAGCTGCCCTTGCGACCATCCTGCATGCTGGGGTGAGGGAGTGGGAACTTGAAGGCTGAGTAGGTATACTTTGCGCCGGTGCTTTCGAGGAGCTGCTTTAGCTCGGACACTGGGTCGCTACCGTCTTGGGATGGGTTAACAAAACGAGGCTGGGAATCAGTGTTCACCGTCATCCATGGGTTCCGAGGGGAGCTTTTCTGGCAGCTTCCATCTGTACCCGGGTTCCACTGCTGGGGTCGGAGATTGGGGGTCGATGGGTGTATGCTTGCAAATGGGGACTTGGAGGATGGGTATGTGGAAGCATAGTGAGATGGGCTAGATAAAATGTTTGGTGCAGGGGCCTCACCCTGAGACTGAGGTCTCTGCTGATCCCATGACAGCTCCTTTTGAGGATAATGTCCTGGAGGGATGGACTGTGGCATAGCAGAGGAGGACAAAAGAGGACCAGGTGATGAAGAGACCACTTGTGGCATACTCTGCGGGTAGGAGGTTGGCAGATGCTGATGGTGATTTGCAGGTGAAGATGCGCCTGGAGAA*CAACAGTTTGTGGGTCAGTGGCAGACAAC gi|109281418|gb|EC393265.1|EC393265 GGGGAAAACTGCTGGCCCTGGAACTGCAGCTGGCCATTTACCAACCCCTCCTGGCCCATGACGGTACACCCTGAGCCCAGGTACTCCTTTGCATCCACCTCCTGCTTGATGTGAGGCATCCCAGTAAAGCTGCCCTTGCGACCATCCTGCATGCTGGGGTGAGGGAGTGGGAACTTGAAGGCTGAGTAGGTATACTTTGCGCCGGTGCTTTCGAGGAGCTGCTTTAGCTCGGACACTGGGTCGCTACTGTCTTGGGATGGGTTAACAAAACGAGGCTGGGAATCAGTGTTCACCGTCATCCATGGGTTCCGAGGGGAGCTTTTCTCGCAGCTTCCACCTGTACCTGGGTTCCACTGCTGGGGTCGGAGATTCGGGGTCGATGGGTGTATACTTGCAAATGGGGACTTGGAGGATGGGTATGTGGAAGCATAGTGAGATGGGCTAGATAAAATGTTTGGTGCAGGGGCCTCACCCTGAGACTGAGGTCTCTGCTGATCCCATGACAGCTCCTTTTGAGGATAATGTCCCAGAGGGATGGACTGTGGCATAGCAGAGGAGGACAAAAGAGGACCAGGTGATGAAGAGACCACTTGTGGCATACTCTGCGGGTAGGAGGTTGGCAGATGCTGATGGTGATTTGCAGGTGAAGATGC gi|109282397|gb|EC393774.1|EC393774 GGGGAAAACTGCTGGCCCTGGAACTGCAGCTGGCCATTTACCAACCCCTCCTGGCCCATGACGGTACACCCTGAGCCCAGGTACTCCTTTGCATCCACCTCCTGCTTGATGTGAGGCATCCCAGTAAAGCTGCCCTTGCGACCATCCTGCATGCTGGGGTGAGGGAGTGGGAACTTGAAGGCTGAGTAGGTATACTTTGCGCCGGTGCTTTCGAGGAGCTGCTTTAGCTCGGACACTGGGTCGCTACTGTCTTGGGATGGGTTAACAAAACGAGGCTGGGAATCAGTGTTCACCGTCATCCATGGGTTCCGAGGGGAGCTTTTCTCGCAGCTTCCACCTGTACCTGGGTTCCACTGCTGGGGTCGGAGATTCGGGGTCGATGGGTGTATACTTGCAAATGGGGACTTGGAGGATGGGTATGTGGAAGCATAGTGAGATGGGCTAGATAAAATGTTTGGTGCAGGGGCCTCACCCTGAGGCTGAGGTCTCTGCTGATCCCATGACAGCTCCTTTTGAGGATAATGTCCCAGAGGGATGGACTGTGGCATAGCAGAGGAGGACAAAAGAGGACCAGGTGATGAAGAGACCACTTGTGGCATACTCTGCGGGTAGGAGGTTGGCAGATGCTGATGGTGATTTGCAGGTGAAGATGCGCCTLLLLLLLLLLLLLLLL gi|109282540|gb|EC393841.1|EC393841 GGGGAAAACTGCTGGCCCTGGAACTGCAGCTGGCCATTTACCAACCCCTCCTGGCCCATGACGGTACACCCTGAGCCCAGGTACTCCTTTGCATCCACCTCCTGCTTGATGTGAGGCATCCCAGTAAAGCTGCCCTTGCGACCATCCTGCATGCTGGGGTGAGGGAGTGGGAACTTGAAGGCTGAGTAGGTATACTTTGCGCCGGTGCTTTCGAGGAGCTGCTTTAGCTCGGACACTGGGTCGCTACTGTCTTGGGATGGGTTAACAAAACGAGGCTGGGAATCAGTGTTCACCGTCATCCATGGGTTCCGAGGGGAGCTTTTCTCGCAGCTTCCACCTGTACCTGGGTTCCACTGCTGGGGTCGGAGATTCGGGGTCGATGGGTGTATACTCGCAAATGGGGACTTGGAGGATGGGTATGTGGAAGCATAGTGAGATGGGCTAGATAAAATGTTTGGTGCAGGGGCCTCACCCTGAGACTGAGGTCTCTGCTGATCCCATGACGGCTCCTTTTGAGGATAATGTCCCAGAGGGATGGACTGTGGCATAGCAGAGGAGGACAAAAGAGGACCAGGTGATGAAGAGACCACTTGTGGCATACTCTGCGGGTAGGAGGTTGG Putative SNPs: 248C>T, 326G>C, 337T>C, 345C>T, 372G>C, 390G>A, 528T>C 46. 100 200 300 400 500 600 700 800 900 .........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+.........+.........+.........+.........|.........+.........+.........+.........+.........+.........+. Cyprinus_Cluster8184.seq.Contig1 GGAGATTAGATAGGCTATACAGTCAGAATCCAATTGTTTATAAGCACCGTCCGGCACGAATGGCATTTTTGCATGAATGTAAATACTGCTTATATATCAAAAAGGTGCGAAGCTAACGCTCTTCAGTGAATAGAGTGAATGGTCCCGCCTCCTGCTCGTTCTACTACGTCTATCAGCGTCGAGCACATGACTGCAGTAACTGTGTTCTGTAACTCCAGTCACGAGGATGGAGTACTATTACACTGACCAGACAGCGAGCTCAACCCAATAACCCGAAACGAGCACATTTACAGCGCTTACAATATCCCTGCTGACACAAGGACACAGGACAACACCACCGAGCGTTTCCTAAAAGCGTTCAAATGTTACGAAAACGAGTCGTCACCTTTCAGTGACACCTGACACACCGTACACGGAGCGCGCGGTTTGTAAACATGCACGAATTGGCGATTTCATTTAT*GATGCGAAAATGATTCTTCACCGGCACGTGCTATATTTTGAATTAAAAAGAATACATCAATGCACCGCATCCTTAACCCCATCCTTGTCCTGAAATCTATATTCCAGTGAAAGTATCCGTGTTTCAAAGCACGCTTTTGAAGCGTTATATTGTAATTCACTAATCTACGTGTAATGTATCTATAAATAAACACTTTGCGGTTGCCTGCTTGACATGACAAGTGCAAACGCACAGCGTTTATTTATTAATATCAACAGCACACACTGGCACATGATGCAGAGATCGTCTGACTACTTCTAATTAGCATCAAGCTCGTTTTGTAACAGTTACGCAAACGCTTACGAAAACAATGCATTTCGTCAGTTGCGTAAAGAGTTCCGATCTCTACACAGATATGCACCTATATATATATATAACACCTATATGTATACATTTTGTAAGCATATGTATAGGCTACATTTTGTAAAGGCATACAGTGCTGCGTATCATTTTTTCAACTG ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- gi|50742789|gb|CF660663.2|CF660663 GGAGATTAGATAGGCTATACAGTCAGAATCCAATTGTTTATAAGCACCGTCCGGCACGAATGGCATTTTTGCATGAATGTAAATACTGCTTATATATCAAAAAGGTGCGAAGCTAACGCTCTTCAGTGAATAGAGTGAATGGTCCCGCCTCCTGCTCGTTCTACTACGTCTATCAGCGTCGAGCACATGACTGCAGTAACTGTGTTCTGTAACTCCAGTCACGAGGATGGAGTACTATTACACTGACCAGACAGCGAGCTCAACCCAATAACCCGAAACGAGCACATTTACAGCGCTTACAATATCCCTGCTGACACAAGGACACAGGACAACACCACCGAGCGTTTCCTAAAAGCGTTCAAATGTTACGAAAACGAGTCGTCACCTTTCAGTGACACCTGACACACCGTACACGGAGCGCGCGGTTTGTAAACATGCACGAATTGGCGATTTCATTTAT*GATGCGAAAATGATTCTTCACCGGCACGTGCTATATTTTGAATTAAAAAGAATACATCAATGCACCGCATCCTTAACCCCATCCTTGTCCTGAAATCTATATTCCAGTGAAAGTATCCGTGTTTCAAAGCACGCTTTTGAAGCGTTATATTGTAATTCACTAATCTACGTGTAATGTATCTATAAATAAACACTTTGCGGTTGCCTGCTTGACATGACAAGTGCAAACGCACAGCGTTTATTTATTAATATCAACAGCACACACTGGCACATGATGCAGAGATCGTCTGACTACTTCTAATTAGCATCAAGCTCGTTTTGTAACAGTTACGCAAACGCTTACGAAAACAATGCATTTCGTCAGTTGCGTAAAGAGTTCCGATCTCTACACAGATATGCACCTATATATATATATAACACCTATATGTATACATTTTGTAAGCATATGTATAGGCTACATTTTLLL gi|50742790|gb|CF660664.2|CF660664 ATTAGATAGGCTATACAGTCAGAATCCAATTGTTTATAAGCACCGTCCGGCACGAATGGCATTTTTGCATGAATGTAAATACTGCTTATATATCAAAAAGGTGCGAAGCTAACGCTCTTCAGTGAATAGAGTGAATGGTCCCGCCTCCTGCTCGTTCTACTACGTCTATCAGCGTCGAGCACATGACTGCAGTAACTGTGTTCTGTAACTCCAGTCACGAGGATGGAGTACTATTACACTGACCAGACAGCGAGCTCAACCCAATAACCCGAAACGAGCACATTTACAGCGCTTACAATATCCCTGCTGACACAAGGACACAGGACAACACCACCGAGCGTTTCCTAAAAGCGTTCAAATGTTACGAAAACGAGTCGTCACCTTTCAGTGACACCTGACACACCGTACACGGAGCGCGCGGTTTGTAAACATGCACGAATTGGCGATTTCATTTAT*GATGCGAAAATGATTCTTCACCGGCACGTGCTATATTTTGAATTAAAAAGAATACATCAATGCACCGCATCCTTAACCCCATCCTTGTCCTGAAATCTATATTCCAGTGAAAGTATCCGTGTTTCAAAGCACGCTTTTGAAGCGTTATATTGTAATTCACTAATCTACGTGTAATGTATCTATAAATAAACACTTTGCGGTTGCCTGCTTGACATGACAAGTGCAAACGCACAGCGTTTATTTATTAATATCAACAGCACACACTGGCACATGATGCAGAGATCGTCTGACTACTTCTAATTAGCATCAAGCTCGTTTTGTAACAGTTACGCAAACGCTTACGAAAACAATGCATTTCGTCAGTTGCGTAAAGAGTTCCGATCTCTACACAGATATGCACCTATATATATATATAACACCTATATGTATA gi|50743784|gb|CF661532.2|CF661532 AGGCTATACAGTCTGAATCCAATTGTTTATAAGCACCGTCCGGCACGAATGGCATTTTTGCATGAATGTAAATACTGCTTATATATCAAAAAGGTGCGAAGCTAACGCTCTTCAGTGAATAGAGTGAATGGTCCCGCCTCCTGCTCGTTCTACTACGTCTATCAGCGTCGAGCACATGACTGCAGTAACTGTGTTCTGTAACTCCAGTCACGAGGATGGAGTACTATTACACTGACCAGACAGCGAGCTCAACCCAATAACCCGAAACGAGCACATTTACAACGCTTACAATATCCCTGCTGACACAAGGACACAGGACAACACCACCGAGCGTTTCCTAAAAGCGTTCAAATGTTACGAAAACGAGTCGTCACCTTTCAGTGACACCTGACACACCGTACACGGAGCGCGCGGTTTGTAAACATGCCCGAATTGGCGATTTCATTTAT*GATGCGAAAATGATTCTTCACCGGCACGTGCTATATTTTGAATTAAAAAGAATACATCAATGCACCGCATCCTTAACCCCATCCTTGCCCTGAAATCTATATTCCAGTGAAAGTATCCGTGTTTCAAAGCACGCTTTTGAAGCGTTATATTGTAATTCACTAATCTACGTGTAATGTATCTATAAATAAACACTTTGCGGTTGCCTGCTTGACATGACAAGTGCAAACGCACAGCGTTTATTTATTAATATCAACAGCACACACTGGCACATGATGCAGAGATCGTCTGACTACTTCTAATTAGCATCAAGCTCGTTTTGTAACAGTTACGCAAACGCTTACGAAAACAATGCATTTCGTCAGTTGCGTAAAGAGTTCCGATCTCTACACAGATATGCACCTATATATATATATAACACCTATATGTATACATTTTGTAAGCATATGTATAGGCTACATTTTGT gi|50742746|gb|CF660641.2|CF660641 GGCTATACAGTCTGAATCCAATTGTTTATAAGCACCGTCCGGCACGAATGGCATTTTTGCATGAATGTAAATACTGCTTATATATCAAAAAGGTGCGAAGCTAACGCTCTTCAGTGAATAGAGTGAATGGTCCCGCCTCCTGCTCGTTCTACTACGTCTATCAGCGTCGAGCACATGACTGCAGTAACTGTGTTCTGTAACTCCAGTCACGAGGATGGAGTACTATTACACTGACCAGACAGCGAGCTCAACCCAATAACCCGAAACGAGCACATTTACAGCGCTTACAATATCCCTGCTGACACAAGGACACAGGACAACACCACCGAGCGTTTCCTAAAAGCGTTCAAATGTTACGAAAACGAGTCGTCACCTTTCAGTGACACCTGACACACCGTACACGGAGCGCGCGGTTTGTAAACATGCACGAATTGGCGATTTCATTTAT*GATGCGAAAATGATTCTTCACCGGCACGTGCTATATTTTGAATTAAAAAGAATACATCAATGCACCGCATCCTTAACCCCATCCTTGTCCTGAAATCTATATTCCAGTGAAAGTATCCGTGTTTCAAAGCACGCTTTTGAAGCGTTATATTGTAATTCACTAATCTACGTGTAATGTATCTATAAATAAACACTTTGCGGTTGCCTGCCTGACATGACAAGTGCAAACGCACAGCGTTTATTTATTAATATCAACAGCACACACTGGCACATGATGCAGAGATCGTCTGACTACTTCTAATTAGCATCAAGCTCGTTTTGTAACAGTTACGCAAACGCTTACGAAAACAATGCATTTCGTCAGTTGCGTAAAGAGTTCCGATCTCTACACAGATATGCACCTATATATATATATAACACCTATATGTATACATTTTGTAAGCATATGTATAGGCTACATTTTGTAAAGGCATACAGTGCTGCGTATCATTTTTTCAACTG gi|50742723|gb|CF660634.2|CF660634 ACCGTCCGGCACGAATGGCATTTTTGCATGAATGTAAATACTGCTTATATATCAAAAAGGTGCGAAGCTAACGCTCTTCAGTGAATAGAGTGAATGGTCCCGCCTCCTGCTAGTTCTACTACGTCTATCAGCGTCGAGCACATGACTGCAGGAACTGTGTTCTGTAACTCCAGTCACGAGGATGGAGTACTATTACACTGACCAGACAGCGAGCTCAACCCAATAACCCGAAGCGAGCACATTTACAGCGCTTACAATATCCCTGCTGACACAAGGACACAGGACAACACCACCGAGCGTTTCCTAAAAGCGTTCAAATGTTACGAAAACGAGTCGTCACCTTTCAGTGACACCTGACACACCGTACGCGGAGCGCGCGGTTTGTAAACATGCACGAATTGGCGATTTCATTTAT*GATGCGAAAATGATTCTTCACCGGCACGTGCTATATTTTGAATTAAAAAGAATACATCAATGCACCGCATCCTTAACCCCATCCTTGTCCTGAAATCTATATTCCAGTGAAAGTATCCGTGTTTCAAAGCACGCTTTTGAAGCGTTATATTGTAATTCACTAATCTACGTGTAATGTATCTATAAATAAACACTTTGCGGTTGCCTGCTTGACATGACAAGTGGCAACGCACAGCGTTTATTTATTAATATCAACAGCACACGCTGGCACAT gi|50742717|gb|CF660632.2|CF660632 AGTAACTGTGTTCTGTAAATCCCATCACGAAGATGGAGTACTATTACACTGACCAGACAGCGAGCTCGACCCAATAACCCGAAACGAGCACTTTTACGACGCTTACTATATCCCTGCTGACACAATGACACAGGACAACACCACCGAGCGTTTCCTAAAAGCGTTCAAATGTAACGAAAACGAGTCGTCACCTTTCAGTGACACTTGAGACGCCGTACACGGAGCGCGCGGTTTGTAAACATGCACGAATTGGCGATTTCATTTATAGATGCGAAAATGATTCTTCATCGGCACGTGCTATATTTTGAAATAAAAAGAATACATCAATGCACCGCAACCTTAACTCCATCCTTGTCCTGAAATCTATATTCCAGTGAAAGTATCCAAGTTTCAAAGCACGCTT gi|50743801|gb|CF661546.2|CF661546 LLGTTTGTAAACATGCCCAAATTGGCGATTTCACTTAT*GATGCTAAAATGATTCTTCACCGGCACGTACTATATTTTCAATTAAAAAGAATACATCAGTGCACCGCATCCTTAACCCCATCCTAGCCCTGAAATCTATATTCCAGTGAAAGTATCCGTGTTTCAAAACACCCTTTTGAAGCGCTATATTGTAATTCACTAATCTACGTGTAATGTATCTATAAATAAACACTTTGCGGTTGCCTGCTTGACATGACAAGTGCAAAC Putative SNPs: 25A>T, 293G>A, 439A>C