<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE article PUBLIC "-//NLM//DTD Journal Publishing DTD v2.3 20070202//EN" "journalpublishing.dtd">
<article xmlns:xlink="http://www.w3.org/1999/xlink" xml:lang="en" article-type="research-article">
<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">ijms</journal-id>
<journal-title>International Journal of Molecular Sciences</journal-title>
<abbrev-journal-title>Int. J. Mol. Sci.</abbrev-journal-title>
<issn pub-type="epub">1422-0067</issn>
<publisher>
<publisher-name>Molecular Diversity Preservation International (MDPI)</publisher-name></publisher></journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3390/ijms11124814</article-id>
<article-id pub-id-type="publisher-id">ijms-11-04814</article-id>
<article-categories>
<subj-group>
<subject>Article</subject></subj-group></article-categories>
<title-group>
<article-title>The <italic>lin-4</italic> Gene Controls Fat Accumulation and Longevity in <italic>Caenorhabditis elegans</italic></article-title></title-group>
<contrib-group>
<contrib contrib-type="author">
<name><surname>Zhu</surname><given-names>Chun</given-names></name><xref ref-type="aff" rid="af1-ijms-11-04814">1</xref><xref ref-type="fn" rid="fn1-ijms-11-04814">†</xref></contrib>
<contrib contrib-type="author">
<name><surname>Ji</surname><given-names>Chen-Bo</given-names></name><xref ref-type="aff" rid="af2-ijms-11-04814">2</xref><xref ref-type="fn" rid="fn1-ijms-11-04814">†</xref></contrib>
<contrib contrib-type="author">
<name><surname>Zhang</surname><given-names>Chun-Mei</given-names></name><xref ref-type="aff" rid="af1-ijms-11-04814">1</xref></contrib>
<contrib contrib-type="author">
<name><surname>Gao</surname><given-names>Chun-Lin</given-names></name><xref ref-type="aff" rid="af2-ijms-11-04814">2</xref></contrib>
<contrib contrib-type="author">
<name><surname>Zhu</surname><given-names>Jin-Gai</given-names></name><xref ref-type="aff" rid="af2-ijms-11-04814">2</xref></contrib>
<contrib contrib-type="author">
<name><surname>Qin</surname><given-names>Da-Ni</given-names></name><xref ref-type="aff" rid="af2-ijms-11-04814">2</xref></contrib>
<contrib contrib-type="author">
<name><surname>Kou</surname><given-names>Chun-Zhao</given-names></name><xref ref-type="aff" rid="af2-ijms-11-04814">2</xref></contrib>
<contrib contrib-type="author">
<name><surname>Zhu</surname><given-names>Guan-Zhong</given-names></name><xref ref-type="aff" rid="af2-ijms-11-04814">2</xref></contrib>
<contrib contrib-type="author">
<name><surname>Shi</surname><given-names>Chun-Mei</given-names></name><xref ref-type="aff" rid="af2-ijms-11-04814">2</xref></contrib>
<contrib contrib-type="author">
<name><surname>Guo</surname><given-names>Xi-Rong</given-names></name><xref ref-type="aff" rid="af1-ijms-11-04814">1</xref><xref ref-type="corresp" rid="c1-ijms-11-04814">*</xref></contrib></contrib-group>
<aff id="af1-ijms-11-04814">
<label>1</label> Department of Pediatrics, Nanjing Maternal and Child Health Hospital of Nanjing Medical University, No.123 Tianfei Road, 210004 Nanjing, China; E-Mails: <email>zhifangxibao@163.com</email>(C.Z.); <email>zhangcm79@163.com</email> (C.-M.Z.)</aff>
<aff id="af2-ijms-11-04814">
<label>2</label> Institute of Pediatrics, Nanjing Medical University, No.140 Hanzhong Road, 210029 Nanjing, China; E-Mails: <email>Jiliu1036@163.com</email> (C.-B.J.); <email>shuangmu34@sina.com</email> (C.-L.G.); <email>zhujingai1983@163.com</email> (J.-G.Z.); <email>qindani@yahoo.com.cn</email> (D.-N.Q.); <email>kou19850112@163.com</email> (C.-Z.K); <email>aerozgz@yahoo.com.cn</email> (G.-Z.Z.); <email>shichunmei_87@163.com</email> (C.-M.S.)</aff>
<author-notes><fn id="fn1-ijms-11-04814">
<label>†</label>
<p>These authors contributed equally to this work.</p></fn>
<corresp id="c1-ijms-11-04814">
<label>*</label>Author to whom correspondence should be addressed; E-Mail: <email>xrguo@njmu.edu.cn</email>; Tel.: +86-25-868-629-96; Fax: +86-25-868-629-96.</corresp></author-notes>
<pub-date pub-type="collection">
<year>2010</year></pub-date>
<pub-date pub-type="epub">
<day>25</day>
<month>11</month>
<year>2010</year></pub-date>
<volume>11</volume>
<issue>12</issue>
<fpage>4814</fpage>
<lpage>4825</lpage>
<history>
<date date-type="received">
<day>10</day>
<month>10</month>
<year>2010</year></date>
<date date-type="rev-recd">
<day>5</day>
<month>11</month>
<year>2010</year></date>
<date date-type="accepted">
<day>18</day>
<month>11</month>
<year>2010</year></date></history>
<permissions>
<copyright-statement>© 2010 by the authors; licensee MDPI, Basel, Switzerland.</copyright-statement>
<copyright-year>2010</copyright-year>
<license license-type="open-access" xlink:href="http://creativecommons.org/licenses/by/3.0">
<p>This article is an open-access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/).</p></license></permissions>
<abstract>
<p>Previous studies have determined that <italic>lin-4</italic>, which was the first miRNA to be discovered, controls the timing of cell fate determination and life span in <italic>Caenorhabditis elegans</italic>. However, the mechanism of <italic>lin-4</italic> involvement in these processes remains poorly understood. Fat storage is an essential aspect of the life cycle of organisms, and the function of <italic>lin-4</italic> in fat accumulation is not clear. In this study, we showed that the fat content is reduced remarkably in <italic>C. elegans lin-4</italic> mutants. Quantitative RT-PCR analysis revealed a considerable decrease in the levels of SBP-1 and OGA-1 mRNA in <italic>lin-4</italic> mutants. We also showed that <italic>lin-4</italic> mutants have a significantly shorter life span than wild-type worms. DCF assay experiments showed that the reactive oxygen species (ROS) levels increased and mitochondrial DNA (mtDNA) copy number decreased in loss-of-function <italic>lin-4</italic> mutants. These mutants also showed attenuation of locomotion. Taken together, our findings suggest that <italic>lin-4</italic> may play an important role in regulating fat accumulation and locomotion and that <italic>lin-4</italic> may control the life span of <italic>C. elegans</italic> by mediating ROS production.</p></abstract>
<kwd-group>
<kwd>lin-4</kwd>
<kwd>Caenorhabditis elegans</kwd>
<kwd>fat accumulation</kwd>
<kwd>life span</kwd>
<kwd>locomotion</kwd></kwd-group></article-meta></front>
<body>
<sec sec-type="intro">
<label>1.</label>
<title>Introduction</title>
<p>MicroRNAs (miRNAs) are 18–25-nucleotide-long single-stranded RNAs that are involved in the post-transcriptional regulation of gene expression by base pairing with complementary sequences in the 3′ untranslated regions (3′ UTRs) of protein-coding transcripts. This interaction leads to the inhibition of translation [<xref ref-type="bibr" rid="b1-ijms-11-04814">1</xref>,<xref ref-type="bibr" rid="b2-ijms-11-04814">2</xref>]. Although the biological functions of most miRNAs are unknown, miRNAs are predicted to regulate up to 30% of the genes within the human genome [<xref ref-type="bibr" rid="b3-ijms-11-04814">3</xref>]. Emerging evidence also suggests that miRNAs play important regulatory roles in a variety of biological processes, including adipocyte differentiation, metabolic integration, insulin resistance, and appetite regulation [<xref ref-type="bibr" rid="b4-ijms-11-04814">4</xref>]. Although the <italic>Caenorhabditis elegans</italic> genome encodes over 100 miRNAs, the functions of only five have been elucidated, and less than 15 valid <italic>C. elegans</italic> target genes are known [<xref ref-type="bibr" rid="b5-ijms-11-04814">5</xref>]. As the first miRNA discovered, <italic>lin-4</italic> acts as a developmental switch that controls the timing of cell fate determination during larval transitions in <italic>C. elegans</italic> and regulates the life span of the adults [<xref ref-type="bibr" rid="b6-ijms-11-04814">6</xref>,<xref ref-type="bibr" rid="b7-ijms-11-04814">7</xref>]. However, our current knowledge of the connection between <italic>lin-4</italic>, life span, and locomotion in <italic>C. elegans</italic> is very limited.</p>
<p>The increasing prevalence of obesity has significant implications for the health of humans because obesity is associated with serious co-morbidities, including type 2 diabetes mellitus, hyperlipidemia, and hypertension [<xref ref-type="bibr" rid="b8-ijms-11-04814">8</xref>]. Obesity results from a prolonged imbalance in energy homeostasis between caloric intake and expenditure. Animal models have provided an understanding of the basic parameters that regulate the components of energy balance [<xref ref-type="bibr" rid="b9-ijms-11-04814">9</xref>]. The use of invertebrates such as <italic>C. elegans</italic>, which is an excellent model for many biological processes, may be a more efficient method of screening research materials and a powerful system for analyzing the mechanisms of fat storage. Moreover, many components regulating human metabolism, including the biochemical pathways of fats, carbohydrates, and protein synthesis, are conserved in the nematode <italic>C. elegans</italic> [<xref ref-type="bibr" rid="b10-ijms-11-04814">10</xref>,<xref ref-type="bibr" rid="b11-ijms-11-04814">11</xref>]. However, the relationship between <italic>lin-4</italic> and fat accumulation is unknown.</p>
<p>In this study, we compared fat accumulation, reactive oxygen species (ROS) levels, mitochondrial DNA (mtDNA) copy number, life span, and locomotion in <italic>lin-4</italic> mutants with those in wild-type <italic>C. elegans</italic>. We also tested whether feeding glucose and fatty acids affects fat storage in <italic>C. elegans</italic>. In addition, we used the real-time quantitative reverse transcriptase-polymerase chain reaction (RT-PCR) to determine the mRNA expression of SBP-1 and OGA-1, which are key genes in regulating and controlling the amount and composition of fat [<xref ref-type="bibr" rid="b12-ijms-11-04814">12</xref>,<xref ref-type="bibr" rid="b13-ijms-11-04814">13</xref>].</p></sec>
<sec sec-type="results|discussion">
<label>2.</label>
<title>Results and Discussion</title>
<sec>
<label>2.1.</label>
<title>The Fat Content Is Remarkably Reduced in <italic>lin-4</italic> Mutants</title>
<p>As shown in <xref ref-type="fig" rid="f1-ijms-11-04814">Figure 1</xref>, when worms were fed a normal diet of <italic>E. coli</italic> OP50 bacteria, animals with a loss-of-function mutation in <italic>lin-4</italic> showed fat content that was significantly lower than that in wild-type animals. After adding glucose and fatty acid to culture dishes containing <italic>C. elegans</italic>, we found an increase in fluorescence in Nile red staining, thereby indicating an increase in intracellular fat. However, fat levels were also reduced considerably in <italic>lin-4</italic> mutants compared to wild-type animals. To determine whether the key genes in the metabolic pathways for fatty acid synthesis in nematodes are involved in regulating fat accumulation, we measured mRNA levels of SBP-1 and OGA-1 by using quantitative RT-PCR analysis. We found that both SBP-1 and OGA-1 mRNA levels were reduced in <italic>lin-4</italic> mutants, especially SBP-1(<xref ref-type="fig" rid="f2-ijms-11-04814">Figure 2</xref>).</p></sec>
<sec>
<label>2.2.</label>
<title>ROS Accumulation and Decreased Copy Number of mtDNA in <italic>lin-4</italic> Mutants</title>
<p>DCF assay experiments revealed that worms with a loss-of-function mutation in <italic>lin-4</italic> showed ROS accumulation (<xref ref-type="fig" rid="f3-ijms-11-04814">Figure 3</xref>). We examined the mtDNA copy number in <italic>lin-4</italic> mutants and wild-type animals by performing real-time PCR. The mtDNA copy number in <italic>lin-4</italic> mutants was significantly lower than that in the wild-type control (<xref ref-type="fig" rid="f4-ijms-11-04814">Figure 4</xref>).</p></sec>
<sec>
<label>2.3.</label>
<title>Effect of <italic>lin-4</italic> on the Life Span and Locomotion of <italic>C. elegans</italic></title>
<p>As seen in <xref ref-type="fig" rid="f5-ijms-11-04814">Figure 5A</xref>, the mean and maximum life span of wild-type worms grown on NGM plates containing paraquat were, respectively, 7.64 d (<italic>p</italic> &lt; 0.01) and 10 d (<italic>p</italic> &lt; 0.01) lower than the corresponding values for wild-type worms grown on NGM plates. The mean and maximum life span of <italic>lin-4</italic> mutants grown on NGM plates containing paraquat were, respectively, 4.77 d (<italic>p</italic> &lt; 0.01) and 8 d (<italic>p</italic> &lt; 0.01) lower than the corresponding values for <italic>lin-4</italic> mutants grown on NGM plates. The mean and maximum life span of worms with a loss-of-function mutation in <italic>lin-4</italic> were, respectively, 7.29 d (<italic>p</italic> &lt; 0.01) and 9 d (<italic>p</italic> &lt; 0.01) lower than the corresponding values for the wild-type worms. Further, the mean and maximum life span of <italic>lin-4</italic> mutants grown on NGM plates containing paraquat were, respectively, 4.42 d (<italic>p</italic> &lt; 0.01) and 7 d (<italic>p</italic> &lt; 0.01) lower than the corresponding values for the wild-type worms grown on NGM plates containing paraquat. The mean and maximum life span of wild-type worms grown on NGM plates containing paraquat were, respectively, 0.35 d (<italic>p</italic> &gt; 0.05) and 1 d (<italic>p</italic> &gt; 0.05) lower than the corresponding values for <italic>lin-4</italic> mutants grown on NGM plates. The mean and maximum life span of <italic>lin-4</italic> mutants grown on NGM plates containing paraquat were, respectively, 12.06 d (<italic>p</italic> &lt; 0.01) and 17 d (<italic>p</italic> &lt; 0.01) lower than the corresponding values for wild-type worms grown on NGM plates. Additionally, assessment of the body-bend behavior of <italic>C. elegans</italic> showed that a loss-of-function mutation in <italic>lin-4</italic> caused severe movement defects (<xref ref-type="fig" rid="f5-ijms-11-04814">Figure 5B</xref>).</p></sec>
<sec sec-type="discussion">
<label>2.4.</label>
<title>Discussion</title>
<p>In the present study, we showed that <italic>lin-4</italic> mutants had a remarkably reduced fat content and that this phenomenon also occurred when glucose or fatty acid was used as an energy source. SBP-1 is a homolog of the mammalian transcription factor Sterol response element binding protein (SREBP). SREBP is a key transcriptional regulator in the fat and sterol synthesis pathways [<xref ref-type="bibr" rid="b14-ijms-11-04814">14</xref>]. Previous studies have shown that loss-of-function mutations in <italic>C. elegans</italic> SREBP are possibly correlated with decreased fat storage [<xref ref-type="bibr" rid="b10-ijms-11-04814">10</xref>,<xref ref-type="bibr" rid="b15-ijms-11-04814">15</xref>]. <italic>O</italic>-linked <italic>N</italic>-acetylglucosamine (<italic>O</italic>-GlcNAc) is thought of as a dynamic nuclear and cytosolic modulator of transcriptional and signal transduction events [<xref ref-type="bibr" rid="b16-ijms-11-04814">16</xref>]. OGA is a key enzyme regulating <italic>O</italic>-GlcNAc cycling and is highly conserved in eukaryotic evolution from <italic>Drosophila melanogaster</italic> and <italic>C. elegans</italic> to rodents and man [<xref ref-type="bibr" rid="b13-ijms-11-04814">13</xref>]. A recent study suggested that active cycling of <italic>O</italic>-GlcNAc by OGA-1 was required to maintain normal fat reserves in worms. In contrast, reduced fat accumulation was seen in mutant strains [<xref ref-type="bibr" rid="b13-ijms-11-04814">13</xref>]. We speculate that the remarkable reduction in fat accumulation in <italic>lin-4</italic> mutants is due to the reduction in SBP-1 and OGA-1 mRNA levels.</p>
<p>Many studies have addressed the effect of <italic>lin-4</italic> on the life span of <italic>C. elegans</italic>, while none has reported the relationship between ROS and <italic>lin-4</italic>. We assayed <italic>lin-4</italic> mutants and wild-type worms for intracellular ROS and mtDNA copy number and found that mutations in <italic>lin-4</italic> resulted in ROS accumulation and a decreased mtDNA copy number. Worms with a loss-of-function mutation in <italic>lin-4</italic> had a life span that was significantly shorter than that of wild-type worms. Paraquat is a bipyridyl herbicide that consumes oxygen and generates superoxides [<xref ref-type="bibr" rid="b17-ijms-11-04814">17</xref>]. We added paraquat to culture plates and observed a considerable shortening in life span, especially in <italic>lin-4</italic> mutants. This result shows that <italic>lin-4</italic> is required to prevent premature death. Previous studies have suggested that ROS possibly influences and controls the life span of animals. For example, <italic>daf-2</italic> and <italic>isp-1</italic> mutants live longer because of their low levels of ROS [<xref ref-type="bibr" rid="b18-ijms-11-04814">18</xref>]. Similarly, <italic>clk-1</italic> mutants have low levels of accumulated byproducts from oxidative damage and extended life spans because of decreased ROS levels [<xref ref-type="bibr" rid="b19-ijms-11-04814">19</xref>]. Mitochondria are major sources of ROS, and the mitochondria themselves can be damaged by ROS [<xref ref-type="bibr" rid="b30-ijms-11-04814">30</xref>]. However, there is only indirect evidence linking genes encoded by mtDNA function with aging. This evidence is in the form of a series of mutations in nuclear genes that is sufficient to prove mtDNA involvement in the regulation of aging [<xref ref-type="bibr" rid="b21-ijms-11-04814">21</xref>]. Therefore, we aimed to determine whether ROS and mtDNA influence the life span of <italic>lin-4</italic> mutants.</p>
<p>Locomotion of <italic>C. elegans</italic> is controlled by a subset of its nervous system, and manipulations at the genetic or neuronal level allow an insight into the inner workings of this control [<xref ref-type="bibr" rid="b22-ijms-11-04814">22</xref>]. Previous studies revealed that physiological levels of oxidative stress are associated with a balance between beneficial and harmful effects, and that normal levels of oxidative stress in <italic>C. elegans</italic> may be optimized for locomotor activity [<xref ref-type="bibr" rid="b23-ijms-11-04814">23</xref>,<xref ref-type="bibr" rid="b24-ijms-11-04814">24</xref>]. In the mature central nervous system, oxidative stress, calcium influx, and glutamate excitotoxicity can induce apoptosis. High ROS levels are capable of damaging cellular components, proteins, and nucleic acids and can even cause necrosis [<xref ref-type="bibr" rid="b25-ijms-11-04814">25</xref>]. These facts imply that a loss-of-function mutation in <italic>lin-4</italic> caused movement defects because of severe ROS accumulation.</p></sec></sec>
<sec sec-type="methods">
<label>3.</label>
<title>Experimental Methods</title>
<sec>
<label>3.1.</label>
<title>Worms and Culture</title>
<p>Wild-type <italic>C. elegans</italic> Bristol (N2) and <italic>lin-4</italic> (e912) variant worms used in this study were obtained from the Caenorhabditis Genetics Center (Minnesota, USA). The <italic>lin-4</italic> (e912) variant is a <italic>lin</italic>-4 null mutant. Worms were grown on NGM (Nematode Growth Medium) agar plated with <italic>E. coli</italic> OP50 at 20 °C.</p></sec>
<sec>
<label>3.2.</label>
<title>Nile Red Staining</title>
<p>Nematodes were bred on media with 50 ng/mL Nile red (MP Biomedicals, CA, USA) and <italic>E. coli</italic>. After 72 h of culture, worms were collected, treated with 0.2% paraformaldehyde (PFA) solution, and observed under a fluorescence microscope (DMRXA; Leica) with N3 filter [<xref ref-type="bibr" rid="b27-ijms-11-04814">27</xref>,<xref ref-type="bibr" rid="b28-ijms-11-04814">28</xref>]. Images of Nile red staining were acquired using a Nikon camera under identical settings and exposure times to allow direct comparisons. The relative fluorescence of the whole nematode body was determined densitometrically using Image-Pro<sup>®</sup> Plus version 6.0, a commercially available software package (Media Cybernetics, Bethesda, MD, USA).</p></sec>
<sec>
<label>3.3.</label>
<title>Effect of Fatty Acid</title>
<p>Worms were cultured on an NGM plate containing 1 mM fatty acid (stearic acid, oleic acid, or linoleic acid; WAKO, JAPAN) and 0.1% tergitol type NP-40 (Sigma, St. Louis, MO, USA) [<xref ref-type="bibr" rid="b12-ijms-11-04814">12</xref>]. When the worms reached the young adult stage, they were subjected to Nile red analysis.</p></sec>
<sec>
<label>3.4.</label>
<title>Effect of Glucose</title>
<p>Worms were cultured on an NGM plate with 5 mM glucose, and were continually fed increasing doses of glucose until they reached the young adult stage [<xref ref-type="bibr" rid="b12-ijms-11-04814">12</xref>,<xref ref-type="bibr" rid="b29-ijms-11-04814">29</xref>]. Young adult <italic>C. elegans</italic> were subjected to Nile red analysis.</p></sec>
<sec>
<label>3.5.</label>
<title>Effect of Paraquat</title>
<p>Worms were cultured on an NGM plate containing 2 mM paraquat (Sigma) [<xref ref-type="bibr" rid="b30-ijms-11-04814">30</xref>] and continued to grow into young adulthood with the dose. Young adult <italic>C. elegans</italic> were subjected to life span analysis.</p></sec>
<sec>
<label>3.6.</label>
<title>Measurement of Intracellular ROS in <italic>C. elegans</italic></title>
<p>Measurement of intracellular ROS in <italic>C. elegans</italic> was performed as previously described [<xref ref-type="bibr" rid="b31-ijms-11-04814">31</xref>]. The amount of ROS was quantified using H2-DCF-DA (Sigma) as the molecular probe. H2-DCF-DA enters the cell, converts to H2-DCF, and is then rapidly oxidized by intracellular ROS to yield the fluorescent dye DCF. <italic>C. elegans</italic> worms were transferred to 2 mL of M9 buffer (22 mmol/L KH<sub>2</sub>PO<sub>4</sub>, 22 mmol/L Na<sub>2</sub>HPO<sub>4</sub>, 85 mmol/L NaCl, and 1 mmol/L MgSO<sub>4</sub>) that contained 10 μM CM-H2DCFDA and incubated for 30 min at 20 °C. To determine the fluorescence of DCF, fixed nematode samples were analyzed using a fluorescence microscope (excitation at 488 nm and emission at 510 nm). The relative fluorescence of the whole body was determined densitometrically using Image-Pro<sup>®</sup> Plus version 6.0, a commercially available software package (Media Cybernetics).</p></sec>
<sec>
<label>3.7.</label>
<title>Real-Time PCR of mtDNA</title>
<p>The mtDNA copy number was determined by quantitative PCR assay as described previously [<xref ref-type="bibr" rid="b32-ijms-11-04814">32</xref>]. The primer sets used to amplify mtDNA and chrDNA were described previously [<xref ref-type="bibr" rid="b33-ijms-11-04814">33</xref>]. Sequences and TaqMan probes are shown in <xref ref-type="table" rid="t1-ijms-11-04814">Table 1</xref>. DNA was prepared using a DNA extraction kit (Promega, Madison, WI, USA), and the samples were analyzed on a 7300 Real-Time PCR System (Applied Biosystems, Foster City, CA USA). All values were calculated using the absolute quantification method. The mtDNA copy number was normalized to the number of nuclear DNA copies.</p></sec>
<sec>
<label>3.8.</label>
<title>Life Span and Locomotion Assay</title>
<p>Life span assays were performed as described previously [<xref ref-type="bibr" rid="b34-ijms-11-04814">34</xref>]. All life span analyses were conducted at 20 °C, starting from the L4 stage to young adult-stage worms. Death was defined as failure to move after being prodded with a platinum wire. For analysis of locomotion, worms were transferred to an agar plate without a bacterial lawn. Locomotion rate was quantified by counting the number of body bends produced by the worms in 1 min. Body bends were counted by observing flexing in the middle of the worm body.</p></sec>
<sec>
<label>3.9.</label>
<title>Quantitative RT-PCR</title>
<p>RNA extraction, purification, and reverse transcription were performed for each sample as described [<xref ref-type="bibr" rid="b35-ijms-11-04814">35</xref>]. Quantitative RT-PCR using the universal TaqMan probe was performed, and the results were analyzed using a 7300 Real-Time PCR System (Applied Biosystems) under the following conditions: Samples were incubated at 95 °C for 10 min for initial denaturation, followed by 40 cycles of amplification that were performed at 95 °C for 15 s and at 60 °C for 1 min. All data were calculated using standard relative quantification ΔΔCT methods [<xref ref-type="bibr" rid="b36-ijms-11-04814">36</xref>], and actin was used as a control for normalization. All primers and probes for quantitative RT-PCR are listed in <xref ref-type="table" rid="t2-ijms-11-04814">Table 2</xref>.</p></sec>
<sec sec-type="methods">
<label>3.10.</label>
<title>Statistical Analysis</title>
<p>All data are shown as mean ± SEM. Statistical analysis was performed using one-way ANOVA with the SPSS 12.0 statistical software package (SPSS Inc., USA). The level of significance was defined as <italic>p</italic> &lt; 0.05.</p></sec></sec>
<sec>
<label>4.</label>
<title>Conclusion</title>
<p>In this study, we found that a loss-of-function mutation in <italic>lin-4</italic> in <italic>C. elegans</italic> led to a reduction in fat storage and decreased locomotion, and our findings also suggested that ROS may play an important role in the life span of <italic>lin-4</italic> mutants.</p></sec></body>
<back>
<ack>
<p>This work was supported by grants from the National Natural Science Foundation of China (No. 30772364), the Natural Science Foundation of Jiangsu Province, China (No. BK2007230), the Foundation of Ministry of Education, China (No. 20070312001), and Nanjing Medical University (No. 07NMUZ024). We thank the Caenorhabditis Genetics Center (University of Minnesota) for providing strains.</p></ack>
<ref-list>
<title>References</title>
<ref id="b1-ijms-11-04814"><label>1.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Bartel</surname><given-names>DP</given-names></name></person-group><article-title>MicroRNAs: genomics, biogenesis, mechanism, and function</article-title><source>Cell</source><year>2004</year><volume>116</volume><fpage>281</fpage><lpage>297</lpage><pub-id pub-id-type="doi">10.1016/S0092-8674(04)00045-5</pub-id><pub-id pub-id-type="pmid">14744438</pub-id></citation></ref>
<ref id="b2-ijms-11-04814"><label>2.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ambros</surname><given-names>V</given-names></name></person-group><article-title>The functions of animal microRNAs</article-title><source>Nature</source><year>2004</year><volume>431</volume><fpage>350</fpage><lpage>355</lpage><pub-id pub-id-type="doi">10.1038/nature02871</pub-id><pub-id pub-id-type="pmid">15372042</pub-id></citation></ref>
<ref id="b3-ijms-11-04814"><label>3.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Wienholds</surname><given-names>E</given-names></name><name><surname>Plasterk</surname><given-names>RH</given-names></name></person-group><article-title>MicroRNA function in animal development</article-title><source>FEBS Lett</source><year>2005</year><volume>579</volume><fpage>5911</fpage><lpage>5922</lpage><pub-id pub-id-type="doi">10.1016/j.febslet.2005.07.070</pub-id><pub-id pub-id-type="pmid">16111679</pub-id></citation></ref>
<ref id="b4-ijms-11-04814"><label>4.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Heneghan</surname><given-names>HM</given-names></name><name><surname>Miller</surname><given-names>N</given-names></name><name><surname>Kerin</surname><given-names>MJ</given-names></name></person-group><article-title>Role of microRNAs in obesity and the metabolic syndrome</article-title><source>Obes. Rev</source><year>2010</year><volume>11</volume><fpage>354</fpage><lpage>361</lpage><pub-id pub-id-type="doi">10.1111/j.1467-789X.2009.00659.x</pub-id><pub-id pub-id-type="pmid">19793375</pub-id></citation></ref>
<ref id="b5-ijms-11-04814"><label>5.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Vella</surname><given-names>MC</given-names></name><name><surname>Slack</surname><given-names>FJC</given-names></name></person-group><article-title>Elegans microRNAs</article-title><source>Worm Book</source><year>2005</year><volume>21</volume><fpage>1</fpage><lpage>9</lpage></citation></ref>
<ref id="b6-ijms-11-04814"><label>6.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Olsen</surname><given-names>PH</given-names></name><name><surname>Ambros</surname><given-names>V</given-names></name></person-group><article-title>The <italic>lin-4</italic> regulatory RNA controls developmental timing in Caenorhabditis elegans by blocking LIN-14 protein synthesis after the initiation of translation</article-title><source>Dev. Biol</source><year>1999</year><volume>216</volume><fpage>671</fpage><lpage>680</lpage><pub-id pub-id-type="doi">10.1006/dbio.1999.9523</pub-id><pub-id pub-id-type="pmid">10642801</pub-id></citation></ref>
<ref id="b7-ijms-11-04814"><label>7.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Boehm</surname><given-names>M</given-names></name><name><surname>Slack</surname><given-names>F</given-names></name></person-group><article-title>A developmental timing microRNA and its target regulate life span in <italic>C. elegans</italic></article-title><source>Science</source><year>2005</year><volume>310</volume><fpage>1954</fpage><lpage>1957</lpage><pub-id pub-id-type="doi">10.1126/science.1115596</pub-id><pub-id pub-id-type="pmid">16373574</pub-id></citation></ref>
<ref id="b8-ijms-11-04814"><label>8.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Singhal</surname><given-names>V</given-names></name><name><surname>Schwenk</surname><given-names>WF</given-names></name><name><surname>Kumar</surname><given-names>S</given-names></name></person-group><article-title>Evaluation and management of childhood and adolescent obesity</article-title><source>Mayo Clin. Proc</source><year>2007</year><volume>82</volume><fpage>1258</fpage><lpage>1264</lpage><pub-id pub-id-type="doi">10.4065/82.10.1258</pub-id><pub-id pub-id-type="pmid">17908531</pub-id></citation></ref>
<ref id="b9-ijms-11-04814"><label>9.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Speakman</surname><given-names>J</given-names></name><name><surname>Hambly</surname><given-names>C</given-names></name><name><surname>Mitchell</surname><given-names>S</given-names></name><name><surname>Krol</surname><given-names>E</given-names></name></person-group><article-title>The contribution of animal models to the study of obesity</article-title><source>Lab. Anim</source><year>2008</year><volume>42</volume><fpage>413</fpage><lpage>432</lpage><pub-id pub-id-type="doi">10.1258/la.2007.006067</pub-id><pub-id pub-id-type="pmid">18782824</pub-id></citation></ref>
<ref id="b10-ijms-11-04814"><label>10.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>McKay</surname><given-names>RM</given-names></name><name><surname>McKay</surname><given-names>JP</given-names></name><name><surname>Avery</surname><given-names>L</given-names></name><name><surname>Graff</surname><given-names>JM</given-names></name></person-group><article-title><italic>C elegans</italic>: A model for exploring the genetics of fat storage</article-title><source>Dev. Cell</source><year>2003</year><volume>4</volume><fpage>131</fpage><lpage>142</lpage><pub-id pub-id-type="doi">10.1016/S1534-5807(02)00411-2</pub-id><pub-id pub-id-type="pmid">12530969</pub-id></citation></ref>
<ref id="b11-ijms-11-04814"><label>11.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Brooks</surname><given-names>KK</given-names></name><name><surname>Liang</surname><given-names>B</given-names></name><name><surname>Watts</surname><given-names>JL</given-names></name></person-group><article-title>The influence of bacterial diet on fat storage in <italic>C. elegans</italic></article-title><source>PLoS One</source><year>2009</year><volume>4</volume><fpage>e7545</fpage><pub-id pub-id-type="doi">10.1371/journal.pone.0007545</pub-id><pub-id pub-id-type="pmid">19844570</pub-id></citation></ref>
<ref id="b12-ijms-11-04814"><label>12.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Nomura</surname><given-names>T</given-names></name><name><surname>Horikawa</surname><given-names>M</given-names></name><name><surname>Shimamura</surname><given-names>S</given-names></name><name><surname>Hashimoto</surname><given-names>T</given-names></name><name><surname>Sakamoto</surname><given-names>K</given-names></name></person-group><article-title>Fat accumulation in <italic>Caenorhabditis elegans</italic> is mediated by SREBP homolog SBP-1</article-title><source>Genes Nutr</source><year>2009</year><volume>5</volume><fpage>17</fpage><lpage>27</lpage><pub-id pub-id-type="pmid">19936816</pub-id></citation></ref>
<ref id="b13-ijms-11-04814"><label>13.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Forsythe</surname><given-names>ME</given-names></name><name><surname>Love</surname><given-names>DC</given-names></name><name><surname>Lazarus</surname><given-names>BD</given-names></name><name><surname>Kim</surname><given-names>EJ</given-names></name><name><surname>Prinz</surname><given-names>WA</given-names></name><name><surname>Ashwell</surname><given-names>G</given-names></name><name><surname>Krause</surname><given-names>MW</given-names></name><name><surname>Hanover</surname><given-names>JA</given-names></name></person-group><article-title><italic>Caenorhabditis elegans</italic> ortholog of a diabetes susceptibility locus: <italic>oga-1</italic> (O-GlcNAcase) knockout impacts O-GlcNAc cycling, metabolism, and dauer</article-title><source>Proc. Natl. Acad. Sci. USA</source><year>2006</year><volume>103</volume><fpage>11952</fpage><lpage>11957</lpage><pub-id pub-id-type="doi">10.1073/pnas.0601931103</pub-id><pub-id pub-id-type="pmid">16882729</pub-id></citation></ref>
<ref id="b14-ijms-11-04814"><label>14.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Eberlé</surname><given-names>D</given-names></name><name><surname>Hegarty</surname><given-names>B</given-names></name><name><surname>Bossard</surname><given-names>P</given-names></name><name><surname>Ferré</surname><given-names>P</given-names></name><name><surname>Foufelle</surname><given-names>F</given-names></name></person-group><article-title>SREBP transcription factors: Master regulators of lipid homeostasis</article-title><source>Biochimie</source><year>2004</year><volume>86</volume><fpage>839</fpage><lpage>848</lpage><pub-id pub-id-type="doi">10.1016/j.biochi.2004.09.018</pub-id><pub-id pub-id-type="pmid">15589694</pub-id></citation></ref>
<ref id="b15-ijms-11-04814"><label>15.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Yang</surname><given-names>F</given-names></name><name><surname>Vought</surname><given-names>BW</given-names></name><name><surname>Satterlee</surname><given-names>JS</given-names></name><name><surname>Walker</surname><given-names>AK</given-names></name><name><surname>Jim Sun</surname><given-names>ZY</given-names></name><name><surname>Watts</surname><given-names>JL</given-names></name><name><surname>DeBeaumont</surname><given-names>R</given-names></name><name><surname>Saito</surname><given-names>RM</given-names></name><name><surname>Hyberts</surname><given-names>SG</given-names></name><name><surname>Yang</surname><given-names>S</given-names></name><name><surname>Macol</surname><given-names>C</given-names></name><name><surname>lyer</surname><given-names>L</given-names></name><name><surname>Tjian</surname><given-names>R</given-names></name><name><surname>van den Heuvel</surname><given-names>S</given-names></name><name><surname>Hart</surname><given-names>AC</given-names></name><name><surname>Wagner</surname><given-names>G</given-names></name><name><surname>Naar</surname><given-names>AM</given-names></name></person-group><article-title>An ARC/Mediator subunit required for SREBP control of cholesterol and lipid homeostasis</article-title><source>Nature</source><year>2006</year><volume>442</volume><fpage>700</fpage><lpage>704</lpage><pub-id pub-id-type="doi">10.1038/nature04942</pub-id><pub-id pub-id-type="pmid">16799563</pub-id></citation></ref>
<ref id="b16-ijms-11-04814"><label>16.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Wells</surname><given-names>L</given-names></name><name><surname>Whelan</surname><given-names>SA</given-names></name><name><surname>Hart</surname><given-names>GW</given-names></name></person-group><article-title>O-GlcNAc: A regulatory post-translational modification</article-title><source>Biochem. Biophys. Res. Commun</source><year>2003</year><volume>302</volume><fpage>435</fpage><lpage>441</lpage><pub-id pub-id-type="doi">10.1016/S0006-291X(03)00175-X</pub-id><pub-id pub-id-type="pmid">12615051</pub-id></citation></ref>
<ref id="b17-ijms-11-04814"><label>17.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>González-Polo</surname><given-names>RA</given-names></name><name><surname>Rodríguez-Martín</surname><given-names>A</given-names></name><name><surname>Morán</surname><given-names>JM</given-names></name><name><surname>Niso</surname><given-names>M</given-names></name><name><surname>Soler</surname><given-names>G</given-names></name><name><surname>Fuentes</surname><given-names>JM</given-names></name></person-group><article-title>Paraquat-induced apoptotic cell death in cerebellar granule cells</article-title><source>Brain Res</source><year>2004</year><volume>1011</volume><fpage>170</fpage><lpage>176</lpage><pub-id pub-id-type="doi">10.1016/j.brainres.2004.02.078</pub-id><pub-id pub-id-type="pmid">15157803</pub-id></citation></ref>
<ref id="b18-ijms-11-04814"><label>18.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Hekimi</surname><given-names>S</given-names></name><name><surname>Guarente</surname><given-names>L</given-names></name></person-group><article-title>Genetics and the specificity of the aging process</article-title><source>Science</source><year>2003</year><volume>299</volume><fpage>1351</fpage><lpage>1354</lpage><pub-id pub-id-type="doi">10.1126/science.1082358</pub-id><pub-id pub-id-type="pmid">12610295</pub-id></citation></ref>
<ref id="b19-ijms-11-04814"><label>19.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Braeckman</surname><given-names>BP</given-names></name><name><surname>Houthoofd</surname><given-names>K</given-names></name><name><surname>Brys</surname><given-names>K</given-names></name><name><surname>Lenaerts</surname><given-names>I</given-names></name><name><surname>de Vreese</surname><given-names>A</given-names></name><name><surname>van Eygen</surname><given-names>S</given-names></name><name><surname>Raes</surname><given-names>H</given-names></name><name><surname>Vanfleteren</surname><given-names>JR</given-names></name></person-group><article-title>No reduction of energy metabolism in Clk mutants</article-title><source>Mech. Ageing Dev</source><year>2003</year><volume>123</volume><fpage>1447</fpage><lpage>1456</lpage></citation></ref>
<ref id="b20-ijms-11-04814"><label>20.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ide</surname><given-names>T</given-names></name><name><surname>Tsutsui</surname><given-names>H</given-names></name><name><surname>Hayashidani</surname><given-names>S</given-names></name><name><surname>Kang</surname><given-names>D</given-names></name><name><surname>Suematsu</surname><given-names>N</given-names></name><name><surname>Nakamura</surname><given-names>K</given-names></name><name><surname>Utsumi</surname><given-names>H</given-names></name><name><surname>Hamasaki</surname><given-names>N</given-names></name><name><surname>Takeshita</surname><given-names>A</given-names></name></person-group><article-title>Mitochondrial DNA damage and dysfunction associated with oxidative stress in failing hearts after myocardial infarction</article-title><source>Circ. Res</source><year>2001</year><volume>88</volume><fpage>529</fpage><lpage>535</lpage><pub-id pub-id-type="doi">10.1161/01.RES.88.5.529</pub-id><pub-id pub-id-type="pmid">11249877</pub-id></citation></ref>
<ref id="b21-ijms-11-04814"><label>21.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Beckman</surname><given-names>KB</given-names></name><name><surname>Ames</surname><given-names>BN</given-names></name></person-group><article-title>The free radical theory of aging matures</article-title><source>Physiol. Rev</source><year>1998</year><volume>78</volume><fpage>547</fpage><lpage>581</lpage><pub-id pub-id-type="pmid">9562038</pub-id></citation></ref>
<ref id="b22-ijms-11-04814"><label>22.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Boyle</surname><given-names>JH</given-names></name><name><surname>Cohen</surname><given-names>N</given-names></name></person-group><article-title><italic>Caenorhabditis elegans</italic> body wall muscles are simple actuators</article-title><source>Biosyststems</source><year>2008</year><volume>94</volume><fpage>170</fpage><lpage>181</lpage><pub-id pub-id-type="doi">10.1016/j.biosystems.2008.05.025</pub-id></citation></ref>
<ref id="b23-ijms-11-04814"><label>23.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Finkel</surname><given-names>T</given-names></name><name><surname>Holbrook</surname><given-names>NJ</given-names></name></person-group><article-title>Oxidants, oxidative stress and the biology of aging</article-title><source>Nature</source><year>2000</year><volume>408</volume><fpage>239</fpage><lpage>247</lpage><pub-id pub-id-type="doi">10.1038/35041687</pub-id><pub-id pub-id-type="pmid">11089981</pub-id></citation></ref>
<ref id="b24-ijms-11-04814"><label>24.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Murakami</surname><given-names>S</given-names></name><name><surname>Murakami</surname><given-names>H</given-names></name></person-group><article-title>The effects of aging and oxidative stress on learning behavior in <italic>C. elegans</italic></article-title><source>Neurobiol. Aging</source><year>2005</year><volume>26</volume><fpage>899</fpage><lpage>905</lpage><pub-id pub-id-type="doi">10.1016/j.neurobiolaging.2004.08.007</pub-id><pub-id pub-id-type="pmid">15718049</pub-id></citation></ref>
<ref id="b25-ijms-11-04814"><label>25.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kam</surname><given-names>PCA</given-names></name><name><surname>Ferch</surname><given-names>NI</given-names></name></person-group><article-title>Apoptosis: Mechanisms and clinical implications</article-title><source>Anaesthesia</source><year>2000</year><volume>55</volume><fpage>1081</fpage><lpage>1093</lpage><pub-id pub-id-type="doi">10.1046/j.1365-2044.2000.01554.x</pub-id><pub-id pub-id-type="pmid">11069335</pub-id></citation></ref>
<ref id="b26-ijms-11-04814"><label>26.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Libina</surname><given-names>N</given-names></name><name><surname>Berman</surname><given-names>JR</given-names></name><name><surname>Kenyon</surname><given-names>C</given-names></name></person-group><article-title>Tissue-specific activities of <italic>C. elegans</italic> DAF-16 in the regulation of lifespan</article-title><source>Cell</source><year>2006</year><volume>115</volume><fpage>489</fpage><lpage>502</lpage></citation></ref>
<ref id="b27-ijms-11-04814"><label>27.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Hashimoto</surname><given-names>T</given-names></name><name><surname>Horikawa</surname><given-names>M</given-names></name><name><surname>Nomura</surname><given-names>T</given-names></name><name><surname>Sakamoto</surname><given-names>K</given-names></name></person-group><article-title>Nicotinamide adenine dinucleotide extends the lifespan of <italic>Caenorhabditis elegans</italic> mediated by <italic>sir-2.1</italic> and <italic>daf-16</italic></article-title><source>Biogerontology</source><year>2010</year><volume>11</volume><fpage>31</fpage><lpage>43</lpage><pub-id pub-id-type="doi">10.1007/s10522-009-9225-3</pub-id><pub-id pub-id-type="pmid">19370397</pub-id></citation></ref>
<ref id="b28-ijms-11-04814"><label>28.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Horikawa</surname><given-names>M</given-names></name><name><surname>Nomura</surname><given-names>T</given-names></name><name><surname>Hashimoto</surname><given-names>T</given-names></name><name><surname>Sakamoto</surname><given-names>K</given-names></name></person-group><article-title>Elongation and desaturation of fatty acids are critical in growth, lipid metabolism, and ontogeny of <italic>Caenorhabditis elegans</italic></article-title><source>J. Biochem</source><year>2008</year><volume>144</volume><fpage>149</fpage><lpage>158</lpage><pub-id pub-id-type="doi">10.1093/jb/mvn055</pub-id><pub-id pub-id-type="pmid">18424809</pub-id></citation></ref>
<ref id="b29-ijms-11-04814"><label>29.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Lee</surname><given-names>SJ</given-names></name><name><surname>Murphy</surname><given-names>CT</given-names></name><name><surname>Kenyon</surname><given-names>C</given-names></name></person-group><article-title>Glucose shortens the life span of <italic>C. elegans</italic> by downregulating DAF-16/FOXO activity and aquaporin gene expression</article-title><source>Cell Metab</source><year>2009</year><volume>10</volume><fpage>379</fpage><lpage>391</lpage><pub-id pub-id-type="doi">10.1016/j.cmet.2009.10.003</pub-id><pub-id pub-id-type="pmid">19883616</pub-id></citation></ref>
<ref id="b30-ijms-11-04814"><label>30.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Keaney</surname><given-names>M</given-names></name><name><surname>Matthijssens</surname><given-names>F</given-names></name><name><surname>Sharpe</surname><given-names>M</given-names></name><name><surname>Vanfleteren</surname><given-names>J</given-names></name><name><surname>Gems</surname><given-names>D</given-names></name></person-group><article-title>Superoxide dismutase mimetics elevate superoxide dismutase activity <italic>in vivo</italic> but do not retard aging in the nematode <italic>Caenorhabditis elegans</italic></article-title><source>Free Radic. Biol. Med</source><year>2004</year><volume>37</volume><fpage>239</fpage><lpage>250</lpage><pub-id pub-id-type="doi">10.1016/j.freeradbiomed.2004.04.005</pub-id><pub-id pub-id-type="pmid">15203195</pub-id></citation></ref>
<ref id="b31-ijms-11-04814"><label>31.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kampkötter</surname><given-names>A</given-names></name><name><surname>Nkwonkam</surname><given-names>CG</given-names></name><name><surname>Zurawski</surname><given-names>RF</given-names></name><name><surname>Timpel</surname><given-names>C</given-names></name><name><surname>Chovolou</surname><given-names>Y</given-names></name><name><surname>Watjen</surname><given-names>W</given-names></name><name><surname>Kahl</surname><given-names>R</given-names></name></person-group><article-title>Investigations of protective effects of the flavonoids quercetin and rutin on stress resistance in the model organism <italic>Caenorhabditis elegans</italic></article-title><source>Toxicology</source><year>2007</year><volume>234</volume><fpage>113</fpage><lpage>123</lpage><pub-id pub-id-type="doi">10.1016/j.tox.2007.02.006</pub-id><pub-id pub-id-type="pmid">17376580</pub-id></citation></ref>
<ref id="b32-ijms-11-04814"><label>32.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Miller</surname><given-names>KG</given-names></name><name><surname>Alfonso</surname><given-names>A</given-names></name><name><surname>Nguyen</surname><given-names>M</given-names></name><name><surname>Crowell</surname><given-names>JA</given-names></name><name><surname>Johnson</surname><given-names>CD</given-names></name><name><surname>Rand</surname><given-names>JB</given-names></name></person-group><article-title>A genetic selection for <italic>Caenorhabditis elegans</italic> synaptic transmission mutants</article-title><source>Proc. Natl. Acad. Sci. USA</source><year>1996</year><volume>93</volume><fpage>12593</fpage><lpage>12598</lpage><pub-id pub-id-type="doi">10.1073/pnas.93.22.12593</pub-id><pub-id pub-id-type="pmid">8901627</pub-id></citation></ref>
<ref id="b33-ijms-11-04814"><label>33.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ye</surname><given-names>K</given-names></name><name><surname>Ji</surname><given-names>CB</given-names></name><name><surname>Lu</surname><given-names>XW</given-names></name><name><surname>Ni</surname><given-names>YH</given-names></name><name><surname>Gao</surname><given-names>CL</given-names></name><name><surname>Chen</surname><given-names>XH</given-names></name><name><surname>Zhao</surname><given-names>YP</given-names></name><name><surname>Gu</surname><given-names>GX</given-names></name><name><surname>Guo</surname><given-names>XR</given-names></name></person-group><article-title>Resveratrol attenuates radiation damage in <italic>Caenorhabditis elegans</italic> by preventing oxidative stress</article-title><source>J. Radiat. Res</source><year>2010</year><volume>51</volume><fpage>473</fpage><lpage>479</lpage><pub-id pub-id-type="doi">10.1269/jrr.10009</pub-id><pub-id pub-id-type="pmid">20679743</pub-id></citation></ref>
<ref id="b34-ijms-11-04814"><label>34.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Dillin</surname><given-names>A</given-names></name><name><surname>Crawford</surname><given-names>DK</given-names></name><name><surname>Kenyon</surname><given-names>C</given-names></name></person-group><article-title>Timing requirements for insulin/IGF-1 signaling in <italic>C. elegans</italic></article-title><source>Science</source><year>2002</year><volume>298</volume><fpage>830</fpage><lpage>834</lpage><pub-id pub-id-type="doi">10.1126/science.1074240</pub-id><pub-id pub-id-type="pmid">12399591</pub-id></citation></ref>
<ref id="b35-ijms-11-04814"><label>35.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Taubert</surname><given-names>S</given-names></name><name><surname>van Gilst</surname><given-names>MR</given-names></name><name><surname>Hansen</surname><given-names>M</given-names></name><name><surname>Yamamoto</surname><given-names>KR</given-names></name></person-group><article-title>A Mediator subunit, MDT-15, integrates regulation of fatty acid metabolism by NHR-49-dependent and independent pathways in <italic>C. elegans</italic></article-title><source>Genes Dev</source><year>2006</year><volume>20</volume><fpage>1137</fpage><lpage>1149</lpage><pub-id pub-id-type="doi">10.1101/gad.1395406</pub-id><pub-id pub-id-type="pmid">16651656</pub-id></citation></ref>
<ref id="b36-ijms-11-04814"><label>36.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Livak</surname><given-names>KJ</given-names></name><name><surname>Schmittgen</surname><given-names>TD</given-names></name></person-group><article-title>Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) method</article-title><source>Methods</source><year>2001</year><volume>25</volume><fpage>402</fpage><lpage>408</lpage><pub-id pub-id-type="doi">10.1006/meth.2001.1262</pub-id><pub-id pub-id-type="pmid">11846609</pub-id></citation></ref></ref-list>
<sec sec-type="display-objects">
<title>Figures and Tables</title>
<fig id="f1-ijms-11-04814" position="float">
<label>Figure 1.</label>
<caption>
<p><italic>lin-4</italic> regulates fat storage. (<bold>A</bold>) Nile red staining of wild-type (N2) and <italic>lin-4</italic> mutant (e912) worms fed a normal diet of <italic>E. coli</italic> OP50 bacteria (left panel) or OP50 bacteria supplemented with glucose (middle) or fatty acid (right). Scale bar: 50 μm. <italic>n</italic> = 40 (<italic>n</italic>: number); (<bold>B</bold>) Quantification of the Nile red staining of fat in wild-type (N2) and <italic>lin-4</italic> mutant (e912) worms. <italic>n</italic> = 40. Error bars indicate standard error. <italic>* p</italic> &lt; 0.05.</p></caption><graphic xlink:href="ijms-11-04814f1.gif"/></fig>
<fig id="f2-ijms-11-04814" position="float">
<label>Figure 2.</label>
<caption>
<p>The expression of central regulation factors involved in fat storage control in nematodes. (<bold>A</bold>) Quantitative real-time PCR of sbp-1 in wild-type (N2) and <italic>lin-4</italic> mutant (e912) worms. <italic>n</italic> = 50 (<italic>n</italic>: number); (<bold>B</bold>) Quantitative real-time PCR of <italic>oga-1</italic> in wild-type (N2) and <italic>lin-4</italic> mutant (e912) worms. <italic>n</italic> = 40. Error bars indicate standard error. <italic>* p</italic> &lt; 0.05.</p></caption><graphic xlink:href="ijms-11-04814f2.gif"/></fig>
<fig id="f3-ijms-11-04814" position="float">
<label>Figure 3.</label>
<caption>
<p>The effect of <italic>lin-4</italic> on ROS level. (<bold>A</bold>) Intracellular ROS in <italic>C. elegans</italic> were measured using 2,7-dichlorofluorescein diacetate (DCF-DA; Molecular Probes). Sixty animals from each group were analyzed (<italic>n</italic> = 60). Scale bar: 100 μm; (<bold>B</bold>) results are expressed as mean ± SD of relative fluorescence units (RFU). <italic>* p</italic> &lt; 0.05.</p></caption><graphic xlink:href="ijms-11-04814f3a.gif"/><graphic xlink:href="ijms-11-04814f3b.gif"/></fig>
<fig id="f4-ijms-11-04814" position="float">
<label>Figure 4.</label>
<caption>
<p>Effects of <italic>lin-4</italic> mutation on copy number of mtDNA. The mtDNA copy number was measured in wild-type (N2) and <italic>lin-4</italic> mutant (e912) worms. Values represent the mtDNA copy number per worm. At least three replicates were performed. * <italic>p</italic> &lt; 0.05.</p></caption><graphic xlink:href="ijms-11-04814f4.gif"/></fig>
<fig id="f5-ijms-11-04814" position="float">
<label>Figure 5.</label>
<caption>
<p>Effects of <italic>lin-4</italic> mutation on life span and locomotion. (<bold>A</bold>) Red, survival of wild-type (N2); blue, survival after addition of paraquat to culture dishes of N2; green, survival of <italic>lin-4</italic> mutants (e912); purple, survival after addition of paraquat to culture dishes of <italic>lin-4</italic> mutants (e912). N2: <italic>n</italic> = 95, <italic>m</italic> = 16.71, <italic>M</italic> = 25. <italic>lin-4</italic> (e912): <italic>n</italic> = 100, <italic>m</italic> = 9.42, <italic>M</italic> = 16. N2 + Paraquat: <italic>n</italic> = 115, <italic>m</italic> = 9.07, <italic>M</italic> = 15. <italic>lin-4</italic> (e912) + Paraquat: <italic>n</italic> = 112, <italic>m</italic> = 4.65, <italic>M</italic> = 8. (<italic>n</italic>: number; <italic>m</italic>: mean life; <italic>M</italic>: maximum life); (<bold>B</bold>) N2 and <italic>lin-4</italic> (e912) showed a mean of 85 and 58 body bends, respectively, over 1 minute. * <italic>p</italic> &lt; 0.05.</p></caption><graphic xlink:href="ijms-11-04814f5.gif"/></fig>
<table-wrap id="t1-ijms-11-04814" position="float">
<label>Table 1.</label>
<caption>
<p>Sequences and TaqMan probes of mtDNA used in this study.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th align="left" valign="top"><bold>Symbol</bold></th>
<th align="left" valign="top"><bold>Wormbase</bold></th>
<th align="left" valign="top"><bold>Primers</bold></th></tr></thead>
<tbody>
<tr>
<td align="left" valign="top" rowspan="3">GDP2 (nuclear)</td>
<td align="left" valign="top" rowspan="3">K10B3.8.1</td>
<td align="left" valign="top">Probe:ACATAGTCGGCTCCAGAGGCTCC</td></tr>
<tr>
<td align="left" valign="top">Sense: CGCAGCACAAGATCAAGGTAG</td></tr>
<tr>
<td align="left" valign="top">Anti: AAGACTCCGGTGGACTCAAC</td></tr>
<tr>
<td align="left" valign="top" rowspan="3">CYTB (mitochondria)</td>
<td align="left" valign="top" rowspan="3">Mitochondrial</td>
<td align="left" valign="top">Probe:GGGTCAGCTTCAATAAACATCTCTGC</td></tr>
<tr>
<td align="left" valign="top">Sense: GGTTATATTGCCACGGTGATTATG</td></tr>
<tr>
<td align="left" valign="top">Anti:AATATCACTCTGGAACAATATGAACTG</td></tr></tbody></table></table-wrap>
<table-wrap id="t2-ijms-11-04814" position="float">
<label>Table 2.</label>
<caption>
<p>Sequences and target positions of the primers used for quantitative RT-PCR in this study.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th align="left" valign="top"><bold>Symbol</bold></th>
<th align="left" valign="top"><bold>Wormbase</bold></th>
<th align="left" valign="top"><bold>Primers</bold></th></tr></thead>
<tbody>
<tr>
<td align="left" valign="top" rowspan="2"><italic>Sbp-1</italic></td>
<td align="left" valign="top" rowspan="2">Y47D3B.7</td>
<td align="left" valign="top">Probe:CTTCGCCGCCTTCTCCTTACTCCTCG</td></tr>
<tr>
<td align="left" valign="top">Sense:CCACCACCTCATCACCACCAT</td></tr>
<tr>
<td align="left" valign="top" rowspan="2"><italic>Oga-1</italic></td>
<td align="left" valign="top" rowspan="2">T20B5.3a</td>
<td align="left" valign="top">Anti: CCTTCCGCTGTCTCCTGAATCA</td></tr>
<tr>
<td align="left" valign="top">Probe:CAGCCGAGTATTCACAGCCTATGGA</td></tr>
<tr>
<td align="left" valign="top" rowspan="5">actin</td>
<td align="left" valign="top" rowspan="5">T04C12.5</td>
<td align="left" valign="top">Sense:GAGCCTGTGCCTTCTGAGTTA</td></tr>
<tr>
<td align="left" valign="top">Anti: CAGTGATAGTCTTTGATTTCTTATTTCCT</td></tr>
<tr>
<td align="left" valign="top">Probe:CATCCTCCGTCTTGACTTGGCTGG</td></tr>
<tr>
<td align="left" valign="top">Sense:CAATCTACGAAGGATATGCCCTC</td></tr>
<tr>
<td align="left" valign="top">Anti: CTCAGCGGTGGTGGTGAA</td></tr></tbody></table></table-wrap></sec></back></article>
