<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE article PUBLIC "-//NLM//DTD Journal Publishing DTD v2.3 20070202//EN" "journalpublishing.dtd">
<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xml:lang="en" article-type="review-article">
<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">ijms</journal-id>
<journal-title>International Journal of Molecular Sciences</journal-title>
<abbrev-journal-title>Int. J. Mol. Sci.</abbrev-journal-title>
<issn pub-type="epub">1422-0067</issn>
<publisher>
<publisher-name>Molecular Diversity Preservation International (MDPI)</publisher-name></publisher></journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3390/ijms10031314</article-id>
<article-id pub-id-type="publisher-id">ijms-10-01314</article-id>
<article-categories>
<subj-group>
<subject>Review</subject></subj-group></article-categories>
<title-group>
<article-title>Mechanism of Suppression of Protein Aggregation by α-Crystallin</article-title></title-group>
<contrib-group>
<contrib contrib-type="author">
<name><surname>Markossian</surname><given-names>Kira A.</given-names></name><xref ref-type="aff" rid="af1-ijms-10-01314">1</xref><xref ref-type="corresp" rid="c1-ijms-10-01314">*</xref></contrib>
<contrib contrib-type="author">
<name><surname>Yudin</surname><given-names>Igor K.</given-names></name><xref ref-type="aff" rid="af2-ijms-10-01314">2</xref></contrib>
<contrib contrib-type="author">
<name><surname>Kurganov</surname><given-names>Boris I.</given-names></name><xref ref-type="aff" rid="af1-ijms-10-01314">1</xref></contrib></contrib-group>
<aff id="af1-ijms-10-01314">
<label>1</label> Bach Institute of Biochemistry, Russian Academy of Sciences, Leninsky pr. 33, 119071, Moscow, Russia</aff>
<aff id="af2-ijms-10-01314">
<label>2</label> Oil and Gas Research Institute, Russian Academy of Sciences, Gubkina st. 3, 117971, Moscow, Russia</aff>
<author-notes>
<corresp id="c1-ijms-10-01314">
<label>*</label>Author to whom correspondence should be addressed; E-Mail:
<email>markossian@inbi.ras.ru</email>; Fax: +7 495 954 2732</corresp></author-notes>
<pub-date pub-type="collection">
<month>3</month>
<year>2009</year></pub-date>
<pub-date pub-type="epub">
<day>19</day>
<month>3</month>
<year>2009</year></pub-date>
<volume>10</volume>
<issue>3</issue>
<fpage>1314</fpage>
<lpage>1345</lpage>
<history>
<date date-type="received">
<day>30</day>
<month>1</month>
<year>2009</year></date>
<date date-type="rev-recd">
<day>13</day>
<month>3</month>
<year>2009</year></date>
<date date-type="accepted">
<day>18</day>
<month>3</month>
<year>2009</year></date></history>
<permissions>
<copyright-statement>© 2009 by the authors; licensee Molecular Diversity Preservation International, Basel, Switzerland. This article is an open-access article distributed under the terms and conditions of the Creative Commons Attribution license (<ext-link xlink:href="http://creativecommons.org/licenses/by/3.0/" ext-link-type="uri">http://creativecommons.org/licenses/by/3.0/</ext-link>).</copyright-statement>
<copyright-year>2009</copyright-year>
<license license-type="open-access">
<p>This article is an open-access article distributed under the terms and conditions of the Creative Commons Attribution license (<ext-link xlink:href="http://creativecommons.org/licenses/by/3.0/" ext-link-type="uri">http://creativecommons.org/licenses/by/3.0/</ext-link>).</p></license></permissions>
<abstract>
<p>This review summarizes experimental data illuminating the mechanism of suppression of heat-induced protein aggregation by α-crystallin, one of the small heat shock proteins. The dynamic light scattering data show that the initial stage of thermal aggregation of proteins is the formation of the initial aggregates involving hundreds of molecules of the denatured protein. Further sticking of the starting aggregates proceeds in a regime of diffusion-limited cluster-cluster aggregation. The protective effect of α-crystallin is due to transition of the aggregation process to the regime of reaction-limited cluster-cluster aggregation, wherein the sticking probability for the colliding particles becomes lower than unity.</p></abstract>
<kwd-group>
<kwd>Chaperones</kwd>
<kwd>protein aggregation</kwd>
<kwd>α-crystallin</kwd></kwd-group></article-meta></front>
<body>
<sec sec-type="intro">
<label>1.</label>
<title>Introduction</title>
<p>α-Crystallin, the major protein of the mammalian eye lens, is present therein as a polydisperse heterooligomer of αA- and αB-crystallins, each of a molecular weight of about 20 kDa [<xref ref-type="bibr" rid="b1-ijms-10-01314">1</xref>]. In addition to its structural role in the lens, α-crystallin, as a member of the small heat shock protein (sHSP) family, performs the role of a chaperone and prevents aggregation and precipitation of β- and γ- crystallins (including their self-aggregation) [<xref ref-type="bibr" rid="b2-ijms-10-01314">2</xref>–<xref ref-type="bibr" rid="b6-ijms-10-01314">6</xref>]. Besides the lens, the αB subunit is expressed extensively in many other tissues, including the brain, lungs, spleen, cardiac and skeletal muscles [<xref ref-type="bibr" rid="b7-ijms-10-01314">7</xref>–<xref ref-type="bibr" rid="b10-ijms-10-01314">10</xref>], where it functions as a chaperone by interacting with several partially folded target proteins. <italic>In vitro,</italic> α-crystallin (αB- and αA-crystallins) suppresses formation and precipitation of disordered (amorphous) [<xref ref-type="bibr" rid="b2-ijms-10-01314">2</xref>,<xref ref-type="bibr" rid="b6-ijms-10-01314">6</xref>,<xref ref-type="bibr" rid="b11-ijms-10-01314">11</xref>–<xref ref-type="bibr" rid="b14-ijms-10-01314">14</xref>], as well as ordered protein aggregates (amyloid fibrils) [<xref ref-type="bibr" rid="b15-ijms-10-01314">15</xref>–<xref ref-type="bibr" rid="b17-ijms-10-01314">17</xref>].</p>
<p>The quaternary structure of α-crystallin depends on external conditions such as pH, temperature, ionic strength, concentration; the number of its subunits in each assemblage may vary from 15 to 50 [<xref ref-type="bibr" rid="b18-ijms-10-01314">18</xref>–<xref ref-type="bibr" rid="b22-ijms-10-01314">22</xref>]. Aquilina <italic>et al.</italic> [<xref ref-type="bibr" rid="b23-ijms-10-01314">23</xref>] have revealed a distribution, primarily of oligomers containing 24–33 subunits, with the dominant species composed of 28 subunits. Additionally, low levels of oligomers, as small as 10-mers and as large as 40-mers, were observed in αB-crystallin by mass spectrometry. Because of the polydispersity of α-crystallin, the true molecular mass and size of the isolated α-crystallin have not yet been determined and molecular mass values from 300 to 12,000 kDa are variously reported in the literature [<xref ref-type="bibr" rid="b24-ijms-10-01314">24</xref>–<xref ref-type="bibr" rid="b26-ijms-10-01314">26</xref>]. According to several studies, the quaternary assembly of α-crystallin is characterized by a relatively fast subunit-exchange under physiological conditions, indicating a certain degree of conformational flexibility of the α-crystallin protomers [<xref ref-type="bibr" rid="b21-ijms-10-01314">21</xref>,<xref ref-type="bibr" rid="b26-ijms-10-01314">26</xref>,<xref ref-type="bibr" rid="b27-ijms-10-01314">27</xref>]. This proceeds by monomer exchange among individual oligomers, which is temperature-dependent [<xref ref-type="bibr" rid="b21-ijms-10-01314">21</xref>,<xref ref-type="bibr" rid="b28-ijms-10-01314">28</xref>]. Heating of α-crystallin at 60 °C results in partial unfolding of the protein, which then doubles in molecular weight and increases in size [<xref ref-type="bibr" rid="b28-ijms-10-01314">28</xref>–<xref ref-type="bibr" rid="b30-ijms-10-01314">30</xref>]. Evans <italic>et al.</italic> [<xref ref-type="bibr" rid="b6-ijms-10-01314">6</xref>] showed that ordered secondary structure of α-crystallin increases with elevated temperatures up to 60 °C, and is rapidly lost at temperatures of 70 °C and above. According to Aquilina <italic>et al.</italic> [<xref ref-type="bibr" rid="b31-ijms-10-01314">31</xref>], the rate of subunit exchange is not the critical parameter for chaperone activity of mammalian α-crystallin, in contrast to mechanisms established for analogous proteins from plants, yeast and bacteria.</p>
<p>It is interesting that α-crystallin, like the β- and γ-crystallins, is also able to form fibrils [<xref ref-type="bibr" rid="b16-ijms-10-01314">16</xref>,<xref ref-type="bibr" rid="b32-ijms-10-01314">32</xref>,<xref ref-type="bibr" rid="b33-ijms-10-01314">33</xref>]. Thus, even αA- and αB-crystallins, which are highly stable proteins (like other crystallins), are prone to aggregate and form fibrils, despite their role in protein stabilization in the lens.</p>
<p>α-Crystallin can recognize and bind unfolded proteins over a range of temperatures, and a direct correlation between temperature, monomer exchange and the ability of α-crystallin to suppress amorphous aggregates formation has been demonstrated in a number of studies [<xref ref-type="bibr" rid="b11-ijms-10-01314">11</xref>,<xref ref-type="bibr" rid="b28-ijms-10-01314">28</xref>,<xref ref-type="bibr" rid="b34-ijms-10-01314">34</xref>,<xref ref-type="bibr" rid="b35-ijms-10-01314">35</xref>]. Devlin <italic>et al.</italic> [<xref ref-type="bibr" rid="b36-ijms-10-01314">36</xref>] showed that α-crystallin specifically inhibits nucleation-dependent aggregation of proteins. This ability has been demonstrated by suppression of aggregation of serine proteinase inhibitors by α-crystallin at 50 °C.</p>
<p>The hydrophobic interaction of α-crystallin with unfolded proteins plays a major role in the recognition of the target protein by the chaperone [<xref ref-type="bibr" rid="b34-ijms-10-01314">34</xref>,<xref ref-type="bibr" rid="b37-ijms-10-01314">37</xref>,<xref ref-type="bibr" rid="b38-ijms-10-01314">38</xref>]. The structural changes of α-crystallin in response to increased temperature support a possible “activation” step (an irreversible increase in ordered secondary structure, associated with assembly into the high-molecular-mass form) in the chaperone mechanism [<xref ref-type="bibr" rid="b6-ijms-10-01314">6</xref>,<xref ref-type="bibr" rid="b28-ijms-10-01314">28</xref>]. This form of the chaperone associates with partially folded βB<sub>2</sub>-crystallin [<xref ref-type="bibr" rid="b6-ijms-10-01314">6</xref>] and α-lactalbumin [<xref ref-type="bibr" rid="b39-ijms-10-01314">39</xref>] intermediates prior to protein aggregation. Abgar <italic>et al.</italic> [<xref ref-type="bibr" rid="b40-ijms-10-01314">40</xref>] concluded that interaction of α-crystallin with the destabilized protein is a two-step process. First the destabilized proteins are bound by α-crystallin so that non-specific aggregation of the destabilized protein is prevented. This complex is unstable, and a reorganization and inter-particle exchange of the peptides result in stable and soluble large particles.</p>
<p>α-Crystallin was found to prevent formation of amyloid fibrils by various proteins (e.g. amyloid β-peptide, apolipoprotein C-II, α-synuclein, κ-casein) [<xref ref-type="bibr" rid="b15-ijms-10-01314">15</xref>,<xref ref-type="bibr" rid="b41-ijms-10-01314">41</xref>–<xref ref-type="bibr" rid="b43-ijms-10-01314">43</xref>]. The mechanism by which αB-crystallin prevents growth of amyloid fibrils differs from the known mechanism by which it prevents the amorphous aggregation of proteins [<xref ref-type="bibr" rid="b42-ijms-10-01314">42</xref>,<xref ref-type="bibr" rid="b43-ijms-10-01314">43</xref>]. It has been shown that α-crystallin inhibits formation of amyloid fibrils by Aβ-(1–40) and apolipoprotein C-II due to interaction of the chaperone with the fibril nucleus, and does not inhibit the relatively rapid fibril elongation upon nucleation [<xref ref-type="bibr" rid="b42-ijms-10-01314">42</xref>,<xref ref-type="bibr" rid="b43-ijms-10-01314">43</xref>]. αB-Crystallin also prevents the fibril growth of β2-microglobulin under acidic conditions [<xref ref-type="bibr" rid="b43-ijms-10-01314">43</xref>].</p>
<p>The fibril-suppressing ability of αB-crystallin is temperature dependent, and the nature of the aggregating species with which it interacts is also important [<xref ref-type="bibr" rid="b15-ijms-10-01314">15</xref>]. The efficiency of α-crystallin in suppressing fibril formation by κ-casein and α-synuclein increases with temperature. This is consistent with an increased chaperone ability of α-crystallin at higher temperatures to protect target proteins from amorphous aggregation [<xref ref-type="bibr" rid="b35-ijms-10-01314">35</xref>]. It has been shown that αB-crystallin interrupted α-synuclein aggregation at its earliest stages, most likely by binding to partially folded monomers and thereby preventing their aggregation into fibrillar structures [<xref ref-type="bibr" rid="b15-ijms-10-01314">15</xref>].</p>
<p>The mechanism of interaction of α-crystallin with target proteins has been studied intensively, but details of the mechanism by which α-crystallin accomplishes its chaperone action have not been elucidated.</p>
<p>In the present review a new mechanism of thermal aggregation of globular oligomeric proteins is discussed. According to this mechanism the initial stage of protein aggregation is the stage of formation of the initial aggregates. The starting aggregates contain hundreds of denatured protein molecules. Further growth of protein aggregates is accomplished as a result of the sticking of the starting aggregates or the aggregates of higher order. This stage of protein aggregation proceeds in the diffusion-limited cluster-cluster aggregation (DLCA) regime. This regime implies that each collision results in the sticking of the interacting particles. In the frame of this mechanism of protein aggregation the protective action of α-crystallin is due to diminution of the size of the start aggregates and transition of the aggregation process from the DLCA regime to the reaction-limited cluster-cluster aggregation (RLCA) regime wherein the sticking probability for the colliding particles becomes lower than unity.</p></sec>
<sec>
<label>2.</label>
<title>Mechanisms of Protein Aggregation</title>
<p>One of the earliest studies of protein aggregation was that by London <italic>et al</italic>. [<xref ref-type="bibr" rid="b44-ijms-10-01314">44</xref>], who revealed an intermediate of the enzyme tryptophanase that aggregated after exposure to 8 M urea. More recently, the idea that partially folded intermediates might be responsible for protein aggregation has evolved [<xref ref-type="bibr" rid="b45-ijms-10-01314">45</xref>–<xref ref-type="bibr" rid="b54-ijms-10-01314">54</xref>]. Native proteins can unfold under the action of denaturing agents such as guanidine hydrochloride or urea, as well as due to thermal denaturation. Inappropriate exposure of hydrophobic sequences of unfolded proteins leads to formation of non-native conformations, which can interact with existing aggregates [<xref ref-type="bibr" rid="b55-ijms-10-01314">55</xref>]. The aggregates can be either amorphous structures, such as inclusion bodies [<xref ref-type="bibr" rid="b49-ijms-10-01314">49</xref>,<xref ref-type="bibr" rid="b56-ijms-10-01314">56</xref>–<xref ref-type="bibr" rid="b58-ijms-10-01314">58</xref>], or ordered fibrils such as amyloid plaques and prion particles [<xref ref-type="bibr" rid="b55-ijms-10-01314">55</xref>,<xref ref-type="bibr" rid="b59-ijms-10-01314">59</xref>,<xref ref-type="bibr" rid="b60-ijms-10-01314">60</xref>].</p>
<p>A distinctive characteristic of the kinetic curves of protein aggregation is the existence of an initial lag period. To explain such a peculiarity of protein aggregation, some models including a nucleation stage were proposed. These models are based on the nucleation-dependent polymerization model developed by Oosawa and Kasai [<xref ref-type="bibr" rid="b61-ijms-10-01314">61</xref>]. The reversible association of proteins involves the stage of formation of a nucleus, further growth of the associate proceeding by attachment of monomer to the growing associate. By analogy with the nucleation-dependent polymerization model, a nucleation-dependent aggregation model explaining the peculiarities of the kinetics of irreversible aggregation of proteins has been proposed [<xref ref-type="bibr" rid="b62-ijms-10-01314">62</xref>–<xref ref-type="bibr" rid="b69-ijms-10-01314">69</xref>]. The model of nucleation-dependent aggregation can be formulated as follows. The first step is unfolding of the protein molecule:
<disp-formula id="FD1">
<label>(1)</label>
<mml:math display="block">
<mml:mtext>N</mml:mtext>
<mml:mo>→</mml:mo>
<mml:mtext>U</mml:mtext>
<mml:mo>,</mml:mo></mml:math></disp-formula>where N and U are the native and unfolded states of the protein molecule. Association of several molecules U results in formation of a nucleus:
<disp-formula id="FD2">
<label>(2)</label>
<mml:math display="block">
<mml:mi>n</mml:mi>
<mml:mtext>U</mml:mtext>
<mml:mo>→</mml:mo>
<mml:msub>
<mml:mtext>U</mml:mtext>
<mml:mi>n</mml:mi></mml:msub>
<mml:mo>,</mml:mo></mml:math></disp-formula>where U<italic><sub>n</sub></italic> is a nucleus consisting of <italic>n</italic> monomers U. The stage of aggregate growth is expressed in the attachment of monomer U to the nucleus or aggregates of higher order:
<disp-formula id="FD3">
<label>(3)</label>
<mml:math display="block">
<mml:msub>
<mml:mtext>U</mml:mtext>
<mml:mi>n</mml:mi></mml:msub>
<mml:mover>
<mml:mo stretchy="true">→</mml:mo>
<mml:mrow>
<mml:mo>+</mml:mo>
<mml:mtext>U</mml:mtext></mml:mrow></mml:mover>
<mml:msub>
<mml:mtext>U</mml:mtext>
<mml:mrow>
<mml:mi>n</mml:mi>
<mml:mo>+</mml:mo>
<mml:mn>1</mml:mn></mml:mrow></mml:msub>
<mml:mover>
<mml:mo stretchy="true">→</mml:mo>
<mml:mrow>
<mml:mo>+</mml:mo>
<mml:mtext>U</mml:mtext></mml:mrow></mml:mover>
<mml:msub>
<mml:mtext>U</mml:mtext>
<mml:mrow>
<mml:mi>n</mml:mi>
<mml:mo>+</mml:mo>
<mml:mn>2</mml:mn></mml:mrow></mml:msub>
<mml:mover>
<mml:mo stretchy="true">→</mml:mo>
<mml:mrow>
<mml:mo>+</mml:mo>
<mml:mtext>U</mml:mtext></mml:mrow></mml:mover>
<mml:mo>…</mml:mo>
<mml:mover>
<mml:mo stretchy="true">→</mml:mo>
<mml:mrow>
<mml:mo>+</mml:mo>
<mml:mtext>U</mml:mtext></mml:mrow></mml:mover>
<mml:msub>
<mml:mtext>U</mml:mtext>
<mml:mi>m</mml:mi></mml:msub>
<mml:mo>.</mml:mo></mml:math></disp-formula>When all monomer U is exhausted, the aggregate of a limiting size U<italic><sub>m</sub></italic>, consisting of <italic>m</italic> monomers U, is formed. Theoretical analysis of the kinetics of nucleation-dependent aggregation has been performed by Kodaka [<xref ref-type="bibr" rid="b68-ijms-10-01314">68</xref>].</p>
<p>Ben-Zvi and Goloubinoff [<xref ref-type="bibr" rid="b70-ijms-10-01314">70</xref>] showed that sub-stoichiometric amounts of one fast co-aggregating protein can significantly increase thermal aggregation kinetics of otherwise soluble, slow-aggregating protein. The ability of aggregates to seed and propagate aggregation of other proteins is consistent with the idea that thermal aggregation of proteins includes the stage of nucleation.</p>
<p>A number of works are devoted to models of nucleation-dependent aggregation describing amyloid fibril formation [<xref ref-type="bibr" rid="b71-ijms-10-01314">71</xref>–<xref ref-type="bibr" rid="b77-ijms-10-01314">77</xref>]. Generation of oligomeric aggregation nuclei is considered as a key step at the onset of protein aggregation, accounting for the delay times of polymer appearance that are recorded by <italic>in vitro</italic> protein aggregation experiments. It has been shown that in the course of immunoglobulin light chain aggregation a relatively unfolded, but compact intermediate (characterized by decreased tertiary and secondary structure at pH below 3) leads to rapid formation of amyloid fibrils. The native-like intermediates, observed between pH 4 and 6, with little loss of secondary structure, but with significant tertiary structure changes, predominantly result in formation of amorphous aggregates [<xref ref-type="bibr" rid="b77-ijms-10-01314">77</xref>]. Amyloid fibril formation involves the ordered self-assembly of partially folded species, which are critical soluble precursors of fibrils [<xref ref-type="bibr" rid="b78-ijms-10-01314">78</xref>]. It is also indicated that fibril elongation involves addition of a partially unfolded intermediate, rather than a protein in the native state [<xref ref-type="bibr" rid="b79-ijms-10-01314">79</xref>]. Kumar <italic>et al.</italic> [<xref ref-type="bibr" rid="b80-ijms-10-01314">80</xref>] have studied amyloid fibril formation by the small protein barstar. Barstar forms a stable soluble oligomer at low pH, which can transform into protofibrils. The absence of a lag phase suggests that aggregation of stable soluble oligomer forms into protofibrils is not nucleation-dependent. The rate of aggregation increases with increasing protein concentration, but reaches the limit at high concentrations. An analysis of the dependence of the apparent rates of protofibril formation indicates that the slowest stage in protofibil formation is lateral association of linear aggregates. Overall, the study indicates that growth in the course of protofibril formation occurs step-wise through progressively larger and larger aggregates, via multiple pathways, and finally through lateral association of critical aggregates.</p>
<p>Since protein aggregates possess a higher light scattering ability than the original molecules, a convenient way to study protein aggregation kinetics is registration of the increment of the light scattering intensity or apparent optical absorbance. Some authors have tried to analyze the kinetic curves of protein aggregation assuming that proportionality between the apparent optical absorbance and the amount of the aggregated protein exists (for example, [<xref ref-type="bibr" rid="b65-ijms-10-01314">65</xref>,<xref ref-type="bibr" rid="b66-ijms-10-01314">66</xref>,<xref ref-type="bibr" rid="b81-ijms-10-01314">81</xref>]). However it is clear that more reliable information on the mechanism of protein aggregation may be obtained using methods that allow sizing the protein aggregates. On-line analysis of the kinetics of protein aggregation can be carried out using dynamic light scattering (DLS). There are numerous investigations of the aggregation kinetics for different proteins, where the size of protein aggregates was estimated by DLS [<xref ref-type="bibr" rid="b14-ijms-10-01314">14</xref>,<xref ref-type="bibr" rid="b52-ijms-10-01314">52</xref>,<xref ref-type="bibr" rid="b80-ijms-10-01314">80</xref>,<xref ref-type="bibr" rid="b82-ijms-10-01314">82</xref>–<xref ref-type="bibr" rid="b89-ijms-10-01314">89</xref>].</p>
<p>DLS is commonly used to determine the size of nanoparticles in a suspension by measuring the dynamics of the light-scattering intensity fluctuations. Colloidal particles or macromolecules suspended in fluid undergo Brownian motion. This motion causes fluctuations in the local concentration of the particles resulting in local non-homogeneities of the refractive index. This in turn leads to the light scattering phenomenon. The measured time-dependent autocorrelation function G2(τ) of the scattered light is a function of the delay time τ and for a single decay rate can be represented by the following equation:
<disp-formula id="FD4">
<label>(4)</label>
<mml:math display="block">
<mml:msub>
<mml:mi>G</mml:mi>
<mml:mn>2</mml:mn></mml:msub>
<mml:mo stretchy="false">(</mml:mo>
<mml:mi>τ</mml:mi>
<mml:mo stretchy="false">)</mml:mo>
<mml:mo>=</mml:mo>
<mml:mi>A</mml:mi>
<mml:mo stretchy="false">[</mml:mo>
<mml:mn>1</mml:mn>
<mml:mo>+</mml:mo>
<mml:mi>B</mml:mi>
<mml:mi> </mml:mi>
<mml:mtext>exp</mml:mtext>
<mml:mi> </mml:mi>
<mml:mo stretchy="false">(</mml:mo>
<mml:mo>−</mml:mo>
<mml:mn>2</mml:mn>
<mml:mo>Γ</mml:mo>
<mml:mi>τ</mml:mi>
<mml:mo stretchy="false">)</mml:mo>
<mml:mo stretchy="false">]</mml:mo>
<mml:mo>.</mml:mo></mml:math></disp-formula></p>
<p>This function describes light scattering in system of monodisperse spherical non-interacting particles. The time-independent baseline correlation level <italic>A</italic> is proportional to the square of the time-averaged intensity <italic>I</italic>. The factor <italic>B</italic> is called usually as the intercept of the autocorrelation function. This instrument factor is a measure of quality of light scattering conversion, which is possible to define as the relative coherence of the received scattered light. In accordance with definition <italic>B</italic> ≤ 1, practical value of <italic>B</italic> within 0.2–0.9 is acceptable for precise measurement of particle size.</p>
<p>The decay rate Γ of the time-dependent correlation function is directly related to the translation diffusion coefficient <italic>D</italic> of the particles:
<disp-formula id="FD5">
<label>(5)</label>
<mml:math display="block">
<mml:mo>Γ</mml:mo>
<mml:mo>=</mml:mo>
<mml:msubsup>
<mml:mi>D</mml:mi>
<mml:mi>q</mml:mi>
<mml:mn>2</mml:mn></mml:msubsup>
<mml:mo>,</mml:mo></mml:math></disp-formula>where <italic>q</italic> is the modulus of the scattering vector (
<inline-formula>
<mml:math>
<mml:mi>q</mml:mi>
<mml:mo>=</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:mn>4</mml:mn>
<mml:mo>π</mml:mo>
<mml:mtext>n</mml:mtext></mml:mrow>
<mml:mrow>
<mml:msub>
<mml:mi>λ</mml:mi>
<mml:mn>0</mml:mn></mml:msub></mml:mrow></mml:mfrac>
<mml:mtext>sin</mml:mtext>
<mml:mfrac>
<mml:mo>θ</mml:mo>
<mml:mn>2</mml:mn></mml:mfrac></mml:math></inline-formula>), <italic>n</italic> is the refractive index of the solvent, λ<sub>0</sub> is the wavelength of the incident light in vacuum and θ is the scattering angle.</p>
<p>The mean hydrodynamic radius of the particles, <italic>R</italic><sub>h</sub><italic>,</italic> then can be calculated using the Stokes-Einstein equation:
<disp-formula id="FD6">
<label>(6)</label>
<mml:math display="block">
<mml:mi>D</mml:mi>
<mml:mo>=</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:msub>
<mml:mi>k</mml:mi>
<mml:mtext>B</mml:mtext></mml:msub>
<mml:mi>T</mml:mi></mml:mrow>
<mml:mrow>
<mml:mn>6</mml:mn>
<mml:mo>π</mml:mo>
<mml:mo>η</mml:mo>
<mml:msub>
<mml:mi>R</mml:mi>
<mml:mtext>h</mml:mtext></mml:msub></mml:mrow></mml:mfrac>
<mml:mo>,</mml:mo></mml:math></disp-formula>where <italic>k</italic><sub>B</sub> is Boltzmann’s constant, <italic>T</italic> is the absolute temperature and η is the viscosity of the solvent. The size calculated from <xref ref-type="disp-formula" rid="FD6">Equation (6)</xref> is called the hydrodynamic radius. It may be larger than the radius of the bare particles because of possible layers of solvent, surfactant molecules or (for charged particles) adsorbed ions. In most cases these layers add a negligible correction to the size, except for the smallest sizes measurable. <xref ref-type="disp-formula" rid="FD4">Eqs. (4)</xref> and <xref ref-type="disp-formula" rid="FD5">(5)</xref> are valid for noninteracting spherical particles. If the particles are involved in an aggregation process, they certainly interact. However, these equations are still applicable to monitor the change of the apparent (“effective”) particle size if the characteristic time of aggregation kinetics is much larger than the time of the measurements.</p>
<p>Direct fitting of experimental data by <xref ref-type="disp-formula" rid="FD4">Equation (4)</xref> allows the effective average decay rate to be found. However in experimental practice it is important to know the polydispersity of the particles. Usually, light scattering in polydisperse multicomponent samples gives a multiexponential correlation function. The simple approximation with an appropriate multiexponent model is not effective due to serious mathematical complexity for solution of such, so-called, ill-posed problem. A few methods have suggested solving this problem. The most popular and simple is method of cumulants, which is based on cumulant expansion of the correlation function within average decay rate [<xref ref-type="bibr" rid="b90-ijms-10-01314">90</xref>,<xref ref-type="bibr" rid="b91-ijms-10-01314">91</xref>]. A final cumulant expression, suitable for fitting practice, is:
<disp-formula id="FD7">
<label>(7)</label>
<mml:math display="block">
<mml:msub>
<mml:mi>G</mml:mi>
<mml:mn>2</mml:mn></mml:msub>
<mml:mo stretchy="false">(</mml:mo>
<mml:mi>τ</mml:mi>
<mml:mo stretchy="false">)</mml:mo>
<mml:mo>=</mml:mo>
<mml:mi>A</mml:mi>
<mml:mrow>
<mml:mo>[</mml:mo>
<mml:mrow>
<mml:mn>1</mml:mn>
<mml:mo>+</mml:mo>
<mml:mi>B</mml:mi>
<mml:mi> </mml:mi>
<mml:mtext>exp</mml:mtext>
<mml:mo stretchy="false">(</mml:mo>
<mml:mo>−</mml:mo>
<mml:mn>2</mml:mn>
<mml:mover accent="true">
<mml:mo>Γ</mml:mo>
<mml:mo>¯</mml:mo></mml:mover>
<mml:mi>τ</mml:mi>
<mml:mo stretchy="false">)</mml:mo>
<mml:msup>
<mml:mrow>
<mml:mrow>
<mml:mo>(</mml:mo>
<mml:mrow>
<mml:mn>1</mml:mn>
<mml:mo>+</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:msub>
<mml:mo>μ</mml:mo>
<mml:mn>2</mml:mn></mml:msub></mml:mrow>
<mml:mrow>
<mml:mn>2</mml:mn>
<mml:mo>!</mml:mo></mml:mrow></mml:mfrac>
<mml:msup>
<mml:mi>τ</mml:mi>
<mml:mn>2</mml:mn></mml:msup>
<mml:mo>−</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:msub>
<mml:mo>μ</mml:mo>
<mml:mn>3</mml:mn></mml:msub></mml:mrow>
<mml:mrow>
<mml:mn>3</mml:mn>
<mml:mo>!</mml:mo></mml:mrow></mml:mfrac>
<mml:msup>
<mml:mi>τ</mml:mi>
<mml:mn>3</mml:mn></mml:msup></mml:mrow>
<mml:mo>)</mml:mo></mml:mrow></mml:mrow>
<mml:mn>2</mml:mn></mml:msup></mml:mrow>
<mml:mo>]</mml:mo></mml:mrow>
<mml:mo>,</mml:mo></mml:math></disp-formula>where Γ̅ is the average decay rate, μ<sub>2</sub> and μ<sub>3</sub> are the second and third cumulants. Cumulants μ<sub>2</sub> and μ<sub>3</sub> allow the parameters of a polydispersity distribution to be calculated: polydispersity index PI = μ<sub>2</sub>/Γ̅<sup>2</sup> characterizing the dimensionless width of the polydispersity distribution (see ISO standard [<xref ref-type="bibr" rid="b92-ijms-10-01314">92</xref>]) and asymmetry index (skewness) AI = μ<sub>2</sub>/μ<sub>3</sub>; Γ̅ characterizing the dimensionless asymmetry of the polydispersity distribution. Unfortunately, the most mathematically-rigorous method of cumulants can be used only for the unimodal relatively narrow particle size distributions. More universal method of the DLS data processing is based on the regularized Laplace inversion. This method allows finding polymodal particle size distributions with satisfactory reliability of fitting. There are a few such programs. The most popular CONTIN software was developed by S.W. Provencher many years ago. A new version of the regulation software DYNALS has been developed by A. Goldin (Alango, Israel; <ext-link xlink:href="http://www.photocor.com/dynals.htm" ext-link-type="uri">http://www.photocor.com/dynals.htm</ext-link>). The DYNALS package is well-proven and used by many researchers.</p>
<p>Features of the Photocor Complex DLS setup (Photocor Instruments Inc., USA) are typical in multipurpose installations for studying both static (intensity) and dynamic (time-dependent correlation function) light scattering [<xref ref-type="bibr" rid="b93-ijms-10-01314">93</xref>]. The optical bench and precision goniometer are based on a massive base. An He-Ne laser (Coherent, USA, Model 31-2082, 632.8 nm, 10 mW) and the focusing system are fixed on the bench. The thermostat and cell holder are coaxial with the goniometer axis. The temperature is controlled by the PID temperature controller Photocor-TC to within ±0.1 °C. The receiving system (photon counting system Photocor-PC2) is located on the rotating goniometer arm. The photon counting system consists of a set of pinholes for selection of aperture, a low-noise photomultiplier tube (PMT) and an amplifier-discriminator. To avoid the afterpulsing distortions the quasi-cross correlation scheme with two PMTs is used. The output signal produced by the photon counting system occurs as a sequence of standard pulses corresponding to escaped photoelectrons. The raw signal from the photon counting system is analyzed by a single-board correlator Photocor-FC (<ext-link xlink:href="http://www.photocor.com" ext-link-type="uri">http://www.photocor.com</ext-link>), which is plugged into a personal computer. The correlator is a multichannel device that performs real-time data processing and accumulation of the correlation function of the light scattering fluctuations. The correlator Photocor-FC has two time-scale modes of operation, i.e., a linear mode with equidistant points of the measured correlation function and a so called multiple-tau mode with the logarithmic order of the correlation points in time. Operation of the correlator in multiple-tau mode needs no tuning of time-scale and is suitable for measurements of multi-peak particle distributions. The linear scale of the correlator enables one to achieve maximum accuracy for measurements of a mono-modal narrow distribution. These cross-correlation system and fast correlator allow measuring particle size in very wide range of 1 nm to 5 μm. The personal computer performs data analysis and instrument control.</p>
<p>Consider, as an example, the kinetics of thermal aggregation of glyceraldehyde-3-phosphate dehydrogenase (GAPDH) from rabbit skeletal muscle. <xref ref-type="fig" rid="f1-ijms-10-01314">Figure 1</xref> shows the dependences of the light scattering intensity on time for GAPDH aggregation at 55 °C. These dependences were obtained at various concentrations of the protein in the interval from 0.05 to 0.4 mg/mL. Diminution of the light scattering intensity at rather high values of time is due to precipitation of large-sized protein aggregates.</p>
<p>According to the DLS data, the distribution of protein aggregates by size is unimodal, with the position of a maximum shifted towards the higher values of the hydrodynamic radius with increasing incubation time (<xref ref-type="fig" rid="f2-ijms-10-01314">Figure 2</xref>). Of special interest are the dependences of the hydrodynamic radius (<italic>R</italic><sub>h</sub>) of the protein aggregates on time (<xref ref-type="fig" rid="f3-ijms-10-01314">Figure 3</xref>).</p>
<p>It was important to elucidate whether the dependences of <italic>R</italic><sub>h</sub> on time approached the limiting value at high values of time. The analysis carried out for thermal aggregation of different proteins [<xref ref-type="bibr" rid="b14-ijms-10-01314">14</xref>,<xref ref-type="bibr" rid="b94-ijms-10-01314">94</xref>–<xref ref-type="bibr" rid="b97-ijms-10-01314">97</xref>] showed that above a definite point of time (<italic>t</italic> &gt; <italic>t</italic> *) the dependences of <italic>R</italic><sub>h</sub> on time followed the power law:
<disp-formula id="FD8">
<label>(8)</label>
<mml:math display="block">
<mml:msub>
<mml:mi>R</mml:mi>
<mml:mtext>h</mml:mtext></mml:msub>
<mml:mo>=</mml:mo>
<mml:msubsup>
<mml:mi>R</mml:mi>
<mml:mtext>h</mml:mtext>
<mml:mo>*</mml:mo></mml:msubsup>
<mml:msup>
<mml:mrow>
<mml:mo stretchy="false">[</mml:mo>
<mml:mn>1</mml:mn>
<mml:mo>+</mml:mo>
<mml:msub>
<mml:mi>K</mml:mi>
<mml:mn>2</mml:mn></mml:msub>
<mml:mo stretchy="false">(</mml:mo>
<mml:mi>t</mml:mi>
<mml:mo>−</mml:mo>
<mml:msup>
<mml:mi>t</mml:mi>
<mml:mo>*</mml:mo></mml:msup>
<mml:mo stretchy="false">)</mml:mo>
<mml:mo stretchy="false">]</mml:mo></mml:mrow>
<mml:mrow>
<mml:mn>1</mml:mn>
<mml:mo>/</mml:mo>
<mml:msub>
<mml:mi>d</mml:mi>
<mml:mtext>f</mml:mtext></mml:msub></mml:mrow></mml:msup>
<mml:mo>,</mml:mo></mml:math></disp-formula>where 
<inline-formula>
<mml:math>
<mml:msubsup>
<mml:mi>R</mml:mi>
<mml:mtext>h</mml:mtext>
<mml:mo>*</mml:mo></mml:msubsup></mml:math></inline-formula> is the value of <italic>R</italic><sub>h</sub> at <italic>t</italic> = <italic>t</italic>*, <italic>K</italic><sub>2</sub> is a constant and <italic>d</italic><sub>f</sub> is the fractal dimension of the protein aggregates. The fractal dimension is a structural characteristic of aggregates which are formed as a result of unordered interactions (random aggregation). The mass of an aggregate (<italic>M</italic>) formed in such a way is connected with its effective radius (<italic>R</italic>) by the following relationship: <italic>M</italic> ~ <italic>R</italic><sup><italic>d</italic><sub>f</sub></sup>. The value of <italic>d</italic><sub>f</sub> for GAPDH aggregation (<xref ref-type="fig" rid="f3-ijms-10-01314">Figure 3A</xref>) was found to be 1.79 ± 0.05. Such dependences of <italic>R</italic><sub>h</sub> on time coincide with the DLCA regime of aggregation [<xref ref-type="bibr" rid="b98-ijms-10-01314">98</xref>–<xref ref-type="bibr" rid="b102-ijms-10-01314">102</xref>]. Under this kinetic regime of aggregation each collision of protein clusters results in their sticking. The DLCA regime is characterized by the universal value of <italic>d</italic><sub>f</sub> (<italic>d</italic><sub>f</sub> ≈ 1.8) [<xref ref-type="bibr" rid="b98-ijms-10-01314">98</xref>,<xref ref-type="bibr" rid="b103-ijms-10-01314">103</xref>].</p>
<p>It is evidenced by <xref ref-type="fig" rid="f3-ijms-10-01314">Figure 3B</xref> that the initial parts of the dependences of the hydrodynamic radius of protein aggregates on time are linear. It should be noted that such dependences of hydrodynamic radius on time (initial linear parts followed by the parts described by power law) are typical of aggregation of colloids proceeding in the DLCA regime (see, for example, [<xref ref-type="bibr" rid="b108-ijms-10-01314">108</xref>]. The linear part of the dependence of <italic>R</italic><sub>h</sub> on time can be described by the following equation [<xref ref-type="bibr" rid="b95-ijms-10-01314">95</xref>]:
<disp-formula id="FD9">
<label>(9)</label>
<mml:math display="block">
<mml:msub>
<mml:mi>R</mml:mi>
<mml:mtext>h</mml:mtext></mml:msub>
<mml:mo>=</mml:mo>
<mml:msub>
<mml:mi>R</mml:mi>
<mml:mrow>
<mml:mtext>h</mml:mtext>
<mml:mo>,</mml:mo>
<mml:mn>0</mml:mn></mml:mrow></mml:msub>
<mml:mo stretchy="false">[</mml:mo>
<mml:mn>1</mml:mn>
<mml:mo>+</mml:mo>
<mml:mfrac>
<mml:mn>1</mml:mn>
<mml:mrow>
<mml:msub>
<mml:mi>t</mml:mi>
<mml:mrow>
<mml:mn>2</mml:mn>
<mml:mtext>R</mml:mtext></mml:mrow></mml:msub></mml:mrow></mml:mfrac>
<mml:mo stretchy="false">(</mml:mo>
<mml:mi>t</mml:mi>
<mml:mo>−</mml:mo>
<mml:msub>
<mml:mi>t</mml:mi>
<mml:mn>0</mml:mn></mml:msub>
<mml:mo stretchy="false">)</mml:mo>
<mml:mo stretchy="false">]</mml:mo>
<mml:mo>,</mml:mo></mml:math></disp-formula>where <italic>R</italic><sub>h,0</sub> is the hydrodynamic radius of the start aggregates, <italic>t</italic><sub>0</sub> is the point of time when the start aggregates appear, and <italic>t</italic><sub>2R</sub> is the time interval over which the hydrodynamic radius of the protein aggregates increases from <italic>R</italic><sub>h,0</sub> to 2<italic>R</italic><sub>h,0</sub>. Parameter <italic>t</italic><sub>2R</sub> characterizes the rate of aggregation. The higher the 1/<italic>t</italic><sub>2R</sub> value, the higher is the aggregation rate. Knowing the <italic>R</italic><sub>h,0</sub> value, we can calculate parameters <italic>t</italic><sub>0</sub> and <italic>t</italic><sub>2R</sub>. In the case of thermal aggregation of GAPDH (<xref ref-type="fig" rid="f3-ijms-10-01314">Figure 3B</xref>) the increase in protein concentration resulted in diminution of the lag period characterized by parameter <italic>t</italic><sub>0</sub> and the increase in the aggregation rate characterized by the 1/<italic>t</italic><sub>2R</sub> value.</p>
<p>Analysis of the light scattering intensity versus the hydrodynamic radius of the protein aggregates plots lead to an important conclusion about the mechanism of protein thermal aggregation.</p>
<p>As is seen from <xref ref-type="fig" rid="f4-ijms-10-01314">Figure 4</xref>, the protein aggregates of rather large size are present in the system at the initial moment of the increment of the light scattering intensity (<italic>I</italic>). These initial aggregates were called “starting aggregates” [<xref ref-type="bibr" rid="b95-ijms-10-01314">95</xref>]. The hydrodynamic radius of the starting aggregates (<italic>R</italic><sub>h,0</sub>) corresponds to the length cut off on the abscissa axis by the linear dependence of <italic>I</italic> on <italic>R</italic><sub>h</sub>. <italic>R</italic><sub>h,0</sub> remained practically constant at variation of the GAPDH concentration in the interval from 0.05 to 0.4 mg/mL and was found to be 22 ± 1nm (<xref ref-type="fig" rid="f4-ijms-10-01314">Figure 4</xref>).</p>
<p>In the framework of the proposed mechanism of protein aggregation it becomes clear why the dependences of the light scattering intensity on time tend to level off at rather high values of time. The light scattering ability of the protein aggregate increases with the increase in the aggregate size. However diminution of particle concentration takes place because of their sticking. As a result we observe an apparent leveling off for the light scattering intensity versus time plots. It is significant that this “leveling off does not indicate the completion of the aggregation process. If we measure the size of protein aggregates on the “plateau”, we shall find that the growth of aggregates continues.</p>
<p>Thermal aggregation of aspartate aminotransferase from pig heart mitochondria (mAAT) may serve as another example demonstrating the importance of the light scattering intensity versus the hydrodynamic radius plots and supporting the idea of the start aggregate formation as an initial stage of protein aggregation [<xref ref-type="bibr" rid="b109-ijms-10-01314">109</xref>]. <xref ref-type="fig" rid="f5-ijms-10-01314">Figure 5</xref> shows the dependences of the light scattering intensity on time for mAAT aggregation at 60 °C. The dependences were obtained at various concentrations of mAAT in the interval from 0.05 to 0.4 mg/mL.</p>
<p>The ascending part of the dependence of the light scattering intensity (<italic>I</italic>) on time (before the precipitation of large-sized aggregates) obeys the exponential law [<xref ref-type="bibr" rid="b65-ijms-10-01314">65</xref>]:
<disp-formula id="FD10">
<label>(10)</label>
<mml:math display="block">
<mml:mi>I</mml:mi>
<mml:mo>=</mml:mo>
<mml:msub>
<mml:mi>I</mml:mi>
<mml:mrow>
<mml:mtext>lim</mml:mtext></mml:mrow></mml:msub>
<mml:mo stretchy="false">[</mml:mo>
<mml:mn>1</mml:mn>
<mml:mo>−</mml:mo>
<mml:mtext>exp</mml:mtext>
<mml:mo stretchy="false">(</mml:mo>
<mml:mo>−</mml:mo>
<mml:msub>
<mml:mi>k</mml:mi>
<mml:mtext>I</mml:mtext></mml:msub>
<mml:mi>t</mml:mi>
<mml:mo stretchy="false">)</mml:mo>
<mml:mo stretchy="false">]</mml:mo>
<mml:mo>,</mml:mo></mml:math></disp-formula>where <italic>I</italic><sub>lim</sub> is the limiting value of <italic>I</italic> at <italic>t</italic> → ∞ and <italic>k</italic><sub>I</sub> is the rate constant of the first order. The upper abscissa axis (<xref ref-type="fig" rid="f5-ijms-10-01314">Figure 5</xref>) shows the portion of the denatured protein (γ<sub>den</sub>) calculated from the data of differential scanning calorimetry (DSC). As has been shown by Golub <italic>et al</italic>. [<xref ref-type="bibr" rid="b110-ijms-10-01314">110</xref>], the portion of the denatured protein is identical to the portion of the aggregated protein calculated from measurements of the optical absorbance of the heated protein solution after 30 min centrifugation at 20,000 g. The analysis of the data presented in <xref ref-type="fig" rid="f5-ijms-10-01314">Figure 5</xref> using <xref ref-type="disp-formula" rid="FD10">Equation (10)</xref> shows that the increment of the light scattering intensity is terminated even before the portion of the denatured protein reaches 22% [<xref ref-type="bibr" rid="b109-ijms-10-01314">109</xref>].</p>
<p>mAAT aggregation is accompanied by the growth of protein aggregates (<xref ref-type="fig" rid="f6-ijms-10-01314">Figure 6</xref>). As in the case of GAPDH thermal aggregation, the dependences of <italic>R</italic><sub>h</sub> on time involve the initial linear parts followed by the parts which are described by power law (<xref ref-type="disp-formula" rid="FD8">Equation 8</xref>) with <italic>d</italic><sub>f</sub> = 1.82 ± 0.02. The value of <italic>d</italic><sub>f</sub> (the fractal dimension of the aggregates) indicates that mAAT aggregation proceeds in the DLCA regime.</p>
<p>The width of the size distribution of protein aggregates formed in the course of mAAT aggregation may be characterized by the polydispersity index (PI) [<xref ref-type="bibr" rid="b92-ijms-10-01314">92</xref>]. The temporal character of the changes in the PI value (<xref ref-type="fig" rid="f7-ijms-10-01314">Figure 7</xref>) shows that two parts of the dependences of <italic>R</italic><sub>h</sub> on time correspond to different physical processes proceeding in the system. The increase in the <italic>R</italic><sub>h</sub> value over the initial linear part of the dependence of <italic>R</italic><sub>h</sub> on time is accompanied by the increase in the PI value. The broadening of the distribution of the protein aggregates by size in this time interval is due to the fact that two processes, namely, formation of new start aggregates and their sticking, proceed simultaneously. At <italic>t</italic> &gt; <italic>t*</italic> the prevailing process is the sticking of the protein aggregates accompanied by the decrease in the PI value. The limiting value of PI at <italic>t</italic> → ∞ was found to be 0.14 ± 0.01. Such a low PI value is typical of aggregation of colloids proceeding in the DLCA regime [<xref ref-type="bibr" rid="b98-ijms-10-01314">98</xref>].</p>
<p>Analysis of the dependence of the hydrodynamic radius of the protein aggregates on time is of considerable importance for understanding the mechanism of protein aggregation. As discussed above, in the case of thermal aggregation of GAPDH and mAAT, dependences of <italic>R</italic><sub>h</sub> on time follow the power law with <italic>d</italic><sub>f</sub> parameter close to 1.8. A similar picture was observed for thermal aggregation of β<sub>L</sub>-crystallin from bovine eye lens [<xref ref-type="bibr" rid="b95-ijms-10-01314">95</xref>], tobacco mosaic virus coat protein [<xref ref-type="bibr" rid="b96-ijms-10-01314">96</xref>] and glycogen phosphorylase <italic>b</italic> (Ph<italic>b</italic>) from rabbit skeletal muscle [<xref ref-type="bibr" rid="b97-ijms-10-01314">97</xref>,<xref ref-type="bibr" rid="b111-ijms-10-01314">111</xref>]. Thus one can assume that thermal aggregation of proteins generally proceeds in the DLCA regime.</p>
<p>Construction of the light scattering intensity versus the hydrodynamic radius plots allowed sizing the start aggregates formed in the course of thermal aggregation of mAAT (<xref ref-type="fig" rid="f8-ijms-10-01314">Figure 8</xref>). The hydrodynamic radius of the start aggregates (<italic>R</italic><sub>h,0</sub>) may be calculated from the length cut off on the abscissa axis by the linear dependence of <italic>I</italic> on <italic>R</italic><sub>h</sub>. The <italic>R</italic><sub>h,0</sub> value was found to be 79 ± 3 nm. It should be noted that the hydrodynamic radius of the native dimeric molecule of mAAT with molecular mass of 91.2 kDa under non-denaturing conditions is 4.13 ± 0.18 nm. A rough estimate of the number of unfolded mAAT monomers in the start aggregate gives the value of 1030 ± 100.</p>
<p>The light scattering intensity versus the hydrodynamic radius plots were also used for estimation of the start aggregate size for thermal aggregation of β<sub>L</sub>-crystallin from bovine eye lens [<xref ref-type="bibr" rid="b95-ijms-10-01314">95</xref>], tobacco mosaic virus coat protein [<xref ref-type="bibr" rid="b96-ijms-10-01314">96</xref>] and Ph<italic>b</italic> [<xref ref-type="bibr" rid="b112-ijms-10-01314">112</xref>].</p>
<p>To obtain more reliable information on the stage of the starting aggregate formation, conditions had to be chosen, whereby the simultaneous registration of the native enzyme and starting aggregates was possible. For this purpose aggregation of GAPDH (1 mg/mL) at 45 °C was studied [<xref ref-type="bibr" rid="b113-ijms-10-01314">113</xref>]. The time of accumulation of the autocorrelation function was 30 s. Over first four minutes only the native GAPDH tetramer with <italic>R</italic><sub>h</sub> = 5.4 ± 0.3 nm was detected (<xref ref-type="fig" rid="f8-ijms-10-01314">Figure 8A</xref>). At <italic>t</italic> = 5 min the starting aggregates with <italic>R</italic><sub>h</sub> = 97.0 ± 0.2 nm appeared. Over the interval from 5 to 8 minutes the size of the protein aggregates remained constant. At <italic>t</italic> &gt; 8 min the size of the protein aggregates began to increase because of the sticking of the starting aggregates (<xref ref-type="fig" rid="f9-ijms-10-01314">Figure 9B and C</xref> and <xref ref-type="fig" rid="f10-ijms-10-01314">Figure 10</xref>). These data demonstrate that formation of the starting aggregates proceeds on the all-or-none principle without accumulation of intermediates.</p>
<p>Sluzky <italic>et al</italic>. [<xref ref-type="bibr" rid="b114-ijms-10-01314">114</xref>] were the first to observe formation of primary protein aggregates with the hydrodynamic radius of 85 ± 10 nm, when studying insulin aggregation upon shaking at 37 °C. When studying the thermal aggregation of β-lactoglobulin at pH 7.0 by means of size exclusion chromatography, it was shown that there was a clear separation between a narrow peak that corresponded to residual native protein and a broad peak that corresponded to the aggregates [<xref ref-type="bibr" rid="b86-ijms-10-01314">86</xref>,<xref ref-type="bibr" rid="b115-ijms-10-01314">115</xref>–<xref ref-type="bibr" rid="b117-ijms-10-01314">117</xref>]. This observation implied that the aggregates of the minimum size contained many monomers, and that no or very few stable oligomers were formed. In accordance with these data, the authors supposed that the first stage of thermal aggregation of β-lactoglobulin is the step of primary aggregate formation. Further association of primary aggregates gives large self-similar aggregates with fractal dimension <italic>d</italic><sub>f</sub> of 1.7 in the absence of salt [<xref ref-type="bibr" rid="b117-ijms-10-01314">117</xref>]. Although the primary aggregates postulated in the noted works [<xref ref-type="bibr" rid="b86-ijms-10-01314">86</xref>,<xref ref-type="bibr" rid="b115-ijms-10-01314">115</xref>–<xref ref-type="bibr" rid="b118-ijms-10-01314">118</xref>] are cross-linked by intermolecular disulfide bonds (in pH range 6.4-8.0), such aggregates are evidently similar to the start aggregates we observed for β<sub>L</sub>-crystallin and other proteins [<xref ref-type="bibr" rid="b14-ijms-10-01314">14</xref>,<xref ref-type="bibr" rid="b95-ijms-10-01314">95</xref>].</p>
<p>On the basis of the data of Durand <italic>et al</italic>. [<xref ref-type="bibr" rid="b118-ijms-10-01314">118</xref>] on the sensitivity of sticking of the primary aggregates to variation of ionic strength, one can assume that the starting aggregates may be sufficiently stable at low ionic strength values. From this point of view it is of interest to discuss the properties of the so-called inactivated actin. Turoverov <italic>et al</italic>. [<xref ref-type="bibr" rid="b119-ijms-10-01314">119</xref>] observed that 60 min incubation of rabbit skeletal muscle actin (5 mM Tris-HCl, pH 8.2) at 60 °C resulted in the formation of relatively stable particles with average sedimentation coefficient of 20 S (inactivated actin). The size of particles of inactivated actin was independent of the protein concentration (within the limits 0.05–1.0 mg/mL). A dramatic increase in 1-anilinonaphthalene-8-sulfonate binding to inactivated actin, in comparison with native and unfolded protein, indicated that the inactivated actin had solvent-exposed hydrophobic clusters on the surface. In our opinion inactivated actin may be considered as a “frozen” starting aggregate.</p>
<p>Thus, investigation of the kinetics of thermal aggregation of proteins by DLS allowed proposing the mechanism of protein aggregation demonstrated in <xref ref-type="fig" rid="f11-ijms-10-01314">Figure 11</xref> [<xref ref-type="bibr" rid="b14-ijms-10-01314">14</xref>,<xref ref-type="bibr" rid="b95-ijms-10-01314">95</xref>]. The initial stage of the aggregation process is formation of the starting aggregates. Further sticking of the starting aggregates and aggregates of higher order proceeds in the DLCA regime.</p></sec>
<sec>
<label>3.</label>
<title>Mechanism of Protein Aggregation in the Presence of α-crystallin</title>
<p>Suppression of thermal aggregation of proteins by α-crystallin is a well-studied phenomenon [<xref ref-type="bibr" rid="b2-ijms-10-01314">2</xref>,<xref ref-type="bibr" rid="b3-ijms-10-01314">3</xref>,<xref ref-type="bibr" rid="b11-ijms-10-01314">11</xref>,<xref ref-type="bibr" rid="b28-ijms-10-01314">28</xref>,<xref ref-type="bibr" rid="b34-ijms-10-01314">34</xref>,<xref ref-type="bibr" rid="b35-ijms-10-01314">35</xref>]. <xref ref-type="fig" rid="f12-ijms-10-01314">Figure 12</xref> shows the effect of α-crystallin on aggregation of mAAT at 60 °C [<xref ref-type="bibr" rid="b109-ijms-10-01314">109</xref>]. The addition of α-crystallin results in a lower increment of the light scattering intensity in time.</p>
<p>DLS made it possible to characterize the change in the distribution of the protein aggregates by size in the course of mAAT aggregation in the presence of α-crystallin [<xref ref-type="bibr" rid="b109-ijms-10-01314">109</xref>]. At low times of incubation the distribution of protein aggregates by size was unimodal (<xref ref-type="fig" rid="f13-ijms-10-01314">Figure 13A</xref> and B; incubation times were 100 and 200 min). However, the splitting of protein aggregate population into two components took place in the course of the aggregation process (<xref ref-type="fig" rid="f13-ijms-10-01314">Figure 13C</xref> and D; incubation times were 300 and 350 min).</p>
<p>It should be noted that bimodal character of distribution of the protein aggregates at rather high values of the incubation time was also observed for thermal aggregation of β<sub>L</sub>-crystallin from bovine eye lens [<xref ref-type="bibr" rid="b95-ijms-10-01314">95</xref>] and GAPDH from rabbit skeletal muscle [<xref ref-type="bibr" rid="b14-ijms-10-01314">14</xref>].</p>
<p>The distinctive property of the dependences of the protein aggregate hydrodynamic radius on time for mAAT aggregation in the presence of α-crystallin is that the initial parts of these dependences follow the exponential law:
<disp-formula id="FD11">
<label>(11)</label>
<mml:math display="block">
<mml:msub>
<mml:mi>R</mml:mi>
<mml:mtext>h</mml:mtext></mml:msub>
<mml:mo>=</mml:mo>
<mml:msub>
<mml:mi>R</mml:mi>
<mml:mrow>
<mml:mtext>h</mml:mtext>
<mml:mo>,</mml:mo>
<mml:mn>0</mml:mn></mml:mrow></mml:msub>
<mml:mrow>
<mml:mo>{</mml:mo>
<mml:mrow>
<mml:mtext>exp</mml:mtext>
<mml:mrow>
<mml:mo>[</mml:mo>
<mml:mrow>
<mml:mfrac>
<mml:mrow>
<mml:mtext>ln</mml:mtext>
<mml:mi> </mml:mi>
<mml:mn>2</mml:mn></mml:mrow>
<mml:mrow>
<mml:msub>
<mml:mi>t</mml:mi>
<mml:mrow>
<mml:mn>2</mml:mn>
<mml:mtext>R</mml:mtext></mml:mrow></mml:msub></mml:mrow></mml:mfrac>
<mml:mo stretchy="false">(</mml:mo>
<mml:mi>t</mml:mi>
<mml:mo>−</mml:mo>
<mml:msub>
<mml:mi>t</mml:mi>
<mml:mn>0</mml:mn></mml:msub>
<mml:mo stretchy="false">)</mml:mo></mml:mrow>
<mml:mo>]</mml:mo></mml:mrow></mml:mrow>
<mml:mo>}</mml:mo></mml:mrow>
<mml:mo>,</mml:mo></mml:math></disp-formula>where <italic>R</italic><sub>h,0</sub> is the hydrodynamic radius of the initial particles participating in the aggregation process, <italic>t</italic><sub>0</sub> is the duration of the lag period for the aggregation process and <italic>t</italic><sub>2</sub><italic><sub>R</sub></italic> is the time interval over which the <italic>R</italic><sub>h</sub> value of aggregates is doubled. Parameter <italic>t</italic><sub>2</sub><italic><sub>R</sub></italic> characterizes the rate of aggregation. The higher 1/<italic>t</italic><sub>2</sub><italic><sub>R</sub></italic> value, the higher is the rate of aggregation. If parameter <italic>R</italic><sub>h,0</sub> is known, parameter <italic>t</italic><sub>0</sub> may be calculated using <xref ref-type="disp-formula" rid="FD11">Equation (11)</xref>. The solid curves in the insets in <xref ref-type="fig" rid="f14-ijms-10-01314">Figure 14A</xref>-C are calculated from <xref ref-type="disp-formula" rid="FD11">Equation (11)</xref>. The 1/<italic>t</italic><sub>2</sub><italic><sub>R</sub></italic> value decreased from 1.0 to 0.07 min<sup>−1</sup>, when the concentration of α-crystallin increased from 0.15 to 0.4 mg/mL.</p>
<p>The exponential character of the dependence of the hydrodynamic radius of the protein aggregates on time indicates that the aggregation process proceeds in the regime of reaction-limited cluster-cluster aggregation (RLCA) [<xref ref-type="bibr" rid="b98-ijms-10-01314">98</xref>,<xref ref-type="bibr" rid="b101-ijms-10-01314">101</xref>,<xref ref-type="bibr" rid="b108-ijms-10-01314">108</xref>,<xref ref-type="bibr" rid="b120-ijms-10-01314">120</xref>]. Fulfillment of the RLCA regime means that the sticking probability for the colliding particles is lower than unity. It should be noted that the exponential character of the dependences of the hydrodynamic radius of the protein aggregates on time was also observed for thermal aggregation of β<sub>L</sub>-crystallin [<xref ref-type="bibr" rid="b95-ijms-10-01314">95</xref>], GAPDH [<xref ref-type="bibr" rid="b14-ijms-10-01314">14</xref>] and Ph<italic>b</italic> [<xref ref-type="bibr" rid="b97-ijms-10-01314">97</xref>] studied in the presence of α-crystallin.</p>
<p><xref ref-type="fig" rid="f14-ijms-10-01314">Figure 14</xref> shows the dependences of the hydrodynamic radius of the protein aggregates on time obtained for aggregation of mAAT (0.2 mg/mL) in the presence of various concentrations of α-crystallin in the interval from 0.1 to 0.4 mg/mL [<xref ref-type="bibr" rid="b109-ijms-10-01314">109</xref>]. As is evident from this Figure, a clearly expressed splitting of the protein aggregate population into two components at rather high values of incubation time was observed at the α-crystallin concentrations of 0.1, 0.15 and 0.2 mg/mL (panels A, B and C). The point of time when such a splitting occurred was designated as <italic>t</italic><sub>crit</sub> [<xref ref-type="bibr" rid="b95-ijms-10-01314">95</xref>]. At α-crystallin concentration of 0.4 mg/mL, the growth of protein aggregates was strongly suppressed.</p>
<p>It should be noted that bimodal character of distribution of the protein aggregates at rather high values of the incubation time was also observed for thermal aggregation of β<sub>L</sub>-crystallin from bovine eye lens [<xref ref-type="bibr" rid="b95-ijms-10-01314">95</xref>] and GAPDH from rabbit skeletal muscle [<xref ref-type="bibr" rid="b14-ijms-10-01314">14</xref>].</p>
<p>The light scattering intensity versus the hydrodynamic radius plots may be used for estimation of the hydrodynamic radius of the initial particles (<italic>R</italic><sub>h,0</sub>) participating in the aggregation process. As it is demonstrated in <xref ref-type="fig" rid="f15-ijms-10-01314">Figure 15</xref>, the <italic>R</italic><sub>h,0</sub> values measured for mAAT aggregation in the presence of α-crystallin at concentrations of 0.1, 0.15 and 0.2 mg/mL were practically identical. The average value of the <italic>R</italic><sub>h,0</sub> was found to be 17.7 ± 1.3 nm. It should be noted that this <italic>R</italic><sub>h,0</sub> value exceeds the <italic>R</italic><sub>h,0</sub> value for α-crystallin under non-aggregating conditions (<italic>R</italic><sub>h</sub> = 11.0 ± 0.1 nm) [<xref ref-type="bibr" rid="b121-ijms-10-01314">121</xref>]. The hydrodynamic radius of the start aggregates was found to be 79 ± 3 nm in the case of thermal aggregation of mAAT in the absence of α-crystallin. Thus drastic decrease in the size of the start aggregates takes place in the presence of α-crystallin. An analogous picture was observed when studying the effect of α-crystallin on thermal aggregation of β<sub>L</sub>-crystallin [<xref ref-type="bibr" rid="b95-ijms-10-01314">95</xref>], GAPDH [<xref ref-type="bibr" rid="b14-ijms-10-01314">14</xref>] and Ph<italic>b</italic> [<xref ref-type="bibr" rid="b112-ijms-10-01314">112</xref>].</p>
<p>The reason of the splitting of the protein aggregate population into two components in the presence of α-crystallin may be the following. When the process of protein aggregation is studied in the absence of the chaperone, aggregation proceeds in the DLCA regime. Fulfillment of this regime means that each collision of the interacting particles results in their sticking. The high sticking probability is ensured by the high density of sticking sites (the sites of aggregation) on the surface of a starting aggregate. When aggregation of the protein substrate proceeds in the presence of α-crystallin, the starting aggregates containing incorporated α-crystallin are formed. Such starting aggregates are characterized by a lower density of the aggregation sites on the aggregate surface. As a result, the sticking probability for such colliding particles becomes lower than unity. Consider the sticking of particles with a limited number of the aggregation sites on the particle surface. The sticking of two particles results in disappearance of the aggregation sites in the contact region because of their mutual screening. Thus the growth of the protein aggregate may bring about formation of aggregates in which the number of the aggregation sites on the aggregate surface is greatly reduced. Such aggregates correspond to the component with lower values of <italic>R</italic><sub>h</sub> in the aggregate population (solid circles in <xref ref-type="fig" rid="f14-ijms-10-01314">Figure 14A</xref>–C at <italic>t</italic> &gt; <italic>t</italic><sub>crit</sub>). From this point of view the component with higher values of <italic>R</italic><sub>h</sub> (hollow circles in <xref ref-type="fig" rid="f14-ijms-10-01314">Figure 14A</xref>–C at <italic>t</italic> &gt; <italic>t</italic><sub>crit</sub>) corresponds to the component that retains relatively high density of the aggregation sites on the aggregate surface [<xref ref-type="bibr" rid="b95-ijms-10-01314">95</xref>].</p>
<p>The study of the effect of α-crystallin on thermal aggregation of proteins by DLS shows that the protective action of α-crystallin is due to diminution of the size of the start aggregates, transition of the aggregation process from the DLCA regime to the RLCA regime and, consequently, the decrease in sticking probability for the colliding particles. At rather high concentrations of α-crystallin, for example, at concentration of 0.4 mg/mL for the conditions used in the experiments shown in <xref ref-type="fig" rid="f14-ijms-10-01314">Figure 14</xref>, α-crystallin -unfolded protein complexes are formed, which are incapable of aggregating. The overall mechanism of the protective action of α-crystallin is represented in <xref ref-type="fig" rid="f16-ijms-10-01314">Figure 16</xref> [<xref ref-type="bibr" rid="b14-ijms-10-01314">14</xref>,<xref ref-type="bibr" rid="b95-ijms-10-01314">95</xref>].</p>
<p>Since the addition of α-crystallin results in the transition of the aggregation process for the protein substrate from the DLCA regime to the RLCA regime, one can expect that aggregation of α-crystallin itself will proceed in the RLCA regime. Actually Andreasi Bassi <italic>et al.</italic> [<xref ref-type="bibr" rid="b82-ijms-10-01314">82</xref>] showed that the dependence of the hydrodynamic radius on time for the protein aggregates formed in the course of aggregation of α-crystallin at 55 °C in the presence of 16 mM CaCl<sub>2</sub> (10 mM Tris-HCl buffer, pH 7.4) followed the exponential law.</p></sec>
<sec>
<label>4.</label>
<title>Effect of α-Crystallin on Thermal Stability of Proteins</title>
<p>In this review we have discussed the effect of α-crystallin on heat-induced aggregation of proteins. Since the initial stage of thermal aggregation of proteins is unfolding of the protein molecule, it is of interest to discuss the effect of α-crystallin on protein stability. The analysis of literature data shows that α-crystallin usually does not affect thermal stability of the proteins or, in some instances, stabilizes the proteins. For example, it was shown that α-crystallin interfered with heat-induced inactivation of pig heart citrate synthase, cytosolic malate dehydrogenase [<xref ref-type="bibr" rid="b122-ijms-10-01314">122</xref>], catalase [<xref ref-type="bibr" rid="b122-ijms-10-01314">122</xref>,<xref ref-type="bibr" rid="b123-ijms-10-01314">123</xref>], sorbitol dehydrogenase from sheep liver [<xref ref-type="bibr" rid="b124-ijms-10-01314">124</xref>], the restriction enzyme Nde I cleaving plasmid DNA [<xref ref-type="bibr" rid="b125-ijms-10-01314">125</xref>] and <italic>Chlamydia pneumoniae</italic> uracil DNA glycosylase [<xref ref-type="bibr" rid="b126-ijms-10-01314">126</xref>]. Rajaraman <italic>et al.</italic> [<xref ref-type="bibr" rid="b122-ijms-10-01314">122</xref>] have concluded that interaction of α-crystallin with early unfolded protein intermediates reduces the partitioning into aggregation-prone intermediates.</p>
<p>It is surprising that in some cases the decrease of the protein stability in the presence of α-crystallin is observed. Khanova <italic>et al.</italic> [<xref ref-type="bibr" rid="b121-ijms-10-01314">121</xref>] have studied the effect of α-crystallin on thermal stability of GAPDH using DSC (<xref ref-type="fig" rid="f17-ijms-10-01314">Figure 17</xref>). Thermal unfolding of GAPDH (0.4 mg/mL) is characterized by sharp thermal transition with a maximum at 61.6 °C (curve 1). In the presence of α-crystallin the shift of the maximum position (<italic>T</italic><sub>max</sub>) towards lower temperatures is observed. The shift is dependent on concentration of α-crystallin. When concentration of α-crystallin is 0.4 mg/mL the value of <italic>T</italic><sub>max</sub> decreases to 58.0 °C. These data indicate that stability of GAPDH is markedly reduced in the presence of α-crystallin. The displacement of the maximum position on the DSC profiles of GAPDH towards lower temperatures in the presence of α-crystallin suggests that α-crystallin interacts with the heating-induced intermediates of GAPDH unfolding. The products of heat-induced dissociation of the tetrameric form of GAPDH, namely the dimeric and monomeric forms, may play a role of such unfolding intermediates [<xref ref-type="bibr" rid="b94-ijms-10-01314">94</xref>]. It should also be noted that α-crystallin accelerates thermal inactivation of GAPDH at 45 °C (K.A. Markossian, unpublished data). The analogous picture has been observed, when studying the effect of α-crystallin on thermal inactivation and denaturation of mAAT [<xref ref-type="bibr" rid="b127-ijms-10-01314">127</xref>].</p>
<p>The kinetics of thermal inactivation of mAAT (0.1 mg/mL) at 65 °C are shown in <xref ref-type="fig" rid="f18-ijms-10-01314">Figure 18</xref>. This Figure demonstrates the time-course of the decline of the enzymatic activity of mAAT. The time of half-conversion (<italic>t</italic><sub>0.5</sub>) was found to be 32.7 ± 0.4 min (curve 1). The addition of α-crystallin results in acceleration of the inactivation process. When the concentration of α-crystallin is equal to 0.05 mg/mL, the <italic>t</italic><sub>0.5</sub> value decreases to 18.0 ± 0.6 min (curve 2). At the α-crystallin concentration of 0.1 mg/mL the <italic>t</italic><sub>0.5</sub> value was found to be 6.3 ± 0.3 min (curve 3).</p>
<p>The effect of α-crystallin on the thermostability of mAAT characterized by DSC is shown in <xref ref-type="fig" rid="f19-ijms-10-01314">Figure 19</xref> [<xref ref-type="bibr" rid="b127-ijms-10-01314">127</xref>]. The DSC profile for mAAT (1 mg/mL) has a maximum (<italic>T</italic><sub>max</sub>) of 72.4 °C (curve 1). The position of a maximum of the DSC profile for α-crystallin (1 mg/mL) corresponds to 63.7 °C (curve 2). The complex shape of the DSC profile for the mixture of mAAT and α-crystallin (curve 3) is due to non-homogeneity of the sample. It is evident that the shoulder at 63.7 °C corresponds to α-crystallin. The <italic>T</italic><sub>max</sub> value for the DSC profile under discussion was found to be 70.9 °C. One can assume that such a decrease in the <italic>T</italic><sub>max</sub> value is indicative of the reduced stability of mAAT in the presence of α-crystallin. It should be noted that destabilizing effect of α-crystallin has also been demonstrated for <italic>Phb</italic> [<xref ref-type="bibr" rid="b97-ijms-10-01314">97</xref>].</p>
<p><xref ref-type="fig" rid="f20-ijms-10-01314">Scheme 1</xref> below may serve to explain the effect of α-crystallin on thermal denaturation of a protein substrate. This scheme is a modification of the schematic diagram put forward by Rajaraman <italic>et al.</italic> [<xref ref-type="bibr" rid="b122-ijms-10-01314">122</xref>]. In <xref ref-type="fig" rid="f20-ijms-10-01314">scheme 1</xref> N is the native form of a protein, I<sub>1</sub> is the early unfolding intermediate and I<italic><sub>n</sub></italic> is the late aggregation-prone intermediate. I<sub>1</sub> ·C and I<italic><sub>n</sub></italic> ·C are, respectively, intermediates I<sub>1</sub> and I<italic><sub>n</sub></italic> complexed with α-crystallin. It is assumed that the initial stages of protein unfolding and complexion of α-crystallin with an early unfolding intermediate I<sub>1</sub> are reversible. Complexation of α-crystallin with the early unfolding intermediate may explain the influence of α-crystallin on denaturation of a protein substrate. One can expect that intermediate I<sub>1</sub>, which is formed as a result of partial unfolding of the native protein molecule, possesses a lower thermostability than the native protein. Protein-protein interactions usually lead to stabilization of the resulting complex. Therefore, one can expect that I<sub>1</sub> ·C complex is more stable than the I<sub>1</sub> form. The resulting stability of I<sub>1</sub> ·C complex may exceed the stability of the native protein form N. In this case α-crystallin decreases the rate of denaturation of the protein substrate (or the rate of inactivation if a protein substrate is an enzyme). However if the decrease in the stability during transition from state N to state I<sub>1</sub> is sufficiently significant, the resulting stability of the I<sub>1</sub> ·C complex may be found to be lower than that for the native molecule. In this case α-crystallin will cause destabilization of a protein substrate or, respectively, acceleration of inactivation of an enzyme used as a protein substrate. Thus, <xref ref-type="fig" rid="f20-ijms-10-01314">Scheme 1</xref> may explain either stabilizing or destabilizing action of α-crystallin, when studying denaturation of a protein substrate (or inactivation of an enzyme).</p></sec>
<sec sec-type="conclusions">
<label>5.</label>
<title>Conclusions</title>
<p>One of the functions of molecular chaperones is binding of proteins in unfolded state, which are formed in the course of folding of newly synthesized polypeptide chains or as a result of unfolding of the native proteins under stress conditions. Owing to complexation of unfolded proteins with chaperones, aggregation of proteins in unfolded state is suppressed. The comparative analysis of the anti-aggregation effect of chaperones of different classes is one of the important tasks of the modern biochemistry of chaperones.</p>
<p>An understanding of the mechanism of the anti-aggregation effect of chaperones needs a clarification of the mechanism of protein aggregation. As the DLS studies have shown, the first stage of heat-induced aggregation of proteins is the stage of formation of the starting aggregates. Further growth of the aggregates proceeds as a result of sticking of the starting aggregates and aggregates of higher order. It is evident that the starting aggregates formed in the course of aggregation, resulting in formation of amorphous aggregates, are similar to protofibrils formed in the course of assembly of fibrils.</p>
<p>The anti-aggregation effect of α-crystallin, one of representatives of the family of small heat-shock proteins, is due to diminution of the size of the starting aggregates and decrease in the sticking probability for the colliding particles. A different model may be applicable to chaperones of other classes. For example, chaperonin GroEL, a representative of Hsp60, does not affect the size of the start aggregates, but similarly to α-crystallin, transfers the aggregation process from the diffusion-limited regime to the RLCA regime (K.A. Markossian, unpublished data).</p>
<p>It is significant that the analysis of the dependence of the protein aggregate hydrodynamic radius on time allows revealing proteins that possess their own chaperone-like activity. For example, Markossian <italic>et al.</italic> [<xref ref-type="bibr" rid="b128-ijms-10-01314">128</xref>] observed that the dependences of hydrodynamic radius on time for thermal aggregation of yeast alcohol dehydrogenase I (ADH) followed the exponential law. Based on this fact, the authors assumed that ADH might reveal chaperone-like activity. Actually the capability of suppressing aggregation of the protein substrate by ADH was demonstrated in the test-system based on aggregation of UV-irradiated β<sub>L</sub>-crystallin from bovine eye lens [<xref ref-type="bibr" rid="b128-ijms-10-01314">128</xref>]. Thus some proteins with well-known biological functions (for example, enzymes) may act as chaperones, enhancing the total chaperone potential of the cell and providing for suppression of unfolded protein aggregation.</p></sec></body>
<back>
<ack>
<p>This study was funded by the Russian Foundation for Basic Research (grant 08-04-00666-a) and the Program “Molecular and Cell Biology” of the Presidium of the Russian Academy of Sciences.</p></ack>
<ref-list>
<title>References</title>
<ref id="b1-ijms-10-01314"><label>1.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Horwitz</surname><given-names>J</given-names></name></person-group><article-title>Alpha-crystallin</article-title><source>Exp. Eye Res</source><year>2003</year><volume>76</volume><fpage>145</fpage><lpage>153</lpage><pub-id pub-id-type="doi">10.1016/S0014-4835(02)00278-6</pub-id><pub-id pub-id-type="pmid">12565801</pub-id></citation></ref>
<ref id="b2-ijms-10-01314"><label>2.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Horwitz</surname><given-names>J</given-names></name></person-group><article-title>Alpha-crystallin can function as a molecular chaperone</article-title><source>Proc. Natl. Acad. Sci. USA</source><year>1992</year><volume>89</volume><fpage>10449</fpage><lpage>10453</lpage><pub-id pub-id-type="doi">10.1073/pnas.89.21.10449</pub-id><pub-id pub-id-type="pmid">1438232</pub-id></citation></ref>
<ref id="b3-ijms-10-01314"><label>3.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Carver</surname><given-names>JA</given-names></name><name><surname>Aquilina</surname><given-names>JA</given-names></name><name><surname>Cooper</surname><given-names>PG</given-names></name><name><surname>Williams</surname><given-names>GA</given-names></name><name><surname>Truscott</surname><given-names>RJ</given-names></name></person-group><article-title>Alpha-crystallin: molecular chaperone and protein surfactant</article-title><source>Biochim. Biophys. Acta</source><year>1994</year><volume>1204</volume><fpage>195</fpage><lpage>206</lpage><pub-id pub-id-type="doi">10.1016/0167-4838(94)90009-4</pub-id><pub-id pub-id-type="pmid">8142460</pub-id></citation></ref>
<ref id="b4-ijms-10-01314"><label>4.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Boyle</surname><given-names>D</given-names></name><name><surname>Takemoto</surname><given-names>L</given-names></name></person-group><article-title>Characterization of the alpha-gamma and alpha-beta complex: evidence for an in vivo functional role of alpha-crystallin as a molecular chaperone</article-title><source>Exp. Eye Res</source><year>1994</year><volume>58</volume><fpage>9</fpage><lpage>15</lpage><pub-id pub-id-type="doi">10.1006/exer.1994.1190</pub-id><pub-id pub-id-type="pmid">8157104</pub-id></citation></ref>
<ref id="b5-ijms-10-01314"><label>5.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Bloemendal</surname><given-names>H</given-names></name><name><surname>de Jong</surname><given-names>W</given-names></name><name><surname>Jaenicke</surname><given-names>R</given-names></name><name><surname>Lubsen</surname><given-names>NH</given-names></name><name><surname>Slingsby</surname><given-names>C</given-names></name><name><surname>Tardieu</surname><given-names>A</given-names></name></person-group><article-title>Ageing and vision: structure, stability and function of lens crystallins</article-title><source>Prog. Biophys. Mol. Biol</source><year>2004</year><volume>86</volume><fpage>407</fpage><lpage>485</lpage><pub-id pub-id-type="doi">10.1016/j.pbiomolbio.2003.11.012</pub-id><pub-id pub-id-type="pmid">15302206</pub-id></citation></ref>
<ref id="b6-ijms-10-01314"><label>6.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Evans</surname><given-names>P</given-names></name><name><surname>Slingsby</surname><given-names>C</given-names></name><name><surname>Wallace</surname><given-names>BA</given-names></name></person-group><article-title>Association of partially folded lens betaB2-crystallins with the alpha-crystallin molecular chaperone</article-title><source>Biochem. J</source><year>2008</year><volume>409</volume><fpage>691</fpage><lpage>699</lpage><pub-id pub-id-type="doi">10.1042/BJ20070993</pub-id><pub-id pub-id-type="pmid">17937660</pub-id></citation></ref>
<ref id="b7-ijms-10-01314"><label>7.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Iwaki</surname><given-names>T</given-names></name><name><surname>Kume-Iwaki</surname><given-names>A</given-names></name><name><surname>Goldman</surname><given-names>JE</given-names></name></person-group><article-title>Cellular distribution of alpha B-crystallin in non-lenticular tissues</article-title><source>J. Histochem. Cytochem</source><year>1990</year><volume>38</volume><fpage>31</fpage><lpage>39</lpage><pub-id pub-id-type="doi">10.1177/38.1.2294148</pub-id><pub-id pub-id-type="pmid">2294148</pub-id></citation></ref>
<ref id="b8-ijms-10-01314"><label>8.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kato</surname><given-names>K</given-names></name><name><surname>Shinohara</surname><given-names>H</given-names></name><name><surname>Kurobe</surname><given-names>N</given-names></name><name><surname>Inaguma</surname><given-names>Y</given-names></name><name><surname>Shimizu</surname><given-names>K</given-names></name><name><surname>Ohshima</surname><given-names>K</given-names></name></person-group><article-title>Tissue distribution and developmental profiles of immunoreactive alpha B crystallin in the rat determined with a sensitive immunoassay system</article-title><source>Biochim. Biophys. Acta</source><year>1991</year><volume>1074</volume><fpage>201</fpage><lpage>208</lpage><pub-id pub-id-type="doi">10.1016/0304-4165(91)90062-L</pub-id><pub-id pub-id-type="pmid">2043672</pub-id></citation></ref>
<ref id="b9-ijms-10-01314"><label>9.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Srinivasan</surname><given-names>AN</given-names></name><name><surname>Nagineni</surname><given-names>CN</given-names></name><name><surname>Bhat</surname><given-names>SP</given-names></name></person-group><article-title>alpha A-crystallin is expressed in non-ocular tissues</article-title><source>J. Biol Chem</source><year>1992</year><volume>267</volume><fpage>23337</fpage><lpage>23341</lpage><pub-id pub-id-type="pmid">1429679</pub-id></citation></ref>
<ref id="b10-ijms-10-01314"><label>10.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Horwitz</surname><given-names>J</given-names></name></person-group><article-title>The function of alpha-crystallin in vision</article-title><source>Semin. Cell Dev. Biol</source><year>2000</year><volume>11</volume><fpage>53</fpage><lpage>60</lpage><pub-id pub-id-type="doi">10.1006/scdb.1999.0351</pub-id><pub-id pub-id-type="pmid">10736264</pub-id></citation></ref>
<ref id="b11-ijms-10-01314"><label>11.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Wang</surname><given-names>K</given-names></name><name><surname>Spector</surname><given-names>A</given-names></name></person-group><article-title>The chaperone activity of bovine alpha crystallin. Interaction with other lens crystallins in native and denatured states</article-title><source>J. Biol Chem</source><year>1994</year><volume>269</volume><fpage>13601</fpage><lpage>13608</lpage><pub-id pub-id-type="pmid">7909809</pub-id></citation></ref>
<ref id="b12-ijms-10-01314"><label>12.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Van Montfort</surname><given-names>R</given-names></name><name><surname>Slingsby</surname><given-names>C</given-names></name><name><surname>Vierling</surname><given-names>E</given-names></name></person-group><article-title>Structure and function of the small heat shock protein/alpha-crystallin family of molecular chaperones</article-title><source>Adv. Protein Chem</source><year>2001</year><volume>59</volume><fpage>105</fpage><lpage>156</lpage><pub-id pub-id-type="pmid">11868270</pub-id></citation></ref>
<ref id="b13-ijms-10-01314"><label>13.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Carver</surname><given-names>JA</given-names></name><name><surname>Lindner</surname><given-names>RA</given-names></name><name><surname>Lyon</surname><given-names>C</given-names></name><name><surname>Canet</surname><given-names>D</given-names></name><name><surname>Hernandez</surname><given-names>H</given-names></name><name><surname>Dobson</surname><given-names>CM</given-names></name><name><surname>Redfield</surname><given-names>C</given-names></name></person-group><article-title>The interaction of the molecular chaperone alpha-crystallin with unfolding alpha-lactalbumin: a structural and kinetic spectroscopic study</article-title><source>J. Mol Biol</source><year>2002</year><volume>318</volume><fpage>815</fpage><lpage>827</lpage><pub-id pub-id-type="doi">10.1016/S0022-2836(02)00144-4</pub-id><pub-id pub-id-type="pmid">12054825</pub-id></citation></ref>
<ref id="b14-ijms-10-01314"><label>14.</label><citation citation-type="book"><person-group person-group-type="author"><name><surname>Markossian</surname><given-names>KA</given-names></name><name><surname>Kurganov</surname><given-names>BI</given-names></name><name><surname>Levitsky</surname><given-names>DI</given-names></name><name><surname>Khanova</surname><given-names>HA</given-names></name><name><surname>Chebotareva</surname><given-names>NA</given-names></name><name><surname>Samoilov</surname><given-names>AM</given-names></name><name><surname>Eronina</surname><given-names>TB</given-names></name><name><surname>Fedurkina</surname><given-names>NV</given-names></name><name><surname>Mitskevich</surname><given-names>LG</given-names></name><name><surname>Merem’yanin</surname><given-names>AV</given-names></name><name><surname>Kleymenov</surname><given-names>SY</given-names></name><name><surname>Makeeva</surname><given-names>VF</given-names></name><name><surname>Muronets</surname><given-names>VI</given-names></name><name><surname>Naletova</surname><given-names>IN</given-names></name><name><surname>Shalova</surname><given-names>IN</given-names></name><name><surname>Asryants</surname><given-names>RA</given-names></name><name><surname>Schmalhausen</surname><given-names>EV</given-names></name><name><surname>Saso</surname><given-names>L</given-names></name><name><surname>Panyukov</surname><given-names>YV</given-names></name><name><surname>Dobrov</surname><given-names>EN</given-names></name><name><surname>Yudin</surname><given-names>IK</given-names></name><name><surname>Timofeeva</surname><given-names>AC</given-names></name><name><surname>Muranov</surname><given-names>KO</given-names></name><name><surname>Ostrovsky</surname><given-names>MA</given-names></name></person-group><article-title>Mechanisms of chaperone-like activity</article-title><source>Protein Folding: New Research</source><person-group person-group-type="editor"><name><surname>Obalinsky</surname><given-names>TR</given-names></name></person-group><publisher-name>Nova Science Publishers Inc</publisher-name><publisher-loc>New York</publisher-loc><year>2006</year><fpage>89</fpage><lpage>171</lpage></citation></ref>
<ref id="b15-ijms-10-01314"><label>15.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Rekas</surname><given-names>A</given-names></name><name><surname>Jankova</surname><given-names>L</given-names></name><name><surname>Thorn</surname><given-names>DC</given-names></name><name><surname>Cappai</surname><given-names>R</given-names></name><name><surname>Carver</surname><given-names>JA</given-names></name></person-group><article-title>Monitoring the prevention of amyloid fibril formation by alpha-crystallin. Temperature dependence and the nature of the aggregating species</article-title><source>FEBS J</source><year>2007</year><volume>274</volume><fpage>6290</fpage><lpage>6304</lpage><pub-id pub-id-type="doi">10.1111/j.1742-4658.2007.06144.x</pub-id><pub-id pub-id-type="pmid">18005258</pub-id></citation></ref>
<ref id="b16-ijms-10-01314"><label>16.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ecroyd</surname><given-names>H</given-names></name><name><surname>Carver</surname><given-names>JA</given-names></name></person-group><article-title>Crystallin proteins and amyloid fibrils</article-title><source>Cell. Mol. Life Sci</source><year>2009</year><volume>66</volume><fpage>62</fpage><lpage>81</lpage><pub-id pub-id-type="doi">10.1007/s00018-008-8327-4</pub-id><pub-id pub-id-type="pmid">18810322</pub-id></citation></ref>
<ref id="b17-ijms-10-01314"><label>17.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Pullara</surname><given-names>F</given-names></name><name><surname>Emanuele</surname><given-names>A</given-names></name></person-group><article-title>Early stages of beta2-microglobulin aggregation and the inhibiting action of alphaB-crystallin</article-title><source>Proteins</source><year>2008</year><volume>73</volume><fpage>1037</fpage><lpage>1046</lpage><pub-id pub-id-type="doi">10.1002/prot.22122</pub-id><pub-id pub-id-type="pmid">18543331</pub-id></citation></ref>
<ref id="b18-ijms-10-01314"><label>18.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Siezen</surname><given-names>RJ</given-names></name><name><surname>Bindels</surname><given-names>JG</given-names></name><name><surname>Hoenders</surname><given-names>HJ</given-names></name></person-group><article-title>The quaternary structure of bovine alpha-crystallin. Effects of variation in alkaline pH, ionic strength, temperature and calcium ion concentration</article-title><source>Eur. J. Biochem</source><year>1980</year><volume>111</volume><fpage>435</fpage><lpage>444</lpage><pub-id pub-id-type="doi">10.1111/j.1432-1033.1980.tb04958.x</pub-id><pub-id pub-id-type="pmid">7460906</pub-id></citation></ref>
<ref id="b19-ijms-10-01314"><label>19.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Koretz</surname><given-names>JF</given-names></name><name><surname>Augusteyn</surname><given-names>RC</given-names></name></person-group><article-title>Electron microscopy of native and reconstituted alpha crystallin aggregates</article-title><source>Curr. Eye Res</source><year>1988</year><volume>7</volume><fpage>25</fpage><lpage>30</lpage><pub-id pub-id-type="doi">10.3109/02713688809047016</pub-id><pub-id pub-id-type="pmid">3359802</pub-id></citation></ref>
<ref id="b20-ijms-10-01314"><label>20.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>van den Oetelaar</surname><given-names>PJ</given-names></name><name><surname>van Someren</surname><given-names>PF</given-names></name><name><surname>Thomson</surname><given-names>JA</given-names></name><name><surname>Siezen</surname><given-names>RJ</given-names></name><name><surname>Hoenders</surname><given-names>HJ</given-names></name></person-group><article-title>A dynamic quaternary structure of bovine alpha-crystallin as indicated from intermolecular exchange of subunits</article-title><source>Biochemistry</source><year>1990</year><volume>29</volume><fpage>3488</fpage><lpage>3493</lpage><pub-id pub-id-type="doi">10.1021/bi00466a010</pub-id><pub-id pub-id-type="pmid">2354148</pub-id></citation></ref>
<ref id="b21-ijms-10-01314"><label>21.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Bova</surname><given-names>MP</given-names></name><name><surname>Ding</surname><given-names>LL</given-names></name><name><surname>Horwitz</surname><given-names>J</given-names></name><name><surname>Fung</surname><given-names>BK</given-names></name></person-group><article-title>Subunit exchange of alphaA-crystallin</article-title><source>J. Biol Chem</source><year>1997</year><volume>272</volume><fpage>29511</fpage><lpage>29517</lpage><pub-id pub-id-type="doi">10.1074/jbc.272.47.29511</pub-id><pub-id pub-id-type="pmid">9368012</pub-id></citation></ref>
<ref id="b22-ijms-10-01314"><label>22.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Vanhoudt</surname><given-names>J</given-names></name><name><surname>Aerts</surname><given-names>T</given-names></name><name><surname>Abgar</surname><given-names>S</given-names></name><name><surname>Clauwaert</surname><given-names>J</given-names></name></person-group><article-title>Quaternary structure of bovine alpha-crystallin: influence of temperature</article-title><source>Int. J. Biol Macromol</source><year>1998</year><volume>22</volume><fpage>229</fpage><lpage>237</lpage><pub-id pub-id-type="doi">10.1016/S0141-8130(98)00020-8</pub-id><pub-id pub-id-type="pmid">9650077</pub-id></citation></ref>
<ref id="b23-ijms-10-01314"><label>23.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Aquilina</surname><given-names>JA</given-names></name><name><surname>Benesch</surname><given-names>JL</given-names></name><name><surname>Bateman</surname><given-names>OA</given-names></name><name><surname>Slingsby</surname><given-names>C</given-names></name><name><surname>Robinson</surname><given-names>CV</given-names></name></person-group><article-title>Polydispersity of a mammalian chaperone: mass spectrometry reveals the population of oligomers in alpha B-crystallin</article-title><source>Proc. Natl. Acad. Sci. USA</source><year>2003</year><volume>100</volume><fpage>10611</fpage><lpage>10612</lpage><pub-id pub-id-type="doi">10.1073/pnas.1932958100</pub-id><pub-id pub-id-type="pmid">12947045</pub-id></citation></ref>
<ref id="b24-ijms-10-01314"><label>24.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Thomson</surname><given-names>JA</given-names></name><name><surname>Augusteyn</surname><given-names>RC</given-names></name></person-group><article-title>α<sub>m</sub>-Crystallin: the native form of the protein?</article-title><source>Exp. Eye Res</source><year>1983</year><volume>37</volume><fpage>367</fpage><lpage>377</lpage><pub-id pub-id-type="doi">10.1016/0014-4835(83)90173-2</pub-id><pub-id pub-id-type="pmid">6641820</pub-id></citation></ref>
<ref id="b25-ijms-10-01314"><label>25.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Wang</surname><given-names>XW</given-names></name><name><surname>Bettelheim</surname><given-names>FA</given-names></name></person-group><article-title>Second virial coefficient of alpha-crystallin</article-title><source>Proteins</source><year>1989</year><volume>5</volume><fpage>166</fpage><lpage>169</lpage><pub-id pub-id-type="doi">10.1002/prot.340050211</pub-id><pub-id pub-id-type="pmid">2748579</pub-id></citation></ref>
<ref id="b26-ijms-10-01314"><label>26.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Vanhoudt</surname><given-names>J</given-names></name><name><surname>Abgar</surname><given-names>S</given-names></name><name><surname>Aerts</surname><given-names>T</given-names></name><name><surname>Clauwaert</surname><given-names>J</given-names></name></person-group><article-title>Native quaternary structure of bovine alpha-crystallin</article-title><source>Biochemistry</source><year>2000</year><volume>39</volume><fpage>4483</fpage><lpage>4492</lpage><pub-id pub-id-type="doi">10.1021/bi990386u</pub-id><pub-id pub-id-type="pmid">10757997</pub-id></citation></ref>
<ref id="b27-ijms-10-01314"><label>27.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Abgar</surname><given-names>S</given-names></name><name><surname>Backmann</surname><given-names>J</given-names></name><name><surname>Aerts</surname><given-names>T</given-names></name><name><surname>Vanhoudt</surname><given-names>J</given-names></name><name><surname>Clauwaert</surname><given-names>J</given-names></name></person-group><article-title>The structural differences between bovine lens alphaA- and alphaB-crystallin</article-title><source>Eur. J. Biochem</source><year>2000</year><volume>267</volume><fpage>5916</fpage><lpage>5925</lpage><pub-id pub-id-type="pmid">10998051</pub-id></citation></ref>
<ref id="b28-ijms-10-01314"><label>28.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Putilina</surname><given-names>T</given-names></name><name><surname>Skouri-Panet</surname><given-names>F</given-names></name><name><surname>Prat</surname><given-names>K</given-names></name><name><surname>Lubsen</surname><given-names>NH</given-names></name><name><surname>Tardieu</surname><given-names>A</given-names></name></person-group><article-title>Subunit exchange demonstrates a differential chaperone activity of calf alpha-crystallin toward beta LOW- and individual gamma-crystallins</article-title><source>J. Biol. Chem</source><year>2003</year><volume>278</volume><fpage>13747</fpage><lpage>56</lpage><pub-id pub-id-type="doi">10.1074/jbc.M208157200</pub-id><pub-id pub-id-type="pmid">12562766</pub-id></citation></ref>
<ref id="b29-ijms-10-01314"><label>29.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Raman</surname><given-names>B</given-names></name><name><surname>Rao</surname><given-names>CM</given-names></name></person-group><article-title>Chaperone-like activity and quaternary structure of alpha-crystallin</article-title><source>J. Biol. Chem</source><year>1994</year><volume>269</volume><fpage>27264</fpage><lpage>27268</lpage><pub-id pub-id-type="pmid">7961635</pub-id></citation></ref>
<ref id="b30-ijms-10-01314"><label>30.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Das</surname><given-names>BK</given-names></name><name><surname>Liang</surname><given-names>JJ</given-names></name><name><surname>Chakrabarti</surname><given-names>B</given-names></name></person-group><article-title>Heat-induced conformational change and increased chaperone activity of lens alpha-crystallin</article-title><source>Curr. Eye Res</source><year>1997</year><volume>16</volume><fpage>303</fpage><lpage>309</lpage><pub-id pub-id-type="doi">10.1076/ceyr.16.4.303.10691</pub-id><pub-id pub-id-type="pmid">9134318</pub-id></citation></ref>
<ref id="b31-ijms-10-01314"><label>31.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Aquilina</surname><given-names>JA</given-names></name><name><surname>Benesch</surname><given-names>JL</given-names></name><name><surname>Ding</surname><given-names>LL</given-names></name><name><surname>Yaron</surname><given-names>O</given-names></name><name><surname>Horwitz</surname><given-names>J</given-names></name><name><surname>Robinson</surname><given-names>CV</given-names></name></person-group><article-title>Subunit exchange of polydisperse proteins: mass spectrometry reveals consequences of alphaA-crystallin truncation</article-title><source>J. Biol. Chem</source><year>2005</year><volume>280</volume><fpage>14485</fpage><lpage>14491</lpage><pub-id pub-id-type="doi">10.1074/jbc.M500135200</pub-id><pub-id pub-id-type="pmid">15701626</pub-id></citation></ref>
<ref id="b32-ijms-10-01314"><label>32.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Meehan</surname><given-names>S</given-names></name><name><surname>Berry</surname><given-names>Y</given-names></name><name><surname>Luisi</surname><given-names>B</given-names></name><name><surname>Dobson</surname><given-names>CM</given-names></name><name><surname>Carver</surname><given-names>JA</given-names></name><name><surname>MacPhee</surname><given-names>CE</given-names></name></person-group><article-title>Amyloid fibril formation by lens crystallin proteins and its implications for cataract formation</article-title><source>J. Biol. Chem</source><year>2004</year><volume>279</volume><fpage>3413</fpage><lpage>3419</lpage><pub-id pub-id-type="pmid">14615485</pub-id></citation></ref>
<ref id="b33-ijms-10-01314"><label>33.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Meehan</surname><given-names>S</given-names></name><name><surname>Knowles</surname><given-names>TP</given-names></name><name><surname>Baldwin</surname><given-names>AJ</given-names></name><name><surname>Smith</surname><given-names>JF</given-names></name><name><surname>Squires</surname><given-names>AM</given-names></name><name><surname>Clements</surname><given-names>P</given-names></name><name><surname>Treweek</surname><given-names>TM</given-names></name><name><surname>Ecroyd</surname><given-names>H</given-names></name><name><surname>Tartaglia</surname><given-names>GG</given-names></name><name><surname>Vendruscolo</surname><given-names>M</given-names></name><name><surname>Macphee</surname><given-names>CE</given-names></name><name><surname>Dobson</surname><given-names>CM</given-names></name><name><surname>Carver</surname><given-names>JA</given-names></name></person-group><article-title>Characterisation of amyloid fibril formation by small heat-shock chaperone proteins human alphaA-, alphaB- and R120G alphaB-crystallins</article-title><source>J. Mol. Biol</source><year>2007</year><volume>372</volume><fpage>470</fpage><lpage>484</lpage><pub-id pub-id-type="doi">10.1016/j.jmb.2007.06.060</pub-id><pub-id pub-id-type="pmid">17662998</pub-id></citation></ref>
<ref id="b34-ijms-10-01314"><label>34.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Raman</surname><given-names>B</given-names></name><name><surname>Rao</surname><given-names>CM</given-names></name></person-group><article-title>Chaperone-like activity and temperature-induced structural changes of alpha-crystallin</article-title><source>J. Biol. Chem</source><year>1997</year><volume>272</volume><fpage>23559</fpage><lpage>23564</lpage><pub-id pub-id-type="doi">10.1074/jbc.272.38.23559</pub-id><pub-id pub-id-type="pmid">9295293</pub-id></citation></ref>
<ref id="b35-ijms-10-01314"><label>35.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Reddy</surname><given-names>GB</given-names></name><name><surname>Das</surname><given-names>KP</given-names></name><name><surname>Petrash</surname><given-names>JM</given-names></name><name><surname>Surewicz</surname><given-names>WK</given-names></name></person-group><article-title>Temperature-dependent chaperone activity and structural properties of human alphaA- and alphaB-crystallins</article-title><source>J. Biol. Chem</source><year>2000</year><volume>275</volume><fpage>4565</fpage><lpage>4570</lpage><pub-id pub-id-type="doi">10.1074/jbc.275.7.4565</pub-id><pub-id pub-id-type="pmid">10671481</pub-id></citation></ref>
<ref id="b36-ijms-10-01314"><label>36.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Devlin</surname><given-names>GL</given-names></name><name><surname>Carver</surname><given-names>JA</given-names></name><name><surname>Bottomley</surname><given-names>SP</given-names></name></person-group><article-title>The selective inhibition of serpin aggregation by the molecular chaperone, alpha-crystallin, indicates a nucleation-dependent specificity</article-title><source>J. Biol. Chem</source><year>2003</year><volume>278</volume><fpage>48644</fpage><lpage>48650</lpage><pub-id pub-id-type="doi">10.1074/jbc.M308376200</pub-id><pub-id pub-id-type="pmid">14500715</pub-id></citation></ref>
<ref id="b37-ijms-10-01314"><label>37.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Sharma</surname><given-names>KK</given-names></name><name><surname>Kaur</surname><given-names>H</given-names></name><name><surname>Kumar</surname><given-names>GS</given-names></name><name><surname>Kester</surname><given-names>K</given-names></name></person-group><article-title>Interaction of 1,1′-bi(4-anilino)naphthalene-5,5′-disulfonic acid with alpha-crystallin</article-title><source>J. Biol. Chem</source><year>1998</year><volume>273</volume><fpage>8965</fpage><lpage>8970</lpage><pub-id pub-id-type="doi">10.1074/jbc.273.15.8965</pub-id><pub-id pub-id-type="pmid">9535881</pub-id></citation></ref>
<ref id="b38-ijms-10-01314"><label>38.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kumar</surname><given-names>MS</given-names></name><name><surname>Kapoor</surname><given-names>M</given-names></name><name><surname>Sinha</surname><given-names>S</given-names></name><name><surname>Reddy</surname><given-names>GB</given-names></name></person-group><article-title>Insights into hydrophobicity and the chaperone-like function of alphaA- and alphaB-crystallins: an isothermal titration calorimetric study</article-title><source>J. Biol. Chem</source><year>2005</year><volume>280</volume><fpage>21726</fpage><lpage>21730</lpage><pub-id pub-id-type="doi">10.1074/jbc.M500405200</pub-id><pub-id pub-id-type="pmid">15817465</pub-id></citation></ref>
<ref id="b39-ijms-10-01314"><label>39.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Lindner</surname><given-names>RA</given-names></name><name><surname>Treweek</surname><given-names>TM</given-names></name><name><surname>Carver</surname><given-names>JA</given-names></name></person-group><article-title>The molecular chaperone alpha-crystallin is in kinetic competition with aggregation to stabilize a monomeric molten-globule form of alpha-lactalbumin</article-title><source>Biochem. J</source><year>2001</year><volume>354</volume><fpage>79</fpage><lpage>87</lpage><pub-id pub-id-type="doi">10.1042/0264-6021:3540079</pub-id><pub-id pub-id-type="pmid">11171082</pub-id></citation></ref>
<ref id="b40-ijms-10-01314"><label>40.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Abgar</surname><given-names>S</given-names></name><name><surname>Vanhoudt</surname><given-names>J</given-names></name><name><surname>Aerts</surname><given-names>T</given-names></name><name><surname>Clauwaert</surname><given-names>J</given-names></name></person-group><article-title>Study of the chaperoning mechanism of bovine lens alpha-crystallin, a member of the alpha-small heat shock superfamily</article-title><source>Biophys. J</source><year>2001</year><volume>80</volume><fpage>1986</fpage><lpage>1995</lpage><pub-id pub-id-type="doi">10.1016/S0006-3495(01)76168-1</pub-id><pub-id pub-id-type="pmid">11259311</pub-id></citation></ref>
<ref id="b41-ijms-10-01314"><label>41.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Stege</surname><given-names>GJ</given-names></name><name><surname>Renkawek</surname><given-names>K</given-names></name><name><surname>Overkamp</surname><given-names>PS</given-names></name><name><surname>Verschuure</surname><given-names>P</given-names></name><name><surname>van Rijk</surname><given-names>AF</given-names></name><name><surname>Reijnen-Aalbers</surname><given-names>A</given-names></name><name><surname>Boelens</surname><given-names>WC</given-names></name><name><surname>Bosman</surname><given-names>GJ</given-names></name><name><surname>de Jong</surname><given-names>WW</given-names></name></person-group><article-title>The molecular chaperone alphaB-crystallin enhances amyloid beta neurotoxicity</article-title><source>Biochem. Biophys. Res. Commun</source><year>1999</year><volume>262</volume><fpage>152</fpage><lpage>156</lpage><pub-id pub-id-type="doi">10.1006/bbrc.1999.1167</pub-id><pub-id pub-id-type="pmid">10448084</pub-id></citation></ref>
<ref id="b42-ijms-10-01314"><label>42.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Hatters</surname><given-names>DM</given-names></name><name><surname>Lindner</surname><given-names>RA</given-names></name><name><surname>Carver</surname><given-names>JA</given-names></name><name><surname>Howlett</surname><given-names>GJ</given-names></name></person-group><article-title>The molecular chaperone, alpha-crystallin, inhibits amyloid formation by apolipoprotein C-II</article-title><source>J. Biol. Chem</source><year>2001</year><volume>276</volume><fpage>33755</fpage><lpage>33761</lpage><pub-id pub-id-type="doi">10.1074/jbc.M105285200</pub-id><pub-id pub-id-type="pmid">11447233</pub-id></citation></ref>
<ref id="b43-ijms-10-01314"><label>43.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Raman</surname><given-names>B</given-names></name><name><surname>Ban</surname><given-names>T</given-names></name><name><surname>Sakai</surname><given-names>M</given-names></name><name><surname>Pasta</surname><given-names>SY</given-names></name><name><surname>Ramakrishna</surname><given-names>T</given-names></name><name><surname>Naiki</surname><given-names>H</given-names></name><name><surname>Goto</surname><given-names>Y</given-names></name><name><surname>Rao</surname><given-names>CM</given-names></name></person-group><article-title>AlphaB-crystallin, a small heat-shock protein, prevents the amyloid fibril growth of an amyloid beta-peptide and beta2-microglobulin</article-title><source>Biochem. J</source><year>2005</year><volume>392</volume><fpage>573</fpage><lpage>581</lpage><pub-id pub-id-type="doi">10.1042/BJ20050339</pub-id><pub-id pub-id-type="pmid">16053447</pub-id></citation></ref>
<ref id="b44-ijms-10-01314"><label>44.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>London</surname><given-names>J</given-names></name><name><surname>Skrzynia</surname><given-names>C</given-names></name><name><surname>Goldberg</surname><given-names>ME</given-names></name></person-group><article-title>Renaturation of Escherichia coli tryptophanase after exposure to 8 M urea. Evidence for the existence of nucleation centers</article-title><source>Eur. J. Biochem</source><year>1974</year><volume>47</volume><fpage>409</fpage><lpage>415</lpage><pub-id pub-id-type="doi">10.1111/j.1432-1033.1974.tb03707.x</pub-id><pub-id pub-id-type="pmid">4607014</pub-id></citation></ref>
<ref id="b45-ijms-10-01314"><label>45.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Fink</surname><given-names>AL</given-names></name></person-group><article-title>Protein aggregation: folding aggregates, inclusion bodies and amyloid</article-title><source>Fold. Des</source><year>1998</year><volume>3</volume><fpage>R9</fpage><lpage>23</lpage><pub-id pub-id-type="doi">10.1016/S1359-0278(98)00002-9</pub-id><pub-id pub-id-type="pmid">9502314</pub-id></citation></ref>
<ref id="b46-ijms-10-01314"><label>46.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Dobson</surname><given-names>CM</given-names></name></person-group><article-title>Protein misfolding, evolution and disease</article-title><source>Trends Biochem. Sci</source><year>1999</year><volume>24</volume><fpage>329</fpage><lpage>332</lpage><pub-id pub-id-type="doi">10.1016/S0968-0004(99)01445-0</pub-id><pub-id pub-id-type="pmid">10470028</pub-id></citation></ref>
<ref id="b47-ijms-10-01314"><label>47.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Wetzel</surname><given-names>R</given-names></name></person-group><article-title>Mutations and off-pathway aggregation of proteins</article-title><source>Trends Biotechnol</source><year>1994</year><volume>12</volume><fpage>193</fpage><lpage>198</lpage><pub-id pub-id-type="doi">10.1016/0167-7799(94)90082-5</pub-id><pub-id pub-id-type="pmid">7764903</pub-id></citation></ref>
<ref id="b48-ijms-10-01314"><label>48.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Jaenicke</surname><given-names>R</given-names></name></person-group><article-title>Folding and association versus misfolding and aggregation of proteins</article-title><source>Philos. Trans. R. Soc. Lond. B Biol. Sci</source><year>1995</year><volume>348</volume><fpage>97</fpage><lpage>105</lpage><pub-id pub-id-type="doi">10.1098/rstb.1995.0050</pub-id><pub-id pub-id-type="pmid">7770492</pub-id></citation></ref>
<ref id="b49-ijms-10-01314"><label>49.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kopito</surname><given-names>RR</given-names></name></person-group><article-title>Aggresomes, inclusion bodies and protein aggregation</article-title><source>Trends Cell Biol</source><year>2000</year><volume>10</volume><fpage>524</fpage><lpage>530</lpage><pub-id pub-id-type="doi">10.1016/S0962-8924(00)01852-3</pub-id><pub-id pub-id-type="pmid">11121744</pub-id></citation></ref>
<ref id="b50-ijms-10-01314"><label>50.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Chiti</surname><given-names>F</given-names></name><name><surname>Stefani</surname><given-names>M</given-names></name><name><surname>Taddei</surname><given-names>N</given-names></name><name><surname>Ramponi</surname><given-names>G</given-names></name><name><surname>Dobson</surname><given-names>CM</given-names></name></person-group><article-title>Rationalization of the effects of mutations on peptide and protein aggregation rates</article-title><source>Nature</source><year>2003</year><volume>424</volume><fpage>805</fpage><lpage>808</lpage><pub-id pub-id-type="doi">10.1038/nature01891</pub-id><pub-id pub-id-type="pmid">12917692</pub-id></citation></ref>
<ref id="b51-ijms-10-01314"><label>51.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Alexandrescu</surname><given-names>AT</given-names></name></person-group><article-title>Amyloid accomplices and enforcers</article-title><source>Protein Sci</source><year>2005</year><volume>14</volume><fpage>1</fpage><lpage>12</lpage><pub-id pub-id-type="pmid">15576561</pub-id></citation></ref>
<ref id="b52-ijms-10-01314"><label>52.</label><citation citation-type="book"><person-group person-group-type="author"><name><surname>Murphy</surname><given-names>RM</given-names></name><name><surname>Lee</surname><given-names>CC</given-names></name></person-group><article-title>Laser light scattering as an indispensable tool for probing protein aggregation</article-title><source>Misbehaving Proteins: Protein (mis)Folding, Aggregation, and Stability</source><person-group person-group-type="editor"><name><surname>Murphy</surname><given-names>RM</given-names></name><name><surname>Tsai</surname><given-names>AM</given-names></name></person-group><publisher-name>Springer</publisher-name><publisher-loc>New York, USA</publisher-loc><year>2006</year><volume>VIII</volume><fpage>147</fpage><lpage>165</lpage></citation></ref>
<ref id="b53-ijms-10-01314"><label>53.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Wetzel</surname><given-names>R</given-names></name></person-group><article-title>Amyloid fibrils-common threads in the natural history of proteins</article-title><source>Acc. Chem. Res</source><year>2006</year><volume>39</volume><fpage>567</fpage><pub-id pub-id-type="doi">10.1021/ar0681934</pub-id><pub-id pub-id-type="pmid">16981671</pub-id></citation></ref>
<ref id="b54-ijms-10-01314"><label>54.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Stefani</surname><given-names>M</given-names></name></person-group><article-title>Protein folding and misfolding on surfaces</article-title><source>Int. J. Mol. Sci</source><year>2008</year><volume>9</volume><fpage>2515</fpage><lpage>2542</lpage><pub-id pub-id-type="doi">10.3390/ijms9122515</pub-id><pub-id pub-id-type="pmid">19330090</pub-id></citation></ref>
<ref id="b55-ijms-10-01314"><label>55.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Perutz</surname><given-names>MF</given-names></name></person-group><article-title>Amyloid fibrils. Mutations make enzyme polymerize</article-title><source>Nature</source><year>1997</year><volume>385</volume><fpage>773</fpage><lpage>775</lpage><pub-id pub-id-type="pmid">9039907</pub-id></citation></ref>
<ref id="b56-ijms-10-01314"><label>56.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Georgiou</surname><given-names>G</given-names></name><name><surname>Valax</surname><given-names>P</given-names></name></person-group><article-title>Expression of correctly folded proteins in <italic>Escherichia coli</italic></article-title><source>Curr. Opin. Biotechnol</source><year>1996</year><volume>7</volume><fpage>190</fpage><lpage>197</lpage><pub-id pub-id-type="doi">10.1016/S0958-1669(96)80012-7</pub-id><pub-id pub-id-type="pmid">8791338</pub-id></citation></ref>
<ref id="b57-ijms-10-01314"><label>57.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Villaverde</surname><given-names>A</given-names></name><name><surname>Carrio</surname><given-names>MM</given-names></name></person-group><article-title>Protein aggregation in recombinant bacteria: biological role of inclusion bodies</article-title><source>Biotechnol. Lett</source><year>2003</year><volume>25</volume><fpage>1385</fpage><lpage>1395</lpage><pub-id pub-id-type="doi">10.1023/A:1025024104862</pub-id><pub-id pub-id-type="pmid">14514038</pub-id></citation></ref>
<ref id="b58-ijms-10-01314"><label>58.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Markossian</surname><given-names>KA</given-names></name><name><surname>Kurganov</surname><given-names>BI</given-names></name></person-group><article-title>Protein folding, misfolding, and aggregation. Formation of inclusion bodies and aggresomes</article-title><source>Biochemistry (Mosc)</source><year>2004</year><volume>69</volume><fpage>971</fpage><lpage>84</lpage><pub-id pub-id-type="doi">10.1023/B:BIRY.0000043539.07961.4c</pub-id></citation></ref>
<ref id="b59-ijms-10-01314"><label>59.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Serio</surname><given-names>TR</given-names></name><name><surname>Cashikar</surname><given-names>AG</given-names></name><name><surname>Kowal</surname><given-names>AS</given-names></name><name><surname>Sawicki</surname><given-names>GJ</given-names></name><name><surname>Moslehi</surname><given-names>JJ</given-names></name><name><surname>Serpell</surname><given-names>L</given-names></name><name><surname>Arnsdorf</surname><given-names>MF</given-names></name><name><surname>Lindquist</surname><given-names>SL</given-names></name></person-group><article-title>Nucleated conformational conversion and the replication of conformational information by a prion determinant</article-title><source>Science</source><year>2000</year><volume>289</volume><fpage>1317</fpage><lpage>1321</lpage><pub-id pub-id-type="doi">10.1126/science.289.5483.1317</pub-id><pub-id pub-id-type="pmid">10958771</pub-id></citation></ref>
<ref id="b60-ijms-10-01314"><label>60.</label><citation citation-type="book"><person-group person-group-type="author"><name><surname>Guo</surname><given-names>J</given-names></name><name><surname>Hall</surname><given-names>CK</given-names></name><name><surname>Xu</surname><given-names>Y</given-names></name><name><surname>Wetzel</surname><given-names>R</given-names></name></person-group><article-title>Modeling protein aggregate assembly and structure</article-title><source>Biological and Medical Physics, Biomedical Engineering</source><person-group person-group-type="editor"><name><surname>Xu</surname><given-names>Y</given-names></name><name><surname>Xu</surname><given-names>D</given-names></name><name><surname>Liang</surname><given-names>J</given-names></name></person-group><publisher-name>Springer Science+Business Media, LLC</publisher-name><publisher-loc>New York, USA</publisher-loc><year>2007</year><volume>1</volume><fpage>279</fpage><lpage>317</lpage></citation></ref>
<ref id="b61-ijms-10-01314"><label>61.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Oosawa</surname><given-names>F</given-names></name><name><surname>Kasai</surname><given-names>M</given-names></name></person-group><article-title>A theory of linear and helical aggregations of macromolecules</article-title><source>J. Mol. Biol</source><year>1962</year><volume>4</volume><fpage>10</fpage><lpage>21</lpage><pub-id pub-id-type="doi">10.1016/S0022-2836(62)80112-0</pub-id><pub-id pub-id-type="pmid">14482095</pub-id></citation></ref>
<ref id="b62-ijms-10-01314"><label>62.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Speed</surname><given-names>MA</given-names></name><name><surname>King</surname><given-names>J</given-names></name><name><surname>Wang</surname><given-names>DI</given-names></name></person-group><article-title>Polymerization mechanism of polypeptide chain aggregation</article-title><source>Biotechnol. Bioeng</source><year>1997</year><volume>54</volume><fpage>333</fpage><lpage>343</lpage><pub-id pub-id-type="doi">10.1002/(SICI)1097-0290(19970520)54:4&lt;333::AID-BIT6&gt;3.0.CO;2-L</pub-id><pub-id pub-id-type="pmid">18634100</pub-id></citation></ref>
<ref id="b63-ijms-10-01314"><label>63.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kurganov</surname><given-names>BI</given-names></name><name><surname>Rafikova</surname><given-names>ER</given-names></name><name><surname>Dobrov</surname><given-names>EN</given-names></name></person-group><article-title>Kinetics of thermal aggregation of tobacco mosaic virus coat protein</article-title><source>Biochemistry (Mosc)</source><year>2002</year><volume>67</volume><fpage>525</fpage><lpage>533</lpage><pub-id pub-id-type="doi">10.1023/A:1015589926728</pub-id></citation></ref>
<ref id="b64-ijms-10-01314"><label>64.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kurganov</surname><given-names>BI</given-names></name></person-group><article-title>Estimation of the activity of molecular chaperones in test-systems based on suppression of protein aggregation</article-title><source>Usp Biol Khim (Mosc)</source><year>2002</year><volume>42</volume><fpage>89</fpage><lpage>138</lpage></citation></ref>
<ref id="b65-ijms-10-01314"><label>65.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kurganov</surname><given-names>BI</given-names></name></person-group><article-title>Kinetics of protein aggregation. Quantitative estimation of the chaperone-like activity in test-systems based on suppression of protein aggregation</article-title><source>Biochemistry (Mosc)</source><year>2002</year><volume>67</volume><fpage>409</fpage><lpage>422</lpage><pub-id pub-id-type="doi">10.1023/A:1015277805345</pub-id></citation></ref>
<ref id="b66-ijms-10-01314"><label>66.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Wang</surname><given-names>K</given-names></name><name><surname>Kurganov</surname><given-names>BI</given-names></name></person-group><article-title>Kinetics of heat- and acidification-induced aggregation of firefly luciferase</article-title><source>Biophys. Chem</source><year>2003</year><volume>106</volume><fpage>97</fpage><lpage>109</lpage><pub-id pub-id-type="doi">10.1016/S0301-4622(03)00134-0</pub-id><pub-id pub-id-type="pmid">14556900</pub-id></citation></ref>
<ref id="b67-ijms-10-01314"><label>67.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kodaka</surname><given-names>M</given-names></name></person-group><article-title>Requirements for generating sigmoidal time-course aggregation in nucleation-dependent polymerization model</article-title><source>Biophys. Chem</source><year>2004</year><volume>107</volume><fpage>243</fpage><lpage>253</lpage><pub-id pub-id-type="doi">10.1016/j.bpc.2003.09.013</pub-id><pub-id pub-id-type="pmid">14967239</pub-id></citation></ref>
<ref id="b68-ijms-10-01314"><label>68.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kodaka</surname><given-names>M</given-names></name></person-group><article-title>Interpretation of concentration-dependence in aggregation kinetics</article-title><source>Biophys. Chem</source><year>2004</year><volume>109</volume><fpage>325</fpage><lpage>332</lpage><pub-id pub-id-type="doi">10.1016/j.bpc.2003.12.003</pub-id><pub-id pub-id-type="pmid">15110949</pub-id></citation></ref>
<ref id="b69-ijms-10-01314"><label>69.</label><citation citation-type="book"><person-group person-group-type="author"><name><surname>Kurganov</surname><given-names>BI</given-names></name></person-group><article-title>Protein aggregation kinetics</article-title><source>Chemical and Biological Kinetics</source><person-group person-group-type="editor"><name><surname>Burlakova</surname><given-names>EB</given-names></name><name><surname>Varfolomeev</surname><given-names>SD</given-names></name></person-group><publisher-name>Koninklijke Brill NV</publisher-name><publisher-loc>The Netherlands, Leiden, Holand</publisher-loc><year>2005</year><volume>2</volume><fpage>251</fpage><lpage>279</lpage></citation></ref>
<ref id="b70-ijms-10-01314"><label>70.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ben-Zvi</surname><given-names>AP</given-names></name><name><surname>Goloubinoff</surname><given-names>P</given-names></name></person-group><article-title>Proteinaceous infectious behavior in non-pathogenic proteins is controlled by molecular chaperones</article-title><source>J. Biol. Chem</source><year>2002</year><volume>277</volume><fpage>49422</fpage><lpage>49427</lpage><pub-id pub-id-type="doi">10.1074/jbc.M209163200</pub-id><pub-id pub-id-type="pmid">12377766</pub-id></citation></ref>
<ref id="b71-ijms-10-01314"><label>71.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Jarrett</surname><given-names>JT</given-names></name><name><surname>Lansbury</surname><given-names>PT</given-names><suffix>Jr</suffix></name></person-group><article-title>Amyloid fibril formation requires a chemically discriminating nucleation event: studies of an amyloidogenic sequence from the bacterial protein OsmB</article-title><source>Biochemistry</source><year>1992</year><volume>31</volume><fpage>12345</fpage><lpage>12352</lpage><pub-id pub-id-type="doi">10.1021/bi00164a008</pub-id><pub-id pub-id-type="pmid">1463722</pub-id></citation></ref>
<ref id="b72-ijms-10-01314"><label>72.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Shen</surname><given-names>CL</given-names></name><name><surname>Scott</surname><given-names>GL</given-names></name><name><surname>Merchant</surname><given-names>F</given-names></name><name><surname>Murphy</surname><given-names>RM</given-names></name></person-group><article-title>Light scattering analysis of fibril growth from the amino-terminal fragment beta(1–28) of beta-amyloid peptide</article-title><source>Biophys. J</source><year>1993</year><volume>65</volume><fpage>2383</fpage><lpage>2395</lpage><pub-id pub-id-type="doi">10.1016/S0006-3495(93)81312-2</pub-id><pub-id pub-id-type="pmid">8312477</pub-id></citation></ref>
<ref id="b73-ijms-10-01314"><label>73.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Nielsen</surname><given-names>L</given-names></name><name><surname>Khurana</surname><given-names>R</given-names></name><name><surname>Coats</surname><given-names>A</given-names></name><name><surname>Frokjaer</surname><given-names>S</given-names></name><name><surname>Brange</surname><given-names>J</given-names></name><name><surname>Vyas</surname><given-names>S</given-names></name><name><surname>Uversky</surname><given-names>VN</given-names></name><name><surname>Fink</surname><given-names>AL</given-names></name></person-group><article-title>Effect of environmental factors on the kinetics of insulin fibril formation: elucidation of the molecular mechanism</article-title><source>Biochemistry</source><year>2001</year><volume>40</volume><fpage>6036</fpage><lpage>6046</lpage><pub-id pub-id-type="doi">10.1021/bi002555c</pub-id><pub-id pub-id-type="pmid">11352739</pub-id></citation></ref>
<ref id="b74-ijms-10-01314"><label>74.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Fezoui</surname><given-names>Y</given-names></name><name><surname>Teplow</surname><given-names>DB</given-names></name></person-group><article-title>Kinetic studies of amyloid beta-protein fibril assembly. Differential effects of alpha-helix stabilization</article-title><source>J. Biol. Chem</source><year>2002</year><volume>277</volume><fpage>36948</fpage><lpage>36954</lpage><pub-id pub-id-type="doi">10.1074/jbc.M204168200</pub-id><pub-id pub-id-type="pmid">12149256</pub-id></citation></ref>
<ref id="b75-ijms-10-01314"><label>75.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kentsis</surname><given-names>A</given-names></name><name><surname>Borden</surname><given-names>KL</given-names></name></person-group><article-title>Physical mechanisms and biological significance of supramolecular protein self-assembly</article-title><source>Curr. Protein Pept. Sci</source><year>2004</year><volume>5</volume><fpage>125</fpage><lpage>134</lpage><pub-id pub-id-type="doi">10.2174/1389203043486856</pub-id><pub-id pub-id-type="pmid">15078223</pub-id></citation></ref>
<ref id="b76-ijms-10-01314"><label>76.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Roberts</surname><given-names>CJ</given-names></name></person-group><article-title>Non-native protein aggregation kinetics</article-title><source>Biotechnol. Bioeng</source><year>2007</year><volume>98</volume><fpage>927</fpage><lpage>938</lpage><pub-id pub-id-type="doi">10.1002/bit.21627</pub-id><pub-id pub-id-type="pmid">17705294</pub-id></citation></ref>
<ref id="b77-ijms-10-01314"><label>77.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Morris</surname><given-names>AM</given-names></name><name><surname>Watzky</surname><given-names>MA</given-names></name><name><surname>Finke</surname><given-names>RG</given-names></name></person-group><article-title>Protein aggregation kinetics, mechanism, and curve-fitting: A review of the literature</article-title><source>Biochim. Biophys. Acta</source><year>2009</year><volume>1794</volume><fpage>375</fpage><lpage>397</lpage><pub-id pub-id-type="doi">10.1016/j.bbapap.2008.10.016</pub-id><pub-id pub-id-type="pmid">19071235</pub-id></citation></ref>
<ref id="b78-ijms-10-01314"><label>78.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Khurana</surname><given-names>R</given-names></name><name><surname>Gillespie</surname><given-names>JR</given-names></name><name><surname>Talapatra</surname><given-names>A</given-names></name><name><surname>Minert</surname><given-names>LJ</given-names></name><name><surname>Ionescu-Zanetti</surname><given-names>C</given-names></name><name><surname>Millett</surname><given-names>I</given-names></name><name><surname>Fink</surname><given-names>AL</given-names></name></person-group><article-title>Partially folded intermediates as critical precursors of light chain amyloid fibrils and amorphous aggregates</article-title><source>Biochemistry</source><year>2001</year><volume>40</volume><fpage>3525</fpage><lpage>3535</lpage><pub-id pub-id-type="doi">10.1021/bi001782b</pub-id><pub-id pub-id-type="pmid">11297418</pub-id></citation></ref>
<ref id="b79-ijms-10-01314"><label>79.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Qin</surname><given-names>Z</given-names></name><name><surname>Hu</surname><given-names>D</given-names></name><name><surname>Zhu</surname><given-names>M</given-names></name><name><surname>Fink</surname><given-names>AL</given-names></name></person-group><article-title>Structural characterization of the partially folded intermediates of an immunoglobulin light chain leading to amyloid fibrillation and amorphous aggregation</article-title><source>Biochemistry</source><year>2007</year><volume>46</volume><fpage>3521</fpage><lpage>3531</lpage><pub-id pub-id-type="doi">10.1021/bi061716v</pub-id><pub-id pub-id-type="pmid">17315948</pub-id></citation></ref>
<ref id="b80-ijms-10-01314"><label>80.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kumar</surname><given-names>S</given-names></name><name><surname>Mohanty</surname><given-names>SK</given-names></name><name><surname>Udgaonkar</surname><given-names>JB</given-names></name></person-group><article-title>Mechanism of formation of amyloid protofibrils of barstar from soluble oligomers: evidence for multiple steps and lateral association coupled to conformational conversion</article-title><source>J. Mol. Biol</source><year>2007</year><volume>367</volume><fpage>1186</fpage><lpage>11204</lpage><pub-id pub-id-type="doi">10.1016/j.jmb.2007.01.039</pub-id><pub-id pub-id-type="pmid">17292913</pub-id></citation></ref>
<ref id="b81-ijms-10-01314"><label>81.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Khodarahmi</surname><given-names>R</given-names></name><name><surname>Beyrami</surname><given-names>M</given-names></name><name><surname>Soori</surname><given-names>H</given-names></name></person-group><article-title>Appraisal of casein's inhibitory effects on aggregation accompanying carbonic anhydrase refolding and heat-induced ovalbumin fibrillogenesis</article-title><source>Arch. Biochem. Biophys</source><year>2008</year><volume>477</volume><fpage>67</fpage><lpage>76</lpage><pub-id pub-id-type="doi">10.1016/j.abb.2008.04.028</pub-id><pub-id pub-id-type="pmid">18485276</pub-id></citation></ref>
<ref id="b82-ijms-10-01314"><label>82.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Andreasi Bassi</surname><given-names>F</given-names></name><name><surname>Arcovito</surname><given-names>G</given-names></name><name><surname>De Spirito</surname><given-names>M</given-names></name><name><surname>Mordente</surname><given-names>A</given-names></name><name><surname>Martorana</surname><given-names>GE</given-names></name></person-group><article-title>Self-similarity properties of alpha-crystallin supramolecular aggregates</article-title><source>Biophys. J</source><year>1995</year><volume>69</volume><fpage>2720</fpage><lpage>2727</lpage><pub-id pub-id-type="doi">10.1016/S0006-3495(95)80143-8</pub-id><pub-id pub-id-type="pmid">8599678</pub-id></citation></ref>
<ref id="b83-ijms-10-01314"><label>83.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Bettelheim</surname><given-names>FA</given-names></name><name><surname>Ansari</surname><given-names>R</given-names></name><name><surname>Cheng</surname><given-names>QF</given-names></name><name><surname>Zigler</surname><given-names>JS</given-names><suffix>Jr</suffix></name></person-group><article-title>The mode of chaperoning of dithiothreitol-denatured alpha-lactalbumin by alpha-crystallin</article-title><source>Biochem. Biophys. Res. Commun</source><year>1999</year><volume>261</volume><fpage>292</fpage><lpage>297</lpage><pub-id pub-id-type="doi">10.1006/bbrc.1999.1031</pub-id><pub-id pub-id-type="pmid">10425180</pub-id></citation></ref>
<ref id="b84-ijms-10-01314"><label>84.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Schuler</surname><given-names>J</given-names></name><name><surname>Frank</surname><given-names>J</given-names></name><name><surname>Saenger</surname><given-names>W</given-names></name><name><surname>Georgalis</surname><given-names>Y</given-names></name></person-group><article-title>Thermally induced aggregation of human transferrin receptor studied by light-scattering techniques</article-title><source>Biophys. J</source><year>1999</year><volume>77</volume><fpage>1117</fpage><lpage>1125</lpage><pub-id pub-id-type="doi">10.1016/S0006-3495(99)76962-6</pub-id><pub-id pub-id-type="pmid">10423456</pub-id></citation></ref>
<ref id="b85-ijms-10-01314"><label>85.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Modler</surname><given-names>AJ</given-names></name><name><surname>Gast</surname><given-names>K</given-names></name><name><surname>Lutsch</surname><given-names>G</given-names></name><name><surname>Damaschun</surname><given-names>G</given-names></name></person-group><article-title>Assembly of amyloid protofibrils via critical oligomers-a novel pathway of amyloid formation</article-title><source>J. Mol. Biol</source><year>2003</year><volume>325</volume><fpage>135</fpage><lpage>148</lpage><pub-id pub-id-type="doi">10.1016/S0022-2836(02)01175-0</pub-id><pub-id pub-id-type="pmid">12473457</pub-id></citation></ref>
<ref id="b86-ijms-10-01314"><label>86.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Baussay</surname><given-names>K</given-names></name><name><surname>Bon</surname><given-names>CL</given-names></name><name><surname>Nicolai</surname><given-names>T</given-names></name><name><surname>Durand</surname><given-names>D</given-names></name><name><surname>Busnel</surname><given-names>JP</given-names></name></person-group><article-title>Influence of the ionic strength on the heat-induced aggregation of the globular protein beta-lactoglobulin at pH 7</article-title><source>Int. J. Biol. Macromol</source><year>2004</year><volume>34</volume><fpage>21</fpage><lpage>28</lpage><pub-id pub-id-type="doi">10.1016/j.ijbiomac.2003.11.003</pub-id><pub-id pub-id-type="pmid">15178005</pub-id></citation></ref>
<ref id="b87-ijms-10-01314"><label>87.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Follmer</surname><given-names>C</given-names></name><name><surname>Pereira</surname><given-names>FV</given-names></name><name><surname>Da Silveira</surname><given-names>NP</given-names></name><name><surname>Carlini</surname><given-names>CR</given-names></name></person-group><article-title>Jack bean urease (EC 3.5.1.5) aggregation monitored by dynamic and static light scattering</article-title><source>Biophys. Chem</source><year>2004</year><volume>111</volume><fpage>79</fpage><lpage>87</lpage><pub-id pub-id-type="doi">10.1016/j.bpc.2004.03.009</pub-id><pub-id pub-id-type="pmid">15450378</pub-id></citation></ref>
<ref id="b88-ijms-10-01314"><label>88.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Militello</surname><given-names>V</given-names></name><name><surname>Casarino</surname><given-names>C</given-names></name><name><surname>Emanuele</surname><given-names>A</given-names></name><name><surname>Giostra</surname><given-names>A</given-names></name><name><surname>Pullara</surname><given-names>F</given-names></name><name><surname>Leone</surname><given-names>M</given-names></name></person-group><article-title>Aggregation kinetics of bovine serum albumin studied by FTIR spectroscopy and light scattering</article-title><source>Biophys. Chem</source><year>2004</year><volume>107</volume><fpage>175</fpage><lpage>187</lpage><pub-id pub-id-type="doi">10.1016/j.bpc.2003.09.004</pub-id><pub-id pub-id-type="pmid">14962598</pub-id></citation></ref>
<ref id="b89-ijms-10-01314"><label>89.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Marchetti</surname><given-names>S</given-names></name><name><surname>Sbrana</surname><given-names>F</given-names></name><name><surname>Raccis</surname><given-names>R</given-names></name><name><surname>Lanzi</surname><given-names>L</given-names></name><name><surname>Gambi</surname><given-names>CM</given-names></name><name><surname>Vassalli</surname><given-names>M</given-names></name><name><surname>Tiribilli</surname><given-names>B</given-names></name><name><surname>Pacini</surname><given-names>A</given-names></name><name><surname>Toscano</surname><given-names>A</given-names></name></person-group><article-title>Dynamic light scattering and atomic force microscopy imaging on fragments of beta-connectin from human cardiac muscle</article-title><source>Phys Rev E Stat Nonlin Soft Matter Phys</source><year>2008</year><volume>77</volume><fpage>021910:1</fpage><lpage>021910:11</lpage></citation></ref>
<ref id="b90-ijms-10-01314"><label>90.</label><citation citation-type="book"><person-group person-group-type="author"><name><surname>Chu</surname><given-names>B</given-names></name></person-group><source>Laser Light Scattering Basic Principles and Practice</source><publisher-name>Dover Publications, Inc</publisher-name><publisher-loc>Mineola, New York, USA</publisher-loc><year>2007</year></citation></ref>
<ref id="b91-ijms-10-01314"><label>91.</label><citation citation-type="book"><person-group person-group-type="author"><name><surname>Schärtl</surname><given-names>W</given-names></name></person-group><source>Light Scattering from Polymer Solutions and Nanoparticle Dispersions</source><publisher-name>Springer-Verlag</publisher-name><publisher-loc>Berlin, Germany</publisher-loc><year>2007</year></citation></ref>
<ref id="b92-ijms-10-01314"><label>92.</label><citation citation-type="book"><source>International standard ISO 22412:2008(E)</source><publisher-name>Particle size analysis-Dynamic light scattering (DLS); International Organization for Standartization</publisher-name><year>2008</year></citation></ref>
<ref id="b93-ijms-10-01314"><label>93.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Yudin</surname><given-names>IK</given-names></name><name><surname>Nikolaenko</surname><given-names>GL</given-names></name><name><surname>Kosov</surname><given-names>VI</given-names></name><name><surname>Agayan</surname><given-names>VA</given-names></name><name><surname>Anisimov</surname><given-names>MA</given-names></name><name><surname>Sengers</surname><given-names>JV</given-names></name></person-group><article-title>Simple photon-correlation spectrometer for research and education</article-title><source>Int. J. Thermophys</source><year>1997</year><volume>18</volume><fpage>1237</fpage><lpage>1248</lpage><pub-id pub-id-type="doi">10.1007/BF02575258</pub-id></citation></ref>
<ref id="b94-ijms-10-01314"><label>94.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Markossian</surname><given-names>KA</given-names></name><name><surname>Khanova</surname><given-names>HA</given-names></name><name><surname>Kleimenov</surname><given-names>SY</given-names></name><name><surname>Levitsky</surname><given-names>DI</given-names></name><name><surname>Chebotareva</surname><given-names>NA</given-names></name><name><surname>Asryants</surname><given-names>RA</given-names></name><name><surname>Muronetz</surname><given-names>VI</given-names></name><name><surname>Saso</surname><given-names>L</given-names></name><name><surname>Yudin</surname><given-names>IK</given-names></name><name><surname>Kurganov</surname><given-names>BI</given-names></name></person-group><article-title>Mechanism of thermal aggregation of rabbit muscle glyceraldehyde-3-phosphate dehydrogenase</article-title><source>Biochemistry</source><year>2006</year><volume>45</volume><fpage>13375</fpage><lpage>13384</lpage><pub-id pub-id-type="doi">10.1021/bi0610707</pub-id><pub-id pub-id-type="pmid">17073459</pub-id></citation></ref>
<ref id="b95-ijms-10-01314"><label>95.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Khanova</surname><given-names>HA</given-names></name><name><surname>Markossian</surname><given-names>KA</given-names></name><name><surname>Kurganov</surname><given-names>BI</given-names></name><name><surname>Samoilov</surname><given-names>AM</given-names></name><name><surname>Kleimenov</surname><given-names>SY</given-names></name><name><surname>Levitsky</surname><given-names>DI</given-names></name><name><surname>Yudin</surname><given-names>IK</given-names></name><name><surname>Timofeeva</surname><given-names>AC</given-names></name><name><surname>Muranov</surname><given-names>KO</given-names></name><name><surname>Ostrovsky</surname><given-names>MA</given-names></name></person-group><article-title>Mechanism of chaperone-like activity. Suppression of thermal aggregation of beta<sub>L</sub>-crystallin by alpha-crystallin</article-title><source>Biochemistry</source><year>2005</year><volume>44</volume><fpage>15480</fpage><lpage>15487</lpage><pub-id pub-id-type="doi">10.1021/bi051175u</pub-id><pub-id pub-id-type="pmid">16300396</pub-id></citation></ref>
<ref id="b96-ijms-10-01314"><label>96.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Panyukov</surname><given-names>Y</given-names></name><name><surname>Yudin</surname><given-names>I</given-names></name><name><surname>Drachev</surname><given-names>V</given-names></name><name><surname>Dobrov</surname><given-names>E</given-names></name><name><surname>Kurganov</surname><given-names>B</given-names></name></person-group><article-title>The study of amorphous aggregation of tobacco mosaic virus coat protein by dynamic light scattering</article-title><source>Biophys. Chem</source><year>2007</year><volume>127</volume><fpage>9</fpage><lpage>18</lpage><pub-id pub-id-type="doi">10.1016/j.bpc.2006.11.006</pub-id><pub-id pub-id-type="pmid">17182167</pub-id></citation></ref>
<ref id="b97-ijms-10-01314"><label>97.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Meremyanin</surname><given-names>AV</given-names></name><name><surname>Eronina</surname><given-names>TB</given-names></name><name><surname>Chebotareva</surname><given-names>NA</given-names></name><name><surname>Kurganov</surname><given-names>BI</given-names></name></person-group><article-title>Kinetics of thermal aggregation of glycogen phosphorylase <italic>b</italic> from rabbit skeletal muscle. Mechanism of protective action of alpha-crystallin</article-title><source>Biopolymers</source><year>2008</year><volume>89</volume><fpage>124</fpage><lpage>134</lpage><pub-id pub-id-type="doi">10.1002/bip.20872</pub-id><pub-id pub-id-type="pmid">17941008</pub-id></citation></ref>
<ref id="b98-ijms-10-01314"><label>98.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Weitz</surname><given-names>DA</given-names></name><name><surname>Huang</surname><given-names>JS</given-names></name><name><surname>Lin</surname><given-names>MY</given-names></name><name><surname>Sung</surname><given-names>J</given-names></name></person-group><article-title>Limits of the fractal dimension for irreversible kinetic aggregation of gold colloids</article-title><source>Phys. Rev. Lett</source><year>1985</year><volume>54</volume><fpage>1416</fpage><lpage>1419</lpage><pub-id pub-id-type="doi">10.1103/PhysRevLett.54.1416</pub-id><pub-id pub-id-type="pmid">10031026</pub-id></citation></ref>
<ref id="b99-ijms-10-01314"><label>99.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Weitz</surname><given-names>DA</given-names></name><name><surname>Lin</surname><given-names>MY</given-names></name></person-group><article-title>Dynamic scaling of cluster-mass distributions in kinetic colloid aggregation</article-title><source>Phys. Rev. Lett</source><year>1986</year><volume>57</volume><fpage>2037</fpage><lpage>2040</lpage><pub-id pub-id-type="doi">10.1103/PhysRevLett.57.2037</pub-id><pub-id pub-id-type="pmid">10033616</pub-id></citation></ref>
<ref id="b100-ijms-10-01314"><label>100.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Lin</surname><given-names>MY</given-names></name><name><surname>Lindsay</surname><given-names>HM</given-names></name><name><surname>Weitz</surname><given-names>DA</given-names></name><name><surname>Ball</surname><given-names>RC</given-names></name><name><surname>Klein</surname><given-names>R</given-names></name><name><surname>Meakin</surname><given-names>P</given-names></name></person-group><article-title>Universality in colloid aggregation</article-title><source>Nature</source><year>1989</year><volume>939</volume><fpage>360</fpage><lpage>362</lpage></citation></ref>
<ref id="b101-ijms-10-01314"><label>101.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Lin</surname><given-names>MY</given-names></name><name><surname>Lindsay</surname><given-names>HM</given-names></name><name><surname>Weitz</surname><given-names>DA</given-names></name><name><surname>Ball</surname><given-names>RC</given-names></name><name><surname>Klein</surname><given-names>R</given-names></name><name><surname>Meakin</surname><given-names>P</given-names></name></person-group><article-title>Universal reaction-limited colloid aggregation</article-title><source>Phys. Rev. A</source><year>1990</year><volume>41</volume><fpage>2005</fpage><lpage>2020</lpage><pub-id pub-id-type="doi">10.1103/PhysRevA.41.2005</pub-id><pub-id pub-id-type="pmid">9903311</pub-id></citation></ref>
<ref id="b102-ijms-10-01314"><label>102.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Lu</surname><given-names>PJ</given-names></name><name><surname>Zaccarelli</surname><given-names>E</given-names></name><name><surname>Ciulla</surname><given-names>F</given-names></name><name><surname>Schofield</surname><given-names>AB</given-names></name><name><surname>Sciortino</surname><given-names>F</given-names></name><name><surname>Weitz</surname><given-names>DA</given-names></name></person-group><article-title>Gelation of particles with short-range attraction</article-title><source>Nature</source><year>2008</year><volume>453</volume><fpage>499</fpage><lpage>503</lpage><pub-id pub-id-type="doi">10.1038/nature06931</pub-id><pub-id pub-id-type="pmid">18497820</pub-id></citation></ref>
<ref id="b103-ijms-10-01314"><label>103.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Lin</surname><given-names>MY</given-names></name><name><surname>Lindsay</surname><given-names>HM</given-names></name><name><surname>Weitz</surname><given-names>DA</given-names></name><name><surname>Ball</surname><given-names>RC</given-names></name><name><surname>Klein</surname><given-names>R</given-names></name><name><surname>Meakin</surname><given-names>P</given-names></name></person-group><article-title>Universality of fractal aggregates as probed by light scattering</article-title><source>Proc. R. Soc. Lond. A</source><year>1989</year><volume>423</volume><fpage>71</fpage><lpage>87</lpage><pub-id pub-id-type="doi">10.1098/rspa.1989.0042</pub-id></citation></ref>
<ref id="b104-ijms-10-01314"><label>104.</label><citation citation-type="book"><person-group person-group-type="author"><name><surname>Creighton</surname><given-names>TE</given-names></name></person-group><source>Proteins Structures and Molecular Properties</source><publisher-name>Freeman</publisher-name><publisher-name>W.H. and Co.</publisher-name><publisher-loc>New York, USA</publisher-loc><year>1993</year></citation></ref>
<ref id="b105-ijms-10-01314"><label>105.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Keresztes-Nagy</surname><given-names>S</given-names></name><name><surname>Klapper</surname><given-names>MH</given-names></name><name><surname>Lazer</surname><given-names>L</given-names></name><name><surname>Klotz</surname><given-names>IM</given-names></name></person-group><article-title>Hybridization experiments: evidence of dissociation equilibrium in hemerythrin</article-title><source>Science</source><year>1965</year><volume>150</volume><fpage>357</fpage><lpage>359</lpage><pub-id pub-id-type="doi">10.1126/science.150.3694.357</pub-id><pub-id pub-id-type="pmid">5833791</pub-id></citation></ref>
<ref id="b106-ijms-10-01314"><label>106.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Winklmair</surname><given-names>D</given-names></name></person-group><article-title>A simple approach to the theory of cooperative aggregation of biological macromolecules</article-title><source>Arch. Biochem. Biophys</source><year>1971</year><volume>147</volume><fpage>509</fpage><lpage>514</lpage><pub-id pub-id-type="doi">10.1016/0003-9861(71)90408-5</pub-id><pub-id pub-id-type="pmid">5136099</pub-id></citation></ref>
<ref id="b107-ijms-10-01314"><label>107.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Chebotareva</surname><given-names>NA</given-names></name><name><surname>Meremyanin</surname><given-names>AV</given-names></name><name><surname>Makeeva</surname><given-names>VF</given-names></name><name><surname>Livanova</surname><given-names>NB</given-names></name><name><surname>Kurganov</surname><given-names>BI</given-names></name></person-group><article-title>Cooperative self-association of phosphorylase kinase from rabbit skeletal muscle</article-title><source>Biophys. Chem</source><year>2008</year><volume>133</volume><fpage>45</fpage><lpage>53</lpage><pub-id pub-id-type="doi">10.1016/j.bpc.2007.12.001</pub-id><pub-id pub-id-type="pmid">18164537</pub-id></citation></ref>
<ref id="b108-ijms-10-01314"><label>108.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Berka</surname><given-names>M</given-names></name><name><surname>Rice</surname><given-names>JA</given-names></name></person-group><article-title>Relation between aggregation kinetics and the structure of kaolinite aggregates</article-title><source>Langmuir</source><year>2005</year><volume>21</volume><fpage>1223</fpage><lpage>1229</lpage><pub-id pub-id-type="doi">10.1021/la0478853</pub-id><pub-id pub-id-type="pmid">15697264</pub-id></citation></ref>
<ref id="b109-ijms-10-01314"><label>109.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Golub</surname><given-names>NV</given-names></name><name><surname>Markossian</surname><given-names>KA</given-names></name><name><surname>Sholukh</surname><given-names>MV</given-names></name><name><surname>Muranov</surname><given-names>KO</given-names></name><name><surname>Kurganov</surname><given-names>BI</given-names></name></person-group><article-title>Study of kinetics of thermal aggregation of mitochondrial aspartate aminotransferase by dynamic light scattering: protective effect of alpha-crystallin</article-title><source>Eur Biophys J</source><year>2009</year><comment>doi:10.1007/s00249-009-0403-7</comment></citation></ref>
<ref id="b110-ijms-10-01314"><label>110.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Golub</surname><given-names>NV</given-names></name><name><surname>Markossian</surname><given-names>KA</given-names></name><name><surname>Kasilovich</surname><given-names>NV</given-names></name><name><surname>Sholukh</surname><given-names>MV</given-names></name><name><surname>Orlov</surname><given-names>VN</given-names></name><name><surname>Kurganov</surname><given-names>BI</given-names></name></person-group><article-title>Thermal inactivation, denaturation and aggregation of mitochondrial aspartate aminotransferase</article-title><source>Biophys. Chem</source><year>2008</year><volume>135</volume><fpage>125</fpage><lpage>131</lpage><pub-id pub-id-type="doi">10.1016/j.bpc.2008.04.001</pub-id><pub-id pub-id-type="pmid">18440694</pub-id></citation></ref>
<ref id="b111-ijms-10-01314"><label>111.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Eronina</surname><given-names>TB</given-names></name><name><surname>Chebotareva</surname><given-names>NA</given-names></name><name><surname>Bazhina</surname><given-names>SG</given-names></name><name><surname>Makeeva</surname><given-names>VF</given-names></name><name><surname>Kleymenov</surname><given-names>SY</given-names></name><name><surname>Kurganov</surname><given-names>BI</given-names></name></person-group><article-title>Effect of proline on thermal inactivation, denaturation and aggregation of glycogen phosphorylase <italic>b</italic> from rabbit skeletal muscle</article-title><source>Biophys. Chem</source><year>2009</year><volume>141</volume><fpage>66</fpage><lpage>74</lpage><pub-id pub-id-type="doi">10.1016/j.bpc.2008.12.007</pub-id><pub-id pub-id-type="pmid">19155119</pub-id></citation></ref>
<ref id="b112-ijms-10-01314"><label>112.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Meremyanin</surname><given-names>AV</given-names></name><name><surname>Eronina</surname><given-names>TB</given-names></name><name><surname>Chebotareva</surname><given-names>NA</given-names></name><name><surname>Kleimenov</surname><given-names>SY</given-names></name><name><surname>Yudin</surname><given-names>IK</given-names></name><name><surname>Muranov</surname><given-names>KO</given-names></name><name><surname>Ostrovsky</surname><given-names>MA</given-names></name><name><surname>Kurganov</surname><given-names>BI</given-names></name></person-group><article-title>Effect of alpha-crystallin on thermal aggregation of glycogen phosphorylase <italic>b</italic> from rabbit skeletal muscle</article-title><source>Biochemistry (Mosc)</source><year>2007</year><volume>72</volume><fpage>518</fpage><lpage>528</lpage><pub-id pub-id-type="doi">10.1134/S0006297907050082</pub-id></citation></ref>
<ref id="b113-ijms-10-01314"><label>113.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Golub</surname><given-names>N</given-names></name><name><surname>Meremyanin</surname><given-names>A</given-names></name><name><surname>Markossian</surname><given-names>K</given-names></name><name><surname>Eronina</surname><given-names>T</given-names></name><name><surname>Chebotareva</surname><given-names>N</given-names></name><name><surname>Asryants</surname><given-names>R</given-names></name><name><surname>Muronets</surname><given-names>V</given-names></name><name><surname>Kurganov</surname><given-names>B</given-names></name></person-group><article-title>Evidence for the formation of start aggregates as an initial stage of protein aggregation</article-title><source>FEBS Lett</source><year>2007</year><volume>581</volume><fpage>4223</fpage><lpage>4227</lpage><pub-id pub-id-type="doi">10.1016/j.febslet.2007.07.066</pub-id><pub-id pub-id-type="pmid">17706198</pub-id></citation></ref>
<ref id="b114-ijms-10-01314"><label>114.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Sluzky</surname><given-names>V</given-names></name><name><surname>Tamada</surname><given-names>JA</given-names></name><name><surname>Klibanov</surname><given-names>AM</given-names></name><name><surname>Langer</surname><given-names>R</given-names></name></person-group><article-title>Kinetics of insulin aggregation in aqueous solutions upon agitation in the presence of hydrophobic surfaces</article-title><source>Proc. Natl. Acad. Sci. USA</source><year>1991</year><volume>88</volume><fpage>9377</fpage><lpage>9381</lpage><pub-id pub-id-type="doi">10.1073/pnas.88.21.9377</pub-id><pub-id pub-id-type="pmid">1946348</pub-id></citation></ref>
<ref id="b115-ijms-10-01314"><label>115.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Pouzot</surname><given-names>M</given-names></name><name><surname>Nicolai</surname><given-names>T</given-names></name><name><surname>Durand</surname><given-names>D</given-names></name><name><surname>Benyahia</surname><given-names>L</given-names></name></person-group><article-title>Structure factor and elasticity of a heat-set globular protein gel</article-title><source>Macromolecules</source><year>2004</year><volume>37</volume><fpage>614</fpage><lpage>620</lpage><pub-id pub-id-type="doi">10.1021/ma035117x</pub-id></citation></ref>
<ref id="b116-ijms-10-01314"><label>116.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Mehalebi</surname><given-names>S</given-names></name><name><surname>Nicolai</surname><given-names>T</given-names></name><name><surname>Durand</surname><given-names>D</given-names></name></person-group><article-title>Light scattering study of heat-denatured globular protein aggregates</article-title><source>Int. J. Biol. Macromol</source><year>2008</year><volume>43</volume><fpage>129</fpage><lpage>135</lpage><pub-id pub-id-type="doi">10.1016/j.ijbiomac.2008.04.002</pub-id><pub-id pub-id-type="pmid">18485470</pub-id></citation></ref>
<ref id="b117-ijms-10-01314"><label>117.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>de la Fuente</surname><given-names>MA</given-names></name><name><surname>Singh</surname><given-names>H</given-names></name><name><surname>Hemar</surname><given-names>Y</given-names></name></person-group><article-title>Recent advances in the characterization of heat-induced aggregates and intermediates of whey proteins</article-title><source>Trends Food Sci. Technol</source><year>2002</year><volume>13</volume><fpage>262</fpage><lpage>274</lpage><pub-id pub-id-type="doi">10.1016/S0924-2244(02)00133-4</pub-id></citation></ref>
<ref id="b118-ijms-10-01314"><label>118.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Durand</surname><given-names>D</given-names></name><name><surname>Gimel</surname><given-names>JC</given-names></name><name><surname>Nicolai</surname><given-names>T</given-names></name></person-group><article-title>Aggregation, gelation and phase separation of heat denatured globular proteins</article-title><source>Physica A</source><year>2002</year><volume>304</volume><fpage>253</fpage><lpage>265</lpage><pub-id pub-id-type="doi">10.1016/S0378-4371(01)00514-3</pub-id></citation></ref>
<ref id="b119-ijms-10-01314"><label>119.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Turoverov</surname><given-names>KK</given-names></name><name><surname>Biktashev</surname><given-names>AG</given-names></name><name><surname>Khaitlina</surname><given-names>SY</given-names></name><name><surname>Kuznetsova</surname><given-names>IM</given-names></name></person-group><article-title>The structure and dynamics of partially folded actin</article-title><source>Biochemistry</source><year>1999</year><volume>38</volume><fpage>6261</fpage><lpage>6269</lpage><pub-id pub-id-type="doi">10.1021/bi9900976</pub-id><pub-id pub-id-type="pmid">10320355</pub-id></citation></ref>
<ref id="b120-ijms-10-01314"><label>120.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ball</surname><given-names>RC</given-names></name><name><surname>Weitz</surname><given-names>DA</given-names></name><name><surname>Witten</surname><given-names>TA</given-names></name><name><surname>Leyvraz</surname><given-names>F</given-names></name></person-group><article-title>Universal kinetics in reaction-limited aggregation</article-title><source>Phys. Rev. Lett</source><year>1987</year><volume>58</volume><fpage>274</fpage><lpage>277</lpage><pub-id pub-id-type="doi">10.1103/PhysRevLett.58.274</pub-id><pub-id pub-id-type="pmid">10034887</pub-id></citation></ref>
<ref id="b121-ijms-10-01314"><label>121.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Khanova</surname><given-names>HA</given-names></name><name><surname>Markossian</surname><given-names>KA</given-names></name><name><surname>Kleimenov</surname><given-names>SY</given-names></name><name><surname>Levitsky</surname><given-names>DI</given-names></name><name><surname>Chebotareva</surname><given-names>NA</given-names></name><name><surname>Golub</surname><given-names>NV</given-names></name><name><surname>Asryants</surname><given-names>RA</given-names></name><name><surname>Muronetz</surname><given-names>VI</given-names></name><name><surname>Saso</surname><given-names>L</given-names></name><name><surname>Yudin</surname><given-names>IK</given-names></name><name><surname>Muranov</surname><given-names>KO</given-names></name><name><surname>Ostrovsky</surname><given-names>MA</given-names></name><name><surname>Kurganov</surname><given-names>BI</given-names></name></person-group><article-title>Effect of alpha-crystallin on thermal denaturation and aggregation of rabbit muscle glyceraldehyde-3-phosphate dehydrogenase</article-title><source>Biophys. Chem</source><year>2007</year><volume>125</volume><fpage>521</fpage><lpage>531</lpage><pub-id pub-id-type="doi">10.1016/j.bpc.2006.11.002</pub-id><pub-id pub-id-type="pmid">17229514</pub-id></citation></ref>
<ref id="b122-ijms-10-01314"><label>122.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Rajaraman</surname><given-names>K</given-names></name><name><surname>Raman</surname><given-names>B</given-names></name><name><surname>Ramakrishna</surname><given-names>T</given-names></name><name><surname>Rao</surname><given-names>CM</given-names></name></person-group><article-title>Interaction of human recombinant alphaA- and alphaB-crystallins with early and late unfolding intermediates of citrate synthase on its thermal denaturation</article-title><source>FEBS Lett</source><year>2001</year><volume>497</volume><fpage>118</fpage><lpage>123</lpage><pub-id pub-id-type="doi">10.1016/S0014-5793(01)02451-6</pub-id><pub-id pub-id-type="pmid">11377425</pub-id></citation></ref>
<ref id="b123-ijms-10-01314"><label>123.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Hook</surname><given-names>DW</given-names></name><name><surname>Harding</surname><given-names>JJ</given-names></name></person-group><article-title>Molecular chaperones protect catalase against thermal stress</article-title><source>Eur. J. Biochem</source><year>1997</year><volume>247</volume><fpage>380</fpage><lpage>385</lpage><pub-id pub-id-type="doi">10.1111/j.1432-1033.1997.00380.x</pub-id><pub-id pub-id-type="pmid">9249050</pub-id></citation></ref>
<ref id="b124-ijms-10-01314"><label>124.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Marini</surname><given-names>I</given-names></name><name><surname>Moschini</surname><given-names>R</given-names></name><name><surname>Del Corso</surname><given-names>A</given-names></name><name><surname>Mura</surname><given-names>U</given-names></name></person-group><article-title>Complete protection by alpha-crystallin of lens sorbitol dehydrogenase undergoing thermal stress</article-title><source>J. Biol. Chem</source><year>2000</year><volume>275</volume><fpage>32559</fpage><lpage>32565</lpage><pub-id pub-id-type="doi">10.1074/jbc.M006133200</pub-id><pub-id pub-id-type="pmid">10930418</pub-id></citation></ref>
<ref id="b125-ijms-10-01314"><label>125.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Hess</surname><given-names>JF</given-names></name><name><surname>FitzGerald</surname><given-names>PG</given-names></name></person-group><article-title>Protection of a restriction enzyme from heat inactivation by [alpha]-crystallin</article-title><source>Mol. Vis</source><year>1998</year><volume>4</volume><fpage>29</fpage><pub-id pub-id-type="pmid">9873067</pub-id></citation></ref>
<ref id="b126-ijms-10-01314"><label>126.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Zhang</surname><given-names>Y</given-names></name><name><surname>Liu</surname><given-names>X</given-names></name><name><surname>Liu</surname><given-names>J</given-names></name></person-group><article-title>Recombinant human alphaA-crystallin can protect the enzymatic activity of CpUDG against thermal inactivation</article-title><source>FEBS Lett</source><year>2005</year><volume>579</volume><fpage>2897</fpage><lpage>2900</lpage><pub-id pub-id-type="doi">10.1016/j.febslet.2005.04.043</pub-id><pub-id pub-id-type="pmid">15878551</pub-id></citation></ref>
<ref id="b127-ijms-10-01314"><label>127.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Markossian</surname><given-names>KA</given-names></name><name><surname>Golub</surname><given-names>NV</given-names></name><name><surname>Kleymenov</surname><given-names>SY</given-names></name><name><surname>Muranov</surname><given-names>KO</given-names></name><name><surname>Sholukh</surname><given-names>MV</given-names></name><name><surname>Kurganov</surname><given-names>BI</given-names></name></person-group><article-title>Effect of α-crystallin on thermostability of mitochondrial aspartate aminotransferase</article-title><source>Int J Biol Macromol</source><year>2009</year><comment>in press</comment></citation></ref>
<ref id="b128-ijms-10-01314"><label>128.</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Markossian</surname><given-names>KA</given-names></name><name><surname>Golub</surname><given-names>NV</given-names></name><name><surname>Khanova</surname><given-names>HA</given-names></name><name><surname>Levitsky</surname><given-names>DI</given-names></name><name><surname>Poliansky</surname><given-names>NB</given-names></name><name><surname>Muranov</surname><given-names>KO</given-names></name><name><surname>Kurganov</surname><given-names>BI</given-names></name></person-group><article-title>Mechanism of thermal aggregation of yeast alcohol dehydrogenase I. Role of intramolecular chaperone</article-title><source>Biochim. Biophys. Acta</source><year>2008</year><volume>1784</volume><fpage>1286</fpage><lpage>1293</lpage><pub-id pub-id-type="doi">10.1016/j.bbapap.2008.04.030</pub-id><pub-id pub-id-type="pmid">18515108</pub-id></citation></ref></ref-list>
<sec sec-type="display-objects">
<title>Figures</title>
<fig id="f1-ijms-10-01314" position="float">
<label>Figure 1.</label>
<caption>
<p>Kinetics of thermal aggregation of GAPDH (0.4 mg/mL) at 55 <bold>°</bold>C (10 mM Na-phosphate buffer, pH 7.5). The dependences of the light scattering intensity on time obtained at various concentrations of the enzyme: (1) 0.05, (2) 0.2, (3) 0.3 and (4) 0.4 mg/mL.</p></caption>
<graphic xlink:href="ijms-10-01314f1.gif"/></fig>
<fig id="f2-ijms-10-01314" position="float">
<label>Figure 2.</label>
<caption>
<p>Analysis of thermal aggregation of GAPDH (0.4 mg/mL) at 55 C by DLS. Distribution of the protein aggregates by size for aggregation of GAPDH at varioustimes of incubation: (1) 5, (2) 10, (3) 20 (4) 30 and (5) 70 min.</p></caption>
<graphic xlink:href="ijms-10-01314f2.gif"/></fig>
<fig id="f3-ijms-10-01314" position="float">
<label>Figure 3.</label>
<caption>
<p>Kinetics of thermal aggregation of GAPDH (0.4 mg/mL) at 55 °C. The dependences of the hydrodynamic radius of the protein aggregates (<italic>R</italic><sub>h</sub>) on time obtained at various concentrations of the enzyme: (1) 0.05, (2) 0.2, (3) 0.3 and (4) 0.4 mg/mL. (A) Full kinetic curves. The solid curves are calculated from <xref ref-type="disp-formula" rid="FD8">Equation (8)</xref>. (B) The initial parts of the dependences of <italic>R</italic><sub>h</sub> on time. The solid lines were calculated from <xref ref-type="disp-formula" rid="FD9">Equation (9)</xref>. The horizontal dotted line corresponds to the <italic>R</italic><sub>h,0</sub> value (<italic>R</italic><sub>h,0</sub> = 22 nm).</p></caption>
<graphic xlink:href="ijms-10-01314f3.gif"/></fig>
<fig id="f4-ijms-10-01314" position="float">
<label>Figure 4.</label>
<caption>
<p>Kinetics of thermal aggregation of GAPDH (0.4 mg/mL) at 55 °C. Light scattering intensity versus <italic>R</italic><sub>h</sub> plots constructed for various concentrations of the enzyme: (1) 0.05, (2) 0.2, (3) 0.3 and (4) 0.4 mg/mL.</p></caption>
<graphic xlink:href="ijms-10-01314f4.gif"/></fig>
<fig id="f5-ijms-10-01314" position="float">
<label>Figure 5.</label>
<caption>
<p>Thermal aggregation of mAAT (10 mM Na-phosphate buffer, pH 7.5) at 60 °C. Dependences of the light scattering intensity on time obtained at various concentrations of protein: (1) 0.05, (2) 0.1, (3) 0.2 and (4) 0.4 mg/mL. The upper scale corresponds to the portion of the denatured protein (γ<sub>den</sub>) calculated from the DSC data. Dotted curves are calculated from <xref ref-type="disp-formula" rid="FD8">Equation (8)</xref>. The horizontal dotted lines correspond to the <italic>I</italic><sub>lim</sub> values. The lower panel shows the residuals (Res).</p></caption>
<graphic xlink:href="ijms-10-01314f5.gif"/></fig>
<fig id="f6-ijms-10-01314" position="float">
<label>Figure 6.</label>
<caption>
<p>Dependences of the hydrodynamic radius (<italic>R</italic><sub>h</sub>) of the protein aggregates on time for aggregation of mAAT at 60 <bold>°</bold>C obtained at various protein concentrations: (1) 0.05, (2) 0.1, (3) 0.2 and (4) 0.4 mg/mL. Solid curves were calculated in accordance with <xref ref-type="disp-formula" rid="FD9">Equation (9)</xref>.</p></caption>
<graphic xlink:href="ijms-10-01314f6.gif"/></fig>
<fig id="f7-ijms-10-01314" position="float">
<label>Figure 7.</label>
<caption>
<p>Dependence of the polydispersity index PI calculated according with International standard ISO 22412:2008(E) on time for aggregation of mAAT (0.2 mg/mL) at 60 °C.</p></caption>
<graphic xlink:href="ijms-10-01314f7.gif"/></fig>
<fig id="f8-ijms-10-01314" position="float">
<label>Figure 8.</label>
<caption>
<p>Relationship between the light scattering intensity and hydrodynamic radius of the protein aggregates for aggregation of mAAT at 60 °C. The protein concentrations were as follows: (1) 0.05, (2) 0.1, (3) 0.2 and (4) 0.4 mg/mL.</p></caption>
<graphic xlink:href="ijms-10-01314f8.gif"/></fig>
<fig id="f9-ijms-10-01314" position="float">
<label>Figure 9.</label>
<caption>
<p>Thermal aggregation of GAPDH (1 mg/mL) at 45 <bold>°</bold>C (10 mM Na-phosphate buffer, pH 7.5). Distribution of the particles by size registered at various times of incubation: (A) 3.0, (B) 5.5 and (C) 17.0 min.</p></caption>
<graphic xlink:href="ijms-10-01314f9.gif"/></fig>
<fig id="f10-ijms-10-01314" position="float">
<label>Figure 10.</label>
<caption>
<p>Dependences of the hydrodynamic radius (<italic>R</italic><sub>h</sub>) for the original GAPDH (solid circles) and protein aggregates (open circles) on time for aggregation of GAPDH (1 mg/mL) at 45 <bold>°</bold>C (10 mM Na-phosphate buffer, pH 7.5). The concentration of GAPDH was 1 mg/mL.</p></caption>
<graphic xlink:href="ijms-10-01314f10.gif"/></fig>
<fig id="f11-ijms-10-01314" position="float">
<label>Figure 11.</label>
<caption>
<p>Mechanism of heat-induced aggregation of proteins resulting in formation of the amorphous aggregates.</p></caption>
<graphic xlink:href="ijms-10-01314f11.gif"/></fig>
<fig id="f12-ijms-10-01314" position="float">
<label>Figure 12.</label>
<caption>
<p>Suppression of heat-induced aggregation of mAAT by α-crystallin. The dependences of the light scattering intensity on time for aggregation of mAAT (0.2 mg/mL or 4.4 μM in calculation to monomer) at 60 <bold>°</bold>C (10 mM Na-phosphate buffer, pH 7.5). The concentrations of α-crystallin were as follows: (1) 0, (2) 0.1, (3) 0.15, (4) 0.2 and (5) 0.4 mg/mL or (1) 0, (2) 5, (3) 7.5, (4) 10 and (5) 20 μM (in terms of monomer).</p></caption>
<graphic xlink:href="ijms-10-01314f12.gif"/></fig>
<fig id="f13-ijms-10-01314" position="float">
<label>Figure 13.</label>
<caption>
<p>Distribution of the protein aggregates by size for aggregation of mAAT (0.2 mg/mL) at 60 <bold>°</bold>C in the presence of α-crystallin (0.2 mg/mL). The values of the incubation time were as follows: (A) 100, (B) 200, (C) 300 and (D) 350 min.</p></caption>
<graphic xlink:href="ijms-10-01314f13.gif"/></fig>
<fig id="f14-ijms-10-01314" position="float">
<label>Figure 14.</label>
<caption>
<p>Dependences of hydrodynamic radius (<italic>R</italic><sub>h</sub>) of the protein aggregates on time for aggregation of mAAT (0.2 mg/mL) at 60 <bold>°</bold>C in the presence of α-crystallin. The concentrations of α-crystallin were as follows: (A) 0.1, (B) 0.15, (C) 0.2 and (D) 0.4 mg/mL. Insets in panels A–C show the initial parts of the dependences of <italic>R</italic><sub>h</sub> on time. Solid curves are calculated from <xref ref-type="disp-formula" rid="FD11">Equation (11)</xref>. The dotted horizontal lines correspond to the <italic>R</italic><sub>h,0</sub> values. At rather high values of time (<italic>t</italic> &gt; <italic>t</italic><sub>crit</sub>) the population of aggregates is split into two components, which are designated by open and solid circles (panels A–C).</p></caption>
<graphic xlink:href="ijms-10-01314f14.gif"/></fig>
<fig id="f15-ijms-10-01314" position="float">
<label>Figure 15.</label>
<caption>
<p>Relationship between the light scattering intensity and hydrodynamic radius of the protein aggregates for aggregation of mAAT (0.2 mg/mL) at 60 <bold>°</bold>C in the presence of the following concentrations of α-crystallin: (1) 0, (2) 0.1, (3) 0.15, (4) 0.2 and (5) 0.4 mg/mL.</p></caption>
<graphic xlink:href="ijms-10-01314f15.gif"/></fig>
<fig id="f16-ijms-10-01314" position="float">
<label>Figure 16.</label>
<caption>
<p>Mechanism of heat-induced aggregation of proteins in the presence of α-crystallin. Pathways 1 and 2 show aggregation of the protein substrate at relatively low and relatively high concentrations of α-crystallin, respectively.</p></caption>
<graphic xlink:href="ijms-10-01314f16.gif"/></fig>
<fig id="f17-ijms-10-01314" position="float">
<label>Figure 17.</label>
<caption>
<p>Effect of α-crystallin on thermal denaturation of GAPDH (0.4 mg/mL, 10 mM Na-phosphate buffer, pH 7.5). DSC-profiles were obtained in the absence (curve 1) and in the presence of α-crystallin (curves 2–4). The concentrations of α-crystallin are as follows: (1) 0, (2) 0.1, (3) 0.2 and (4) 0.4 mg/mL. Curve 5 represents the DSC profile for α-crystallin (0.4 mg/mL). The heating rate was 1 °C/min.</p></caption>
<graphic xlink:href="ijms-10-01314f17.gif"/></fig>
<fig id="f18-ijms-10-01314" position="float">
<label>Figure 18.</label>
<caption>
<p>Effect of α-crystallin on the kinetics of thermal inactivation of mAAT (0.1 mg/mL) at 65 <bold>°</bold>C (10 mM Na-phosphate buffer, pH 7.5). The dependences of the relative enzymatic activity (<italic>A/A</italic><sub>0</sub>) of mAAT. The concentrations of α-crystallin were as follows: (1) 0, (2) 0.05 and (3) 0.1 mg/mL.</p></caption>
<graphic xlink:href="ijms-10-01314f18.gif"/></fig>
<fig id="f19-ijms-10-01314" position="float">
<label>Figure 19.</label>
<caption>
<p>Effect of α-crystallin on thermal denaturation of mAAT (10 mM Na-phosphate buffer, pH 7.5). Curves 1 and 2 correspond to the DSC profiles of mAAT (1 mg/mL) and α-crystallin (1 mg/mL), respectively. Curve 3 corresponds to the DSC profile for the mixture of mAAT (1 mg/mL) and α-crystallin (1 mg/mL). The heating rate was 1 °C/min.</p></caption>
<graphic xlink:href="ijms-10-01314f19.gif"/></fig>
<fig id="f20-ijms-10-01314" position="float">
<label>Scheme 1.</label>
<caption>
<p>Schematic representation of the possible mechanism explaining the effect of α-crystallin on denaturation of a protein substrate.</p></caption>
<graphic xlink:href="ijms-10-01314f20.gif"/></fig></sec></back></article>
